RNA–Protein interactions for RNA: ENST00000526639.2

SNRNP35-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP35, Length 1,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-203ENST00000526639 WASHC2CQ9Y4E1 1318 aa17.17■□□□□ 0.34
SNRNP35-203ENST00000526639 UHRF1BP1Q6BDS2 1440 aa17.17■□□□□ 0.34
SNRNP35-203ENST00000526639 SETD1BQ9UPS6 1966 aaKnown RBP17.17■□□□□ 0.34
SNRNP35-203ENST00000526639 MROH2AA6NES4 1674 aa17.16■□□□□ 0.34
SNRNP35-203ENST00000526639 DNMT1P26358 1616 aaKnown RBP17.16■□□□□ 0.34
SNRNP35-203ENST00000526639 CROCC2H7BZ55 1655 aa17.15■□□□□ 0.34
SNRNP35-203ENST00000526639 KIF15Q9NS87 1388 aa17.15■□□□□ 0.34
SNRNP35-203ENST00000526639 SHANK2Q9UPX8 1470 aa17.14■□□□□ 0.33
SNRNP35-203ENST00000526639 FBXO31Q5XUX0 539 aaPredicted RBP17.12■□□□□ 0.33
SNRNP35-203ENST00000526639 DUOX2Q9NRD8 1548 aa17.12■□□□□ 0.33
SNRNP35-203ENST00000526639 NPATQ14207 1427 aa17.11■□□□□ 0.33
SNRNP35-203ENST00000526639 PTPRKQ15262 1439 aa17.11■□□□□ 0.33
SNRNP35-203ENST00000526639 KDM5DQ9BY66 1539 aa17.11■□□□□ 0.33
SNRNP35-203ENST00000526639 ANKRD30AQ9BXX3 1397 aa17.1■□□□□ 0.33
SNRNP35-203ENST00000526639 NCOA1Q15788 1441 aa17.09■□□□□ 0.33
SNRNP35-203ENST00000526639 ITGAEP38570 1179 aa17.08■□□□□ 0.33
SNRNP35-203ENST00000526639 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.08■□□□□ 0.33
SNRNP35-203ENST00000526639 EIF2AK4Q9P2K8 1649 aaKnown RBP17.08■□□□□ 0.32
SNRNP35-203ENST00000526639 RNF17Q9BXT8 1623 aaKnown RBP17.07■□□□□ 0.32
SNRNP35-203ENST00000526639 ERBINQ96RT1 1412 aa17.07■□□□□ 0.32
SNRNP35-203ENST00000526639 MROH1Q8NDA8 1641 aa17.05■□□□□ 0.32
SNRNP35-203ENST00000526639 PZPP20742 1482 aa17.05■□□□□ 0.32
SNRNP35-203ENST00000526639 ABCC3O15438 1527 aa17.04■□□□□ 0.32
SNRNP35-203ENST00000526639 MYO3AQ8NEV4 1616 aa17.04■□□□□ 0.32
SNRNP35-203ENST00000526639 STRCQ7RTU9 1775 aa17.04■□□□□ 0.32
SNRNP35-203ENST00000526639 FAM135AQ9P2D6 1515 aa17.03■□□□□ 0.32
SNRNP35-203ENST00000526639 ADGRL2O95490 1459 aa17.03■□□□□ 0.32
SNRNP35-203ENST00000526639 TNRQ92752 1358 aa17.02■□□□□ 0.31
SNRNP35-203ENST00000526639 CEP152O94986 1710 aa17.02■□□□□ 0.31
SNRNP35-203ENST00000526639 CEP170BQ9Y4F5 1589 aaPredicted RBP17.01■□□□□ 0.31
SNRNP35-203ENST00000526639 CAMSAP1Q5T5Y3 1602 aa17.01■□□□□ 0.31
SNRNP35-203ENST00000526639 ZC3H13Q5T200 1668 aaKnown RBP17■□□□□ 0.31
SNRNP35-203ENST00000526639 PRDM15P57071 1507 aaPredicted RBP17■□□□□ 0.31
SNRNP35-203ENST00000526639 ANKRD50Q9ULJ7 1429 aa16.99■□□□□ 0.31
SNRNP35-203ENST00000526639 CFAP65Q6ZU64 1925 aaKnown RBP16.99■□□□□ 0.31
SNRNP35-203ENST00000526639 DMRT2Q9Y5R5 561 aa16.99■□□□□ 0.31
SNRNP35-203ENST00000526639 NCKAP5LQ9HCH0 1330 aa16.99■□□□□ 0.31
SNRNP35-203ENST00000526639 ZNF142P52746 1687 aaPredicted RBP16.98■□□□□ 0.31
SNRNP35-203ENST00000526639 KANK1Q14678 1352 aa16.98■□□□□ 0.31
SNRNP35-203ENST00000526639 DEPDC5O75140 1603 aa16.97■□□□□ 0.31
SNRNP35-203ENST00000526639 A2ML1A8K2U0 1454 aa16.97■□□□□ 0.31
SNRNP35-203ENST00000526639 ILDR1Q86SU0 546 aaPredicted RBP16.97■□□□□ 0.31
SNRNP35-203ENST00000526639 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.95■□□□□ 0.3
SNRNP35-203ENST00000526639 ERVK-7P63135 1459 aa16.94■□□□□ 0.3
SNRNP35-203ENST00000526639 RRBP1Q9P2E9 1410 aaKnown RBP16.94■□□□□ 0.3
SNRNP35-203ENST00000526639 ROCK1Q13464 1354 aa16.93■□□□□ 0.3
SNRNP35-203ENST00000526639 SPATA31D1Q6ZQQ2 1576 aa16.93■□□□□ 0.3
SNRNP35-203ENST00000526639 NLRP1Q9C000 1473 aa16.92■□□□□ 0.3
SNRNP35-203ENST00000526639 ARHGAP31Q2M1Z3 1444 aa16.92■□□□□ 0.3
SNRNP35-203ENST00000526639 PLA2R1Q13018 1463 aa16.91■□□□□ 0.3
SNRNP35-203ENST00000526639 THEMISQ8N1K5 641 aaPredicted RBP16.91■□□□□ 0.3
SNRNP35-203ENST00000526639 PTPRTO14522 1441 aa16.91■□□□□ 0.3
SNRNP35-203ENST00000526639 VWDEQ8N2E2 1590 aa16.91■□□□□ 0.3
SNRNP35-203ENST00000526639 UGGT1Q9NYU2 1555 aa16.91■□□□□ 0.3
SNRNP35-203ENST00000526639 PKD2Q13563 968 aa16.91■□□□□ 0.3
SNRNP35-203ENST00000526639 LMTK2Q8IWU2 1503 aa16.89■□□□□ 0.29
SNRNP35-203ENST00000526639 CERKQ8TCT0 537 aa16.88■□□□□ 0.29
SNRNP35-203ENST00000526639 MSH5O43196 834 aa16.88■□□□□ 0.29
SNRNP35-203ENST00000526639 ANKLE2Q86XL3 938 aa16.86■□□□□ 0.29
SNRNP35-203ENST00000526639 EFCAB6Q5THR3 1501 aa16.86■□□□□ 0.29
SNRNP35-203ENST00000526639 FBXO41Q8TF61 875 aa16.85■□□□□ 0.29
SNRNP35-203ENST00000526639 IDI1Q13907 227 aa16.84■□□□□ 0.29
SNRNP35-203ENST00000526639 ZNF335Q9H4Z2 1342 aaPredicted RBP16.84■□□□□ 0.29
SNRNP35-203ENST00000526639 NUP155O75694 1391 aa16.84■□□□□ 0.29
SNRNP35-203ENST00000526639 UNC13BO14795 1591 aa16.84■□□□□ 0.29
SNRNP35-203ENST00000526639 STAG3Q9UJ98 1225 aa16.84■□□□□ 0.29
SNRNP35-203ENST00000526639 UBR1Q8IWV7 1749 aa16.82■□□□□ 0.28
SNRNP35-203ENST00000526639 NEURL4Q96JN8 1562 aa16.82■□□□□ 0.28
SNRNP35-203ENST00000526639 POLR1AO95602 1720 aaPredicted RBP16.82■□□□□ 0.28
SNRNP35-203ENST00000526639 SYNMO15061 1565 aa16.81■□□□□ 0.28
SNRNP35-203ENST00000526639 NOS1P29475 1434 aa16.81■□□□□ 0.28
SNRNP35-203ENST00000526639 PIK3C2BO00750 1634 aa16.81■□□□□ 0.28
SNRNP35-203ENST00000526639 NAIPQ13075 1403 aa16.8■□□□□ 0.28
SNRNP35-203ENST00000526639 TET3O43151 1660 aa16.8■□□□□ 0.28
SNRNP35-203ENST00000526639 LTKP29376 864 aa16.79■□□□□ 0.28
SNRNP35-203ENST00000526639 LTBP4Q8N2S1 1624 aa16.79■□□□□ 0.28
SNRNP35-203ENST00000526639 RPRD2Q5VT52 1461 aaKnown RBP16.79■□□□□ 0.28
SNRNP35-203ENST00000526639 TXNDC2Q86VQ3 553 aa16.78■□□□□ 0.28
SNRNP35-203ENST00000526639 IQGAP3Q86VI3 1631 aa16.78■□□□□ 0.28
SNRNP35-203ENST00000526639 NPHP4O75161 1426 aaPredicted RBP16.77■□□□□ 0.28
SNRNP35-203ENST00000526639 SLC52A1Q9NWF4 448 aa16.77■□□□□ 0.28
SNRNP35-203ENST00000526639 GCC2Q8IWJ2 1684 aa16.77■□□□□ 0.28
SNRNP35-203ENST00000526639 E9PCH4 1651 aa16.77■□□□□ 0.27
SNRNP35-203ENST00000526639 MED14O60244 1454 aa16.76■□□□□ 0.27
SNRNP35-203ENST00000526639 EID1Q9Y6B2 187 aa16.75■□□□□ 0.27
SNRNP35-203ENST00000526639 HFM1A2PYH4 1435 aa16.75■□□□□ 0.27
SNRNP35-203ENST00000526639 TMEM2Q9UHN6 1383 aa16.74■□□□□ 0.27
SNRNP35-203ENST00000526639 TRIM52Q96A61 297 aa16.74■□□□□ 0.27
SNRNP35-203ENST00000526639 SLIT1O75093 1534 aa16.74■□□□□ 0.27
SNRNP35-203ENST00000526639 SCAF11Q99590 1463 aaKnown RBP16.74■□□□□ 0.27
SNRNP35-203ENST00000526639 ARHGAP23Q9P227 1491 aa16.74■□□□□ 0.27
SNRNP35-203ENST00000526639 CHGAP10645 457 aaKnown RBP16.73■□□□□ 0.27
SNRNP35-203ENST00000526639 IQGAP1P46940 1657 aa16.73■□□□□ 0.27
SNRNP35-203ENST00000526639 ADGRB3O60242 1522 aa16.7■□□□□ 0.26
SNRNP35-203ENST00000526639 KDM5AP29375 1690 aaKnown RBP16.69■□□□□ 0.26
SNRNP35-203ENST00000526639 MYO5BQ9ULV0 1848 aa16.68■□□□□ 0.26
SNRNP35-203ENST00000526639 NUTM2DQ5VT03 806 aaPredicted RBP16.68■□□□□ 0.26
SNRNP35-203ENST00000526639 BCANQ96GW7 911 aa16.67■□□□□ 0.26
SNRNP35-203ENST00000526639 SLC26A8Q96RN1 970 aa16.67■□□□□ 0.26
SNRNP35-203ENST00000526639 TMEM131LA2VDJ0 1609 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms