RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 A2ML1A8K2U0 1454 aa26.77■■□□□ 1.88
CCS-204ENST00000526066 MBD5Q9P267 1494 aa26.76■■□□□ 1.87
CCS-204ENST00000526066 DHX29Q7Z478 1369 aaKnown RBP26.75■■□□□ 1.87
CCS-204ENST00000526066 KANK4Q5T7N3 995 aaPredicted RBP26.75■■□□□ 1.87
CCS-204ENST00000526066 CCDC141Q6ZP82 1450 aa26.73■■□□□ 1.87
CCS-204ENST00000526066 DNMT1P26358 1616 aaKnown RBP26.72■■□□□ 1.87
CCS-204ENST00000526066 FAM135AQ9P2D6 1515 aa26.72■■□□□ 1.87
CCS-204ENST00000526066 KIF3BO15066 747 aa26.72■■□□□ 1.87
CCS-204ENST00000526066 KDM5DQ9BY66 1539 aa26.71■■□□□ 1.87
CCS-204ENST00000526066 POLR1AO95602 1720 aaPredicted RBP26.7■■□□□ 1.87
CCS-204ENST00000526066 RSPH4AQ5TD94 716 aa26.7■■□□□ 1.86
CCS-204ENST00000526066 TNRQ92752 1358 aa26.7■■□□□ 1.86
CCS-204ENST00000526066 CAMSAP2Q08AD1 1489 aa26.68■■□□□ 1.86
CCS-204ENST00000526066 WASHC2CQ9Y4E1 1318 aa26.67■■□□□ 1.86
CCS-204ENST00000526066 PZPP20742 1482 aa26.66■■□□□ 1.86
CCS-204ENST00000526066 NCOA2Q15596 1464 aa26.66■■□□□ 1.86
CCS-204ENST00000526066 SCAF1Q9H7N4 1312 aaKnown RBP26.65■■□□□ 1.86
CCS-204ENST00000526066 CPS1P31327 1500 aa26.63■■□□□ 1.85
CCS-204ENST00000526066 TSPY4P0CV99 314 aa26.62■■□□□ 1.85
CCS-204ENST00000526066 TSPY10P0CW01 314 aa26.62■■□□□ 1.85
CCS-204ENST00000526066 FBXO31Q5XUX0 539 aaPredicted RBP26.62■■□□□ 1.85
CCS-204ENST00000526066 ANKLE2Q86XL3 938 aa26.59■■□□□ 1.85
CCS-204ENST00000526066 THEMISQ8N1K5 641 aaPredicted RBP26.59■■□□□ 1.85
CCS-204ENST00000526066 ARHGEF5Q12774 1597 aa26.58■■□□□ 1.85
CCS-204ENST00000526066 NLRP1Q9C000 1473 aa26.58■■□□□ 1.85
CCS-204ENST00000526066 TOM1O60784 492 aa26.58■■□□□ 1.85
CCS-204ENST00000526066 NEURL4Q96JN8 1562 aa26.58■■□□□ 1.85
CCS-204ENST00000526066 SHANK2Q9UPX8 1470 aa26.56■■□□□ 1.84
CCS-204ENST00000526066 PIP4K2BP78356 416 aa26.56■■□□□ 1.84
CCS-204ENST00000526066 UGGT1Q9NYU2 1555 aa26.55■■□□□ 1.84
CCS-204ENST00000526066 PPARGC1BQ86YN6 1023 aaKnown RBP26.55■■□□□ 1.84
CCS-204ENST00000526066 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.55■■□□□ 1.84
CCS-204ENST00000526066 MIA2Q96PC5 1412 aa26.55■■□□□ 1.84
CCS-204ENST00000526066 ZC3H13Q5T200 1668 aaKnown RBP26.51■■□□□ 1.83
CCS-204ENST00000526066 DEPDC5O75140 1603 aa26.5■■□□□ 1.83
CCS-204ENST00000526066 NPHP4O75161 1426 aaPredicted RBP26.49■■□□□ 1.83
CCS-204ENST00000526066 RNF17Q9BXT8 1623 aaKnown RBP26.48■■□□□ 1.83
CCS-204ENST00000526066 HSPA1LP34931 641 aa26.47■■□□□ 1.83
CCS-204ENST00000526066 MYOM3Q5VTT5 1437 aa26.47■■□□□ 1.83
CCS-204ENST00000526066 MED14O60244 1454 aa26.46■■□□□ 1.83
CCS-204ENST00000526066 IQGAP1P46940 1657 aa26.46■■□□□ 1.83
CCS-204ENST00000526066 EIF2AK4Q9P2K8 1649 aaKnown RBP26.46■■□□□ 1.83
CCS-204ENST00000526066 VWDEQ8N2E2 1590 aa26.46■■□□□ 1.83
CCS-204ENST00000526066 MAST1Q9Y2H9 1570 aa26.46■■□□□ 1.83
CCS-204ENST00000526066 ABCC3O15438 1527 aa26.44■■□□□ 1.82
CCS-204ENST00000526066 MED1Q15648 1581 aaPredicted RBP26.42■■□□□ 1.82
CCS-204ENST00000526066 ERVK-7P63135 1459 aa26.38■■□□□ 1.81
CCS-204ENST00000526066 FGD6Q6ZV73 1430 aa26.37■■□□□ 1.81
CCS-204ENST00000526066 SYNMO15061 1565 aa26.37■■□□□ 1.81
CCS-204ENST00000526066 CEP152O94986 1710 aa26.36■■□□□ 1.81
CCS-204ENST00000526066 PHF23Q9BUL5 403 aaPredicted RBP26.36■■□□□ 1.81
CCS-204ENST00000526066 DUOX2Q9NRD8 1548 aa26.34■■□□□ 1.81
CCS-204ENST00000526066 CFAP65Q6ZU64 1925 aaKnown RBP26.33■■□□□ 1.81
CCS-204ENST00000526066 MROH1Q8NDA8 1641 aa26.32■■□□□ 1.8
CCS-204ENST00000526066 RRBP1Q9P2E9 1410 aaKnown RBP26.31■■□□□ 1.8
CCS-204ENST00000526066 UBR1Q8IWV7 1749 aa26.31■■□□□ 1.8
CCS-204ENST00000526066 LRRC7Q96NW7 1537 aa26.29■■□□□ 1.8
CCS-204ENST00000526066 SCAF11Q99590 1463 aaKnown RBP26.29■■□□□ 1.8
CCS-204ENST00000526066 STRCP1A6NGW2 1772 aa26.28■■□□□ 1.8
CCS-204ENST00000526066 SENP3Q9H4L4 574 aaPredicted RBP26.27■■□□□ 1.8
CCS-204ENST00000526066 PTPN23Q9H3S7 1636 aa26.27■■□□□ 1.8
CCS-204ENST00000526066 KIF15Q9NS87 1388 aa26.26■■□□□ 1.79
CCS-204ENST00000526066 EID1Q9Y6B2 187 aa26.26■■□□□ 1.79
CCS-204ENST00000526066 ALKQ9UM73 1620 aa26.25■■□□□ 1.79
CCS-204ENST00000526066 PRDM15P57071 1507 aaPredicted RBP26.24■■□□□ 1.79
CCS-204ENST00000526066 ERBINQ96RT1 1412 aa26.24■■□□□ 1.79
CCS-204ENST00000526066 KANK1Q14678 1352 aa26.23■■□□□ 1.79
CCS-204ENST00000526066 CROCC2H7BZ55 1655 aa26.23■■□□□ 1.79
CCS-204ENST00000526066 TXNDC2Q86VQ3 553 aa26.23■■□□□ 1.79
CCS-204ENST00000526066 STAG3Q9UJ98 1225 aa26.22■■□□□ 1.79
CCS-204ENST00000526066 ARHGAP31Q2M1Z3 1444 aa26.22■■□□□ 1.79
CCS-204ENST00000526066 SLIT1O75093 1534 aa26.2■■□□□ 1.79
CCS-204ENST00000526066 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.2■■□□□ 1.784e-8■□□□□ 8.4
CCS-204ENST00000526066 RRP7BPQ9NSQ0 103 aa26.19■■□□□ 1.78
CCS-204ENST00000526066 ARHGAP23Q9P227 1491 aa26.18■■□□□ 1.78
CCS-204ENST00000526066 FAM50AQ14320 339 aaKnown RBP26.18■■□□□ 1.78
CCS-204ENST00000526066 PIK3C2BO00750 1634 aa26.15■■□□□ 1.78
CCS-204ENST00000526066 LTKP29376 864 aa26.15■■□□□ 1.78
CCS-204ENST00000526066 ABCC5O15440 1437 aa26.14■■□□□ 1.78
CCS-204ENST00000526066 DAPK1P53355 1430 aa26.12■■□□□ 1.77
CCS-204ENST00000526066 TMEM2Q9UHN6 1383 aa26.11■■□□□ 1.77
CCS-204ENST00000526066 ANKRD30AQ9BXX3 1397 aa26.1■■□□□ 1.77
CCS-204ENST00000526066 EFCAB6Q5THR3 1501 aa26.1■■□□□ 1.77
CCS-204ENST00000526066 KDM5AP29375 1690 aaKnown RBP26.1■■□□□ 1.77
CCS-204ENST00000526066 XIRP1Q702N8 1843 aaKnown RBP26.08■■□□□ 1.77
CCS-204ENST00000526066 TRIM26Q12899 539 aaPredicted RBP26.07■■□□□ 1.76
CCS-204ENST00000526066 LMTK2Q8IWU2 1503 aa26.04■■□□□ 1.76
CCS-204ENST00000526066 CHIC2Q9UKJ5 165 aa26.04■■□□□ 1.76
CCS-204ENST00000526066 BCANQ96GW7 911 aa26.02■■□□□ 1.76
CCS-204ENST00000526066 TMEM94Q12767 1356 aa26.01■■□□□ 1.75
CCS-204ENST00000526066 IDI1Q13907 227 aa26.01■■□□□ 1.75
CCS-204ENST00000526066 FAM135BQ49AJ0 1406 aa26■■□□□ 1.75
CCS-204ENST00000526066 KCNA6P17658 529 aa26■■□□□ 1.75
CCS-204ENST00000526066 ADGRB3O60242 1522 aa25.99■■□□□ 1.75
CCS-204ENST00000526066 PROSER2Q86WR7 435 aaPredicted RBP25.99■■□□□ 1.75
CCS-204ENST00000526066 SLC26A8Q96RN1 970 aa25.98■■□□□ 1.75
CCS-204ENST00000526066 ITGAEP38570 1179 aa25.96■■□□□ 1.75
CCS-204ENST00000526066 SLC52A1Q9NWF4 448 aa25.96■■□□□ 1.75
CCS-204ENST00000526066 NKTRP30414 1462 aaKnown RBP25.95■■□□□ 1.74
CCS-204ENST00000526066 ROBO1Q9Y6N7 1651 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 198.5 ms