RNA–Protein interactions for RNA: ENST00000526067.1

ARHGEF12-205, Transcript of Rho guanine nucleotide exchange factor 12, humanhuman

TSL 3

Gene ARHGEF12, Length 1,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF12-205ENST00000526067 ABCA6Q8N139 1617 aa13.78□□□□□ -0.2
ARHGEF12-205ENST00000526067 TCOF1Q13428 1488 aaKnown RBP13.77□□□□□ -0.21
ARHGEF12-205ENST00000526067 HAX1O00165 279 aa13.75□□□□□ -0.21
ARHGEF12-205ENST00000526067 CDC42BPBQ9Y5S2 1711 aa13.75□□□□□ -0.21
ARHGEF12-205ENST00000526067 KIDINS220Q9ULH0 1771 aa13.75□□□□□ -0.21
ARHGEF12-205ENST00000526067 UBTFP17480 764 aaKnown RBP13.74□□□□□ -0.21
ARHGEF12-205ENST00000526067 HSPA1LP34931 641 aa13.74□□□□□ -0.21
ARHGEF12-205ENST00000526067 PTPRKQ15262 1439 aa13.74□□□□□ -0.21
ARHGEF12-205ENST00000526067 ABCC1P33527 1531 aa13.73□□□□□ -0.21
ARHGEF12-205ENST00000526067 TOM1O60784 492 aa13.72□□□□□ -0.21
ARHGEF12-205ENST00000526067 SPAG9O60271 1321 aaKnown RBP13.71□□□□□ -0.21
ARHGEF12-205ENST00000526067 MROH2AA6NES4 1674 aa13.71□□□□□ -0.21
ARHGEF12-205ENST00000526067 HNRNPMP52272 730 aaKnown RBP eCLIP13.7□□□□□ -0.22
ARHGEF12-205ENST00000526067 KIAA1107Q9UPP5 1409 aa13.7□□□□□ -0.22
ARHGEF12-205ENST00000526067 EVX2Q03828 476 aa13.69□□□□□ -0.22
ARHGEF12-205ENST00000526067 SAMD9LQ8IVG5 1584 aa13.69□□□□□ -0.22
ARHGEF12-205ENST00000526067 PREX2Q70Z35 1606 aa13.67□□□□□ -0.22
ARHGEF12-205ENST00000526067 CASKIN1Q8WXD9 1431 aa13.67□□□□□ -0.22
ARHGEF12-205ENST00000526067 ATXN8OSP0DMR3 200 aa13.66□□□□□ -0.22
ARHGEF12-205ENST00000526067 GGT6Q6P531 493 aa13.66□□□□□ -0.22
ARHGEF12-205ENST00000526067 GPATCH8Q9UKJ3 1502 aaKnown RBP13.66□□□□□ -0.22
ARHGEF12-205ENST00000526067 ITSN2Q9NZM3 1697 aa13.66□□□□□ -0.22
ARHGEF12-205ENST00000526067 A2MP01023 1474 aa13.65□□□□□ -0.22
ARHGEF12-205ENST00000526067 CEP170BQ9Y4F5 1589 aaPredicted RBP13.65□□□□□ -0.22
ARHGEF12-205ENST00000526067 ZNF777Q9ULD5 760 aaPredicted RBP13.64□□□□□ -0.23
ARHGEF12-205ENST00000526067 LRRIQ1Q96JM4 1722 aa13.64□□□□□ -0.23
ARHGEF12-205ENST00000526067 A2ML1A8K2U0 1454 aa13.64□□□□□ -0.23
ARHGEF12-205ENST00000526067 ZNF142P52746 1687 aaPredicted RBP13.64□□□□□ -0.23
ARHGEF12-205ENST00000526067 CPS1P31327 1500 aa13.64□□□□□ -0.23
ARHGEF12-205ENST00000526067 PIP4K2BP78356 416 aa13.64□□□□□ -0.23
ARHGEF12-205ENST00000526067 CCDC18Q5T9S5 1454 aa13.63□□□□□ -0.23
ARHGEF12-205ENST00000526067 SHANK2Q9UPX8 1470 aa13.63□□□□□ -0.23
ARHGEF12-205ENST00000526067 PLXNC1O60486 1568 aa13.63□□□□□ -0.23
ARHGEF12-205ENST00000526067 MED1Q15648 1581 aaPredicted RBP13.63□□□□□ -0.23
ARHGEF12-205ENST00000526067 ANKLE2Q86XL3 938 aa13.62□□□□□ -0.23
ARHGEF12-205ENST00000526067 CFDP1Q9UEE9 299 aaPredicted RBP13.62□□□□□ -0.23
ARHGEF12-205ENST00000526067 PLEKHH2Q8IVE3 1493 aa13.61□□□□□ -0.23
ARHGEF12-205ENST00000526067 FBXO31Q5XUX0 539 aaPredicted RBP13.61□□□□□ -0.23
ARHGEF12-205ENST00000526067 THEMISQ8N1K5 641 aaPredicted RBP13.61□□□□□ -0.23
ARHGEF12-205ENST00000526067 DNMT1P26358 1616 aaKnown RBP13.61□□□□□ -0.23
ARHGEF12-205ENST00000526067 MYO3AQ8NEV4 1616 aa13.61□□□□□ -0.23
ARHGEF12-205ENST00000526067 CDC42BPAQ5VT25 1732 aa13.6□□□□□ -0.23
ARHGEF12-205ENST00000526067 DHX29Q7Z478 1369 aaKnown RBP13.6□□□□□ -0.23
ARHGEF12-205ENST00000526067 SPDYE2BA6NHP3 402 aa13.6□□□□□ -0.23
ARHGEF12-205ENST00000526067 SPDYE6P0CI01 402 aa13.6□□□□□ -0.23
ARHGEF12-205ENST00000526067 SPDYE2Q495Y8 402 aa13.6□□□□□ -0.23
ARHGEF12-205ENST00000526067 ATP7AQ04656 1500 aa13.59□□□□□ -0.23
ARHGEF12-205ENST00000526067 CLTCQ00610 1675 aaKnown RBP13.59□□□□□ -0.23
ARHGEF12-205ENST00000526067 RTEL1-TNFRSF6BF6WH68 1400 aa13.59□□□□□ -0.23
ARHGEF12-205ENST00000526067 SUPT6HQ7KZ85 1726 aaKnown RBP13.58□□□□□ -0.23
ARHGEF12-205ENST00000526067 MED14O60244 1454 aa13.58□□□□□ -0.24
ARHGEF12-205ENST00000526067 SYCP2Q9BX26 1530 aa13.58□□□□□ -0.24
ARHGEF12-205ENST00000526067 RGS17Q9UGC6 210 aaPredicted RBP13.58□□□□□ -0.24
ARHGEF12-205ENST00000526067 ALKQ9UM73 1620 aa13.58□□□□□ -0.24
ARHGEF12-205ENST00000526067 TNRQ92752 1358 aa13.56□□□□□ -0.24
ARHGEF12-205ENST00000526067 NEURL4Q96JN8 1562 aa13.56□□□□□ -0.24
ARHGEF12-205ENST00000526067 MBD5Q9P267 1494 aa13.56□□□□□ -0.24
ARHGEF12-205ENST00000526067 INO80Q9ULG1 1556 aaPredicted RBP13.55□□□□□ -0.24
ARHGEF12-205ENST00000526067 MIA2Q96PC5 1412 aa13.55□□□□□ -0.24
ARHGEF12-205ENST00000526067 ZNF644Q9H582 1327 aaPredicted RBP13.55□□□□□ -0.24
ARHGEF12-205ENST00000526067 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.54□□□□□ -0.24
ARHGEF12-205ENST00000526067 RSPH4AQ5TD94 716 aa13.54□□□□□ -0.24
ARHGEF12-205ENST00000526067 VWDEQ8N2E2 1590 aa13.54□□□□□ -0.24
ARHGEF12-205ENST00000526067 CCNB3Q8WWL7 1395 aa13.54□□□□□ -0.24
ARHGEF12-205ENST00000526067 KIF3BO15066 747 aa13.53□□□□□ -0.24
ARHGEF12-205ENST00000526067 PZPP20742 1482 aa13.52□□□□□ -0.24
ARHGEF12-205ENST00000526067 MKRN4PQ13434 485 aaPredicted RBP13.52□□□□□ -0.25
ARHGEF12-205ENST00000526067 FYCO1Q9BQS8 1478 aa13.52□□□□□ -0.25
ARHGEF12-205ENST00000526067 WASHC2CQ9Y4E1 1318 aa13.51□□□□□ -0.25
ARHGEF12-205ENST00000526067 NPHP4O75161 1426 aaPredicted RBP13.51□□□□□ -0.25
ARHGEF12-205ENST00000526067 NLRP1Q9C000 1473 aa13.51□□□□□ -0.25
ARHGEF12-205ENST00000526067 FAM135AQ9P2D6 1515 aa13.5□□□□□ -0.25
ARHGEF12-205ENST00000526067 DEPDC5O75140 1603 aa13.49□□□□□ -0.25
ARHGEF12-205ENST00000526067 LRRC7Q96NW7 1537 aa13.49□□□□□ -0.25
ARHGEF12-205ENST00000526067 ADGBQ8N7X0 1667 aa13.48□□□□□ -0.25
ARHGEF12-205ENST00000526067 PRKAR2AP13861 404 aaKnown RBP13.47□□□□□ -0.25
ARHGEF12-205ENST00000526067 POLR1AO95602 1720 aaPredicted RBP13.46□□□□□ -0.25
ARHGEF12-205ENST00000526067 UGGT1Q9NYU2 1555 aa13.46□□□□□ -0.25
ARHGEF12-205ENST00000526067 FAM135BQ49AJ0 1406 aa13.44□□□□□ -0.26
ARHGEF12-205ENST00000526067 MTUS2Q5JR59 1369 aa13.44□□□□□ -0.26
ARHGEF12-205ENST00000526067 KDM5DQ9BY66 1539 aa13.44□□□□□ -0.26
ARHGEF12-205ENST00000526067 POTEAQ6S8J7 498 aa13.43□□□□□ -0.26
ARHGEF12-205ENST00000526067 SPDYE1Q8NFV5 336 aaPredicted RBP13.43□□□□□ -0.26
ARHGEF12-205ENST00000526067 SSUH2Q9Y2M2 353 aa13.43□□□□□ -0.26
ARHGEF12-205ENST00000526067 C19orf67A6NJJ6 358 aa13.42□□□□□ -0.26
ARHGEF12-205ENST00000526067 STRCP1A6NGW2 1772 aa13.42□□□□□ -0.26
ARHGEF12-205ENST00000526067 LTKP29376 864 aa13.41□□□□□ -0.26
ARHGEF12-205ENST00000526067 CEP162Q5TB80 1403 aa13.41□□□□□ -0.26
ARHGEF12-205ENST00000526067 CLEC11AQ9Y240 323 aa13.41□□□□□ -0.26
ARHGEF12-205ENST00000526067 TSPY4P0CV99 314 aa13.39□□□□□ -0.27
ARHGEF12-205ENST00000526067 TSPY10P0CW01 314 aa13.39□□□□□ -0.27
ARHGEF12-205ENST00000526067 TIAM1Q13009 1591 aa13.38□□□□□ -0.27
ARHGEF12-205ENST00000526067 IQGAP1P46940 1657 aa13.38□□□□□ -0.27
ARHGEF12-205ENST00000526067 TXNDC2Q86VQ3 553 aa13.38□□□□□ -0.27
ARHGEF12-205ENST00000526067 CCDC141Q6ZP82 1450 aa13.38□□□□□ -0.27
ARHGEF12-205ENST00000526067 ARHGAP23Q9P227 1491 aa13.37□□□□□ -0.27
ARHGEF12-205ENST00000526067 ZNF692Q9BU19 519 aaPredicted RBP13.37□□□□□ -0.27
ARHGEF12-205ENST00000526067 RNF17Q9BXT8 1623 aaKnown RBP13.36□□□□□ -0.27
ARHGEF12-205ENST00000526067 NCOA2Q15596 1464 aa13.36□□□□□ -0.27
ARHGEF12-205ENST00000526067 SYNMO15061 1565 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms