RNA–Protein interactions for RNA: ENST00000526829.1

VPS11-202, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 1,952 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-202ENST00000526829 GGT6Q6P531 493 aa16.73■□□□□ 0.27
VPS11-202ENST00000526829 DHX29Q7Z478 1369 aaKnown RBP16.73■□□□□ 0.27
VPS11-202ENST00000526829 CCDC141Q6ZP82 1450 aa16.72■□□□□ 0.27
VPS11-202ENST00000526829 CAMSAP2Q08AD1 1489 aa16.72■□□□□ 0.27
VPS11-202ENST00000526829 CEP170BQ9Y4F5 1589 aaPredicted RBP16.72■□□□□ 0.27
VPS11-202ENST00000526829 PLA2R1Q13018 1463 aa16.71■□□□□ 0.27
VPS11-202ENST00000526829 IQSEC2Q5JU85 1478 aa16.71■□□□□ 0.27
VPS11-202ENST00000526829 RTN4Q9NQC3 1192 aaKnown RBP16.71■□□□□ 0.27
VPS11-202ENST00000526829 RSPH4AQ5TD94 716 aa16.69■□□□□ 0.26
VPS11-202ENST00000526829 FAM135AQ9P2D6 1515 aa16.69■□□□□ 0.26
VPS11-202ENST00000526829 ARHGEF5Q12774 1597 aa16.69■□□□□ 0.26
VPS11-202ENST00000526829 TCOF1Q13428 1488 aaKnown RBP16.69■□□□□ 0.26
VPS11-202ENST00000526829 VPS8Q8N3P4 1428 aa16.67■□□□□ 0.26
VPS11-202ENST00000526829 CENPBP07199 599 aaPredicted RBP16.67■□□□□ 0.26
VPS11-202ENST00000526829 PKD2Q13563 968 aa16.67■□□□□ 0.26
VPS11-202ENST00000526829 NCKAP5LQ9HCH0 1330 aa16.67■□□□□ 0.26
VPS11-202ENST00000526829 A2ML1A8K2U0 1454 aa16.66■□□□□ 0.26
VPS11-202ENST00000526829 LRRC9Q6ZRR7 1453 aa16.66■□□□□ 0.26
VPS11-202ENST00000526829 KDM5DQ9BY66 1539 aa16.65■□□□□ 0.26
VPS11-202ENST00000526829 LOC105371045A0A1W2PR82 267 aa16.65■□□□□ 0.26
VPS11-202ENST00000526829 DNMT1P26358 1616 aaKnown RBP16.64■□□□□ 0.26
VPS11-202ENST00000526829 KIF3BO15066 747 aa16.64■□□□□ 0.25
VPS11-202ENST00000526829 PZPP20742 1482 aa16.64■□□□□ 0.25
VPS11-202ENST00000526829 MAP3K1Q13233 1512 aa16.63■□□□□ 0.25
VPS11-202ENST00000526829 MAST1Q9Y2H9 1570 aa16.62■□□□□ 0.25
VPS11-202ENST00000526829 ZNF335Q9H4Z2 1342 aaPredicted RBP16.6■□□□□ 0.25
VPS11-202ENST00000526829 TNRQ92752 1358 aa16.6■□□□□ 0.25
VPS11-202ENST00000526829 RNF17Q9BXT8 1623 aaKnown RBP16.59■□□□□ 0.25
VPS11-202ENST00000526829 TSPY4P0CV99 314 aa16.59■□□□□ 0.25
VPS11-202ENST00000526829 TSPY10P0CW01 314 aa16.59■□□□□ 0.25
VPS11-202ENST00000526829 FBXO31Q5XUX0 539 aaPredicted RBP16.58■□□□□ 0.25
VPS11-202ENST00000526829 POLR1AO95602 1720 aaPredicted RBP16.58■□□□□ 0.24
VPS11-202ENST00000526829 WASHC2CQ9Y4E1 1318 aa16.57■□□□□ 0.24
VPS11-202ENST00000526829 NEURL4Q96JN8 1562 aa16.57■□□□□ 0.24
VPS11-202ENST00000526829 MIA2Q96PC5 1412 aa16.57■□□□□ 0.24
VPS11-202ENST00000526829 EIF2AK4Q9P2K8 1649 aaKnown RBP16.56■□□□□ 0.24
VPS11-202ENST00000526829 KANK4Q5T7N3 995 aaPredicted RBP16.56■□□□□ 0.24
VPS11-202ENST00000526829 MYOM3Q5VTT5 1437 aa16.55■□□□□ 0.24
VPS11-202ENST00000526829 NLRP1Q9C000 1473 aa16.55■□□□□ 0.24
VPS11-202ENST00000526829 ZC3H13Q5T200 1668 aaKnown RBP16.55■□□□□ 0.24
VPS11-202ENST00000526829 ABCC3O15438 1527 aa16.54■□□□□ 0.24
VPS11-202ENST00000526829 MROH1Q8NDA8 1641 aa16.53■□□□□ 0.24
VPS11-202ENST00000526829 DISP3Q9P2K9 1392 aa16.52■□□□□ 0.24
VPS11-202ENST00000526829 SPATA31D1Q6ZQQ2 1576 aa16.52■□□□□ 0.24
VPS11-202ENST00000526829 UGGT1Q9NYU2 1555 aa16.51■□□□□ 0.23
VPS11-202ENST00000526829 DEPDC5O75140 1603 aa16.5■□□□□ 0.23
VPS11-202ENST00000526829 MED14O60244 1454 aa16.5■□□□□ 0.23
VPS11-202ENST00000526829 CPS1P31327 1500 aa16.49■□□□□ 0.23
VPS11-202ENST00000526829 DUOX2Q9NRD8 1548 aa16.49■□□□□ 0.23
VPS11-202ENST00000526829 UBAP1LF5GYI3 381 aa16.49■□□□□ 0.23
VPS11-202ENST00000526829 THEMISQ8N1K5 641 aaPredicted RBP16.49■□□□□ 0.23
VPS11-202ENST00000526829 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.49■□□□□ 0.23
VPS11-202ENST00000526829 PLEKHG5O94827 1062 aa16.48■□□□□ 0.23
VPS11-202ENST00000526829 ANKLE2Q86XL3 938 aa16.48■□□□□ 0.23
VPS11-202ENST00000526829 ARXQ96QS3 562 aa16.48■□□□□ 0.23
VPS11-202ENST00000526829 ERVK-7P63135 1459 aa16.48■□□□□ 0.23
VPS11-202ENST00000526829 SHANK2Q9UPX8 1470 aa16.48■□□□□ 0.23
VPS11-202ENST00000526829 VWDEQ8N2E2 1590 aa16.48■□□□□ 0.23
VPS11-202ENST00000526829 CROCC2H7BZ55 1655 aa16.48■□□□□ 0.23
VPS11-202ENST00000526829 CEP152O94986 1710 aa16.47■□□□□ 0.23
VPS11-202ENST00000526829 ILDR2Q71H61 639 aa16.47■□□□□ 0.23
VPS11-202ENST00000526829 NPHP4O75161 1426 aaPredicted RBP16.46■□□□□ 0.22
VPS11-202ENST00000526829 PTPN23Q9H3S7 1636 aa16.45■□□□□ 0.22
VPS11-202ENST00000526829 ABCC5O15440 1437 aa16.45■□□□□ 0.22
VPS11-202ENST00000526829 ACIN1Q9UKV3 1341 aaKnown RBP16.45■□□□□ 0.22
VPS11-202ENST00000526829 PRDM15P57071 1507 aaPredicted RBP16.45■□□□□ 0.22
VPS11-202ENST00000526829 IQGAP1P46940 1657 aa16.44■□□□□ 0.22
VPS11-202ENST00000526829 UBE2Q2Q8WVN8 375 aa16.44■□□□□ 0.22
VPS11-202ENST00000526829 ERBINQ96RT1 1412 aa16.43■□□□□ 0.22
VPS11-202ENST00000526829 KIF15Q9NS87 1388 aa16.43■□□□□ 0.22
VPS11-202ENST00000526829 UBR1Q8IWV7 1749 aa16.42■□□□□ 0.22
VPS11-202ENST00000526829 ARHGAP31Q2M1Z3 1444 aa16.42■□□□□ 0.22
VPS11-202ENST00000526829 CFAP65Q6ZU64 1925 aaKnown RBP16.41■□□□□ 0.22
VPS11-202ENST00000526829 DAPK1P53355 1430 aa16.4■□□□□ 0.22
VPS11-202ENST00000526829 FGD6Q6ZV73 1430 aa16.4■□□□□ 0.22
VPS11-202ENST00000526829 SOCS7O14512 581 aa16.38■□□□□ 0.21
VPS11-202ENST00000526829 STRCP1A6NGW2 1772 aa16.38■□□□□ 0.21
VPS11-202ENST00000526829 ARHGAP23Q9P227 1491 aa16.38■□□□□ 0.21
VPS11-202ENST00000526829 ALKQ9UM73 1620 aa16.38■□□□□ 0.21
VPS11-202ENST00000526829 TOM1O60784 492 aa16.37■□□□□ 0.21
VPS11-202ENST00000526829 RRP7BPQ9NSQ0 103 aa16.37■□□□□ 0.21
VPS11-202ENST00000526829 SLIT1O75093 1534 aa16.37■□□□□ 0.21
VPS11-202ENST00000526829 SYNMO15061 1565 aa16.36■□□□□ 0.21
VPS11-202ENST00000526829 SCAF11Q99590 1463 aaKnown RBP16.36■□□□□ 0.21
VPS11-202ENST00000526829 LMTK2Q8IWU2 1503 aa16.35■□□□□ 0.21
VPS11-202ENST00000526829 LRRC7Q96NW7 1537 aa16.34■□□□□ 0.21
VPS11-202ENST00000526829 HSPA1LP34931 641 aa16.34■□□□□ 0.21
VPS11-202ENST00000526829 ANKRD30AQ9BXX3 1397 aa16.34■□□□□ 0.21
VPS11-202ENST00000526829 PIK3C2BO00750 1634 aa16.33■□□□□ 0.2
VPS11-202ENST00000526829 PIP4K2BP78356 416 aa16.33■□□□□ 0.2
VPS11-202ENST00000526829 KDM5AP29375 1690 aaKnown RBP16.32■□□□□ 0.2
VPS11-202ENST00000526829 KANK1Q14678 1352 aa16.32■□□□□ 0.2
VPS11-202ENST00000526829 LTKP29376 864 aa16.31■□□□□ 0.2
VPS11-202ENST00000526829 ADGRL2O95490 1459 aa16.31■□□□□ 0.2
VPS11-202ENST00000526829 NEUROD1Q13562 356 aa16.31■□□□□ 0.2
VPS11-202ENST00000526829 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.31■□□□□ 0.2
VPS11-202ENST00000526829 AMER1Q5JTC6 1135 aaPredicted RBP16.29■□□□□ 0.2
VPS11-202ENST00000526829 TXNDC2Q86VQ3 553 aa16.29■□□□□ 0.2
VPS11-202ENST00000526829 PODXL2Q9NZ53 605 aa16.29■□□□□ 0.2
VPS11-202ENST00000526829 CHIC2Q9UKJ5 165 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms