RNA–Protein interactions for RNA: ENST00000526606.1

AMBRA1-205, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 4

Gene AMBRA1, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-205ENST00000526606 CPS1P31327 1500 aa32.02■■■□□ 2.72
AMBRA1-205ENST00000526606 MBD5Q9P267 1494 aa32.01■■■□□ 2.71
AMBRA1-205ENST00000526606 POLR1AO95602 1720 aaPredicted RBP32■■■□□ 2.71
AMBRA1-205ENST00000526606 ALKQ9UM73 1620 aa31.99■■■□□ 2.71
AMBRA1-205ENST00000526606 DHX29Q7Z478 1369 aaKnown RBP31.97■■■□□ 2.71
AMBRA1-205ENST00000526606 TNRQ92752 1358 aa31.97■■■□□ 2.71
AMBRA1-205ENST00000526606 VWDEQ8N2E2 1590 aa31.95■■■□□ 2.71
AMBRA1-205ENST00000526606 RTEL1-TNFRSF6BF6WH68 1400 aa31.94■■■□□ 2.7
AMBRA1-205ENST00000526606 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.93■■■□□ 2.7
AMBRA1-205ENST00000526606 ANKLE2Q86XL3 938 aa31.91■■■□□ 2.7
AMBRA1-205ENST00000526606 PZPP20742 1482 aa31.91■■■□□ 2.7
AMBRA1-205ENST00000526606 KIF3BO15066 747 aa31.9■■■□□ 2.7
AMBRA1-205ENST00000526606 MTUS2Q5JR59 1369 aa31.89■■■□□ 2.7
AMBRA1-205ENST00000526606 TIAM1Q13009 1591 aa31.89■■■□□ 2.7
AMBRA1-205ENST00000526606 MED14O60244 1454 aa31.86■■■□□ 2.69
AMBRA1-205ENST00000526606 THEMISQ8N1K5 641 aaPredicted RBP31.86■■■□□ 2.69
AMBRA1-205ENST00000526606 MIA2Q96PC5 1412 aa31.85■■■□□ 2.69
AMBRA1-205ENST00000526606 NPHP4O75161 1426 aaPredicted RBP31.83■■■□□ 2.69
AMBRA1-205ENST00000526606 KDM5DQ9BY66 1539 aa31.83■■■□□ 2.69
AMBRA1-205ENST00000526606 WASHC2CQ9Y4E1 1318 aa31.82■■■□□ 2.68
AMBRA1-205ENST00000526606 PHF23Q9BUL5 403 aaPredicted RBP31.82■■■□□ 2.68
AMBRA1-205ENST00000526606 DEPDC5O75140 1603 aa31.8■■■□□ 2.68
AMBRA1-205ENST00000526606 STRCP1A6NGW2 1772 aa31.79■■■□□ 2.68
AMBRA1-205ENST00000526606 UGGT1Q9NYU2 1555 aa31.79■■■□□ 2.68
AMBRA1-205ENST00000526606 NLRP1Q9C000 1473 aa31.78■■■□□ 2.68
AMBRA1-205ENST00000526606 FAM135AQ9P2D6 1515 aa31.78■■■□□ 2.68
AMBRA1-205ENST00000526606 LRRC7Q96NW7 1537 aa31.75■■■□□ 2.67
AMBRA1-205ENST00000526606 SENP3Q9H4L4 574 aaPredicted RBP31.75■■■□□ 2.67
AMBRA1-205ENST00000526606 CEP162Q5TB80 1403 aa31.74■■■□□ 2.67
AMBRA1-205ENST00000526606 CCDC141Q6ZP82 1450 aa31.72■■■□□ 2.67
AMBRA1-205ENST00000526606 RGS17Q9UGC6 210 aaPredicted RBP31.72■■■□□ 2.67
AMBRA1-205ENST00000526606 IQGAP1P46940 1657 aa31.72■■■□□ 2.67
AMBRA1-205ENST00000526606 EHBP1L1Q8N3D4 1523 aa31.7■■■□□ 2.67
AMBRA1-205ENST00000526606 RSPH4AQ5TD94 716 aa31.66■■■□□ 2.66
AMBRA1-205ENST00000526606 CAMSAP2Q08AD1 1489 aa31.65■■■□□ 2.66
AMBRA1-205ENST00000526606 RNF17Q9BXT8 1623 aaKnown RBP31.62■■■□□ 2.65
AMBRA1-205ENST00000526606 ZC3H13Q5T200 1668 aaKnown RBP31.59■■■□□ 2.65
AMBRA1-205ENST00000526606 NCOA2Q15596 1464 aa31.59■■■□□ 2.65
AMBRA1-205ENST00000526606 SYNMO15061 1565 aa31.58■■■□□ 2.65
AMBRA1-205ENST00000526606 ABCC3O15438 1527 aa31.58■■■□□ 2.65
AMBRA1-205ENST00000526606 ERVK-7P63135 1459 aa31.55■■■□□ 2.64
AMBRA1-205ENST00000526606 ARHGEF5Q12774 1597 aa31.55■■■□□ 2.64
AMBRA1-205ENST00000526606 LTKP29376 864 aa31.54■■■□□ 2.64
AMBRA1-205ENST00000526606 TSPY4P0CV99 314 aa31.53■■■□□ 2.64
AMBRA1-205ENST00000526606 TSPY10P0CW01 314 aa31.53■■■□□ 2.64
AMBRA1-205ENST00000526606 UBR1Q8IWV7 1749 aa31.51■■■□□ 2.63
AMBRA1-205ENST00000526606 XIRP1Q702N8 1843 aaKnown RBP31.51■■■□□ 2.63
AMBRA1-205ENST00000526606 CFAP65Q6ZU64 1925 aaKnown RBP31.49■■■□□ 2.63
AMBRA1-205ENST00000526606 SCAF11Q99590 1463 aaKnown RBP31.48■■■□□ 2.63
AMBRA1-205ENST00000526606 MROH1Q8NDA8 1641 aa31.48■■■□□ 2.63
AMBRA1-205ENST00000526606 POTEAQ6S8J7 498 aa31.46■■■□□ 2.63
AMBRA1-205ENST00000526606 ARHGAP23Q9P227 1491 aa31.46■■■□□ 2.63
AMBRA1-205ENST00000526606 TXNDC2Q86VQ3 553 aa31.45■■■□□ 2.63
AMBRA1-205ENST00000526606 SLIT1O75093 1534 aa31.42■■■□□ 2.62
AMBRA1-205ENST00000526606 MAST1Q9Y2H9 1570 aa31.42■■■□□ 2.62
AMBRA1-205ENST00000526606 FAM135BQ49AJ0 1406 aa31.41■■■□□ 2.62
AMBRA1-205ENST00000526606 CEP152O94986 1710 aa31.41■■■□□ 2.62
AMBRA1-205ENST00000526606 EIF2AK4Q9P2K8 1649 aaKnown RBP31.39■■■□□ 2.62
AMBRA1-205ENST00000526606 ARHGAP31Q2M1Z3 1444 aa31.31■■■□□ 2.6
AMBRA1-205ENST00000526606 EID1Q9Y6B2 187 aa31.3■■■□□ 2.6
AMBRA1-205ENST00000526606 TMEM94Q12767 1356 aa31.3■■■□□ 2.6
AMBRA1-205ENST00000526606 TMEM2Q9UHN6 1383 aa31.28■■■□□ 2.6
AMBRA1-205ENST00000526606 RBM33Q96EV2 1170 aaKnown RBP31.26■■■□□ 2.59
AMBRA1-205ENST00000526606 PIK3C2BO00750 1634 aa31.26■■■□□ 2.59
AMBRA1-205ENST00000526606 LRRC9Q6ZRR7 1453 aa31.26■■■□□ 2.59
AMBRA1-205ENST00000526606 DUOX2Q9NRD8 1548 aa31.25■■■□□ 2.59
AMBRA1-205ENST00000526606 KCNA6P17658 529 aa31.24■■■□□ 2.59
AMBRA1-205ENST00000526606 ROBO1Q9Y6N7 1651 aa31.24■■■□□ 2.59
AMBRA1-205ENST00000526606 MAP3K1Q13233 1512 aa31.24■■■□□ 2.59
AMBRA1-205ENST00000526606 PRDM15P57071 1507 aaPredicted RBP31.21■■■□□ 2.59
AMBRA1-205ENST00000526606 TET3O43151 1660 aa31.21■■■□□ 2.59
AMBRA1-205ENST00000526606 KANK4Q5T7N3 995 aaPredicted RBP31.2■■■□□ 2.59
AMBRA1-205ENST00000526606 PROSER2Q86WR7 435 aaPredicted RBP31.19■■■□□ 2.58
AMBRA1-205ENST00000526606 SLC26A8Q96RN1 970 aa31.19■■■□□ 2.58
AMBRA1-205ENST00000526606 IDI1Q13907 227 aa31.18■■■□□ 2.58
AMBRA1-205ENST00000526606 MYOM3Q5VTT5 1437 aa31.16■■■□□ 2.58
AMBRA1-205ENST00000526606 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.15■■■□□ 2.58
AMBRA1-205ENST00000526606 KIF15Q9NS87 1388 aa31.15■■■□□ 2.58
AMBRA1-205ENST00000526606 SETD1AO15047 1707 aaKnown RBP31.15■■■□□ 2.58
AMBRA1-205ENST00000526606 RRP7BPQ9NSQ0 103 aa31.14■■■□□ 2.58
AMBRA1-205ENST00000526606 STAG3Q9UJ98 1225 aa31.14■■■□□ 2.58
AMBRA1-205ENST00000526606 EFCAB6Q5THR3 1501 aa31.13■■■□□ 2.57
AMBRA1-205ENST00000526606 KDM5AP29375 1690 aaKnown RBP31.11■■■□□ 2.57
AMBRA1-205ENST00000526606 ERBINQ96RT1 1412 aa31.11■■■□□ 2.57
AMBRA1-205ENST00000526606 ABCC5O15440 1437 aa31.09■■■□□ 2.57
AMBRA1-205ENST00000526606 SLAIN2Q9P270 581 aa31.09■■■□□ 2.57
AMBRA1-205ENST00000526606 NWD1Q149M9 1564 aa31.07■■■□□ 2.56
AMBRA1-205ENST00000526606 NKTRP30414 1462 aaKnown RBP31.05■■■□□ 2.56
AMBRA1-205ENST00000526606 VPS8Q8N3P4 1428 aa31.05■■■□□ 2.56
AMBRA1-205ENST00000526606 JCADQ9P266 1359 aa31.05■■■□□ 2.56
AMBRA1-205ENST00000526606 PHLPP1O60346 1717 aa31.04■■■□□ 2.56
AMBRA1-205ENST00000526606 LMTK2Q8IWU2 1503 aa31.03■■■□□ 2.56
AMBRA1-205ENST00000526606 MSH6P52701 1360 aa31.02■■■□□ 2.56
AMBRA1-205ENST00000526606 NOS1P29475 1434 aa31.01■■■□□ 2.55
AMBRA1-205ENST00000526606 CROCC2H7BZ55 1655 aa31■■■□□ 2.55
AMBRA1-205ENST00000526606 KANK1Q14678 1352 aa31■■■□□ 2.55
AMBRA1-205ENST00000526606 UPF1Q92900 1129 aaKnown RBP eCLIP30.98■■■□□ 2.55
AMBRA1-205ENST00000526606 COL16A1Q07092 1604 aaPredicted RBP30.97■■■□□ 2.55
AMBRA1-205ENST00000526606 LRP6O75581 1613 aa30.96■■■□□ 2.55
AMBRA1-205ENST00000526606 ADGRB3O60242 1522 aa30.96■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms