RNA–Protein interactions for RNA: ENST00000526058.1

CCS-203, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 4

Gene CCS, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-203ENST00000526058 FAM50AQ14320 339 aaKnown RBP26.32■■□□□ 1.8
CCS-203ENST00000526058 DUOX2Q9NRD8 1548 aa26.32■■□□□ 1.8
CCS-203ENST00000526058 KDM5DQ9BY66 1539 aa26.31■■□□□ 1.8
CCS-203ENST00000526058 RRP7BPQ9NSQ0 103 aa26.31■■□□□ 1.8
CCS-203ENST00000526058 CHIC2Q9UKJ5 165 aa26.31■■□□□ 1.8
CCS-203ENST00000526058 WASHC2CQ9Y4E1 1318 aa26.31■■□□□ 1.8
CCS-203ENST00000526058 RNF17Q9BXT8 1623 aaKnown RBP26.31■■□□□ 1.8
CCS-203ENST00000526058 EIF2AK4Q9P2K8 1649 aaKnown RBP26.31■■□□□ 1.8
CCS-203ENST00000526058 KIF15Q9NS87 1388 aa26.31■■□□□ 1.8
CCS-203ENST00000526058 FAM135AQ9P2D6 1515 aa26.28■■□□□ 1.8
CCS-203ENST00000526058 STRCQ7RTU9 1775 aa26.25■■□□□ 1.79
CCS-203ENST00000526058 MROH1Q8NDA8 1641 aa26.25■■□□□ 1.79
CCS-203ENST00000526058 FBXO31Q5XUX0 539 aaPredicted RBP26.24■■□□□ 1.79
CCS-203ENST00000526058 MYO3AQ8NEV4 1616 aa26.24■■□□□ 1.79
CCS-203ENST00000526058 ANKRD30AQ9BXX3 1397 aa26.23■■□□□ 1.79
CCS-203ENST00000526058 ERBINQ96RT1 1412 aa26.22■■□□□ 1.79
CCS-203ENST00000526058 NCOA1Q15788 1441 aa26.22■■□□□ 1.79
CCS-203ENST00000526058 ABCC3O15438 1527 aa26.21■■□□□ 1.79
CCS-203ENST00000526058 PZPP20742 1482 aa26.21■■□□□ 1.79
CCS-203ENST00000526058 ZC3H13Q5T200 1668 aaKnown RBP26.19■■□□□ 1.78
CCS-203ENST00000526058 CEP152O94986 1710 aa26.19■■□□□ 1.78
CCS-203ENST00000526058 ZNF142P52746 1687 aaPredicted RBP26.19■■□□□ 1.78
CCS-203ENST00000526058 ADGRL2O95490 1459 aa26.18■■□□□ 1.78
CCS-203ENST00000526058 CEP170BQ9Y4F5 1589 aaPredicted RBP26.17■■□□□ 1.78
CCS-203ENST00000526058 CAMSAP1Q5T5Y3 1602 aa26.16■■□□□ 1.78
CCS-203ENST00000526058 TNRQ92752 1358 aa26.15■■□□□ 1.78
CCS-203ENST00000526058 PRDM15P57071 1507 aaPredicted RBP26.14■■□□□ 1.78
CCS-203ENST00000526058 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.14■■□□□ 1.784e-8■□□□□ 8.4
CCS-203ENST00000526058 DEPDC5O75140 1603 aa26.14■■□□□ 1.77
CCS-203ENST00000526058 CFAP65Q6ZU64 1925 aaKnown RBP26.13■■□□□ 1.77
CCS-203ENST00000526058 A2ML1A8K2U0 1454 aa26.11■■□□□ 1.77
CCS-203ENST00000526058 DMRT2Q9Y5R5 561 aa26.11■■□□□ 1.77
CCS-203ENST00000526058 ILDR1Q86SU0 546 aaPredicted RBP26.1■■□□□ 1.77
CCS-203ENST00000526058 NCKAP5LQ9HCH0 1330 aa26.07■■□□□ 1.76
CCS-203ENST00000526058 ITGAEP38570 1179 aa26.06■■□□□ 1.76
CCS-203ENST00000526058 SPATA31D1Q6ZQQ2 1576 aa26.06■■□□□ 1.76
CCS-203ENST00000526058 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.06■■□□□ 1.76
CCS-203ENST00000526058 PTPRTO14522 1441 aa26.05■■□□□ 1.76
CCS-203ENST00000526058 ANKRD50Q9ULJ7 1429 aa26.05■■□□□ 1.76
CCS-203ENST00000526058 ERVK-7P63135 1459 aa26.05■■□□□ 1.76
CCS-203ENST00000526058 KANK1Q14678 1352 aa26.05■■□□□ 1.76
CCS-203ENST00000526058 PLA2R1Q13018 1463 aa26.04■■□□□ 1.76
CCS-203ENST00000526058 NLRP1Q9C000 1473 aa26.03■■□□□ 1.76
CCS-203ENST00000526058 VWDEQ8N2E2 1590 aa26.03■■□□□ 1.76
CCS-203ENST00000526058 ARHGAP31Q2M1Z3 1444 aa26.02■■□□□ 1.76
CCS-203ENST00000526058 ROCK1Q13464 1354 aa26.01■■□□□ 1.75
CCS-203ENST00000526058 LMTK2Q8IWU2 1503 aa25.99■■□□□ 1.75
CCS-203ENST00000526058 RRBP1Q9P2E9 1410 aaKnown RBP25.99■■□□□ 1.75
CCS-203ENST00000526058 PKD2Q13563 968 aa25.99■■□□□ 1.75
CCS-203ENST00000526058 UGGT1Q9NYU2 1555 aa25.98■■□□□ 1.75
CCS-203ENST00000526058 THEMISQ8N1K5 641 aaPredicted RBP25.95■■□□□ 1.74
CCS-203ENST00000526058 CERKQ8TCT0 537 aa25.95■■□□□ 1.74
CCS-203ENST00000526058 FBXO41Q8TF61 875 aa25.93■■□□□ 1.74
CCS-203ENST00000526058 POLR1AO95602 1720 aaPredicted RBP25.93■■□□□ 1.74
CCS-203ENST00000526058 EFCAB6Q5THR3 1501 aa25.92■■□□□ 1.74
CCS-203ENST00000526058 UNC13BO14795 1591 aa25.91■■□□□ 1.74
CCS-203ENST00000526058 UBR1Q8IWV7 1749 aa25.89■■□□□ 1.74
CCS-203ENST00000526058 NEURL4Q96JN8 1562 aa25.89■■□□□ 1.73
CCS-203ENST00000526058 ANKLE2Q86XL3 938 aa25.88■■□□□ 1.73
CCS-203ENST00000526058 LTBP4Q8N2S1 1624 aa25.88■■□□□ 1.73
CCS-203ENST00000526058 TET3O43151 1660 aa25.86■■□□□ 1.73
CCS-203ENST00000526058 SYNMO15061 1565 aa25.86■■□□□ 1.73
CCS-203ENST00000526058 PIK3C2BO00750 1634 aa25.85■■□□□ 1.73
CCS-203ENST00000526058 NOS1P29475 1434 aa25.84■■□□□ 1.73
CCS-203ENST00000526058 ZNF335Q9H4Z2 1342 aaPredicted RBP25.84■■□□□ 1.73
CCS-203ENST00000526058 GCC2Q8IWJ2 1684 aa25.83■■□□□ 1.73
CCS-203ENST00000526058 IDI1Q13907 227 aa25.82■■□□□ 1.72
CCS-203ENST00000526058 IQGAP3Q86VI3 1631 aa25.81■■□□□ 1.72
CCS-203ENST00000526058 RPRD2Q5VT52 1461 aaKnown RBP25.81■■□□□ 1.72
CCS-203ENST00000526058 NUP155O75694 1391 aa25.8■■□□□ 1.72
CCS-203ENST00000526058 MED14O60244 1454 aa25.79■■□□□ 1.72
CCS-203ENST00000526058 NPHP4O75161 1426 aaPredicted RBP25.79■■□□□ 1.72
CCS-203ENST00000526058 E9PCH4 1651 aa25.78■■□□□ 1.72
CCS-203ENST00000526058 STAG3Q9UJ98 1225 aa25.77■■□□□ 1.72
CCS-203ENST00000526058 NAIPQ13075 1403 aa25.77■■□□□ 1.72
CCS-203ENST00000526058 ARHGAP23Q9P227 1491 aa25.76■■□□□ 1.71
CCS-203ENST00000526058 SLIT1O75093 1534 aa25.76■■□□□ 1.71
CCS-203ENST00000526058 IQGAP1P46940 1657 aa25.76■■□□□ 1.71
CCS-203ENST00000526058 LTKP29376 864 aa25.75■■□□□ 1.71
CCS-203ENST00000526058 KDM5AP29375 1690 aaKnown RBP25.74■■□□□ 1.71
CCS-203ENST00000526058 SLC52A1Q9NWF4 448 aa25.74■■□□□ 1.71
CCS-203ENST00000526058 SCAF11Q99590 1463 aaKnown RBP25.72■■□□□ 1.71
CCS-203ENST00000526058 TXNDC2Q86VQ3 553 aa25.72■■□□□ 1.71
CCS-203ENST00000526058 TMEM2Q9UHN6 1383 aa25.71■■□□□ 1.71
CCS-203ENST00000526058 ADGRB3O60242 1522 aa25.7■■□□□ 1.7
CCS-203ENST00000526058 HFM1A2PYH4 1435 aa25.69■■□□□ 1.7
CCS-203ENST00000526058 MYO5BQ9ULV0 1848 aa25.68■■□□□ 1.7
CCS-203ENST00000526058 EID1Q9Y6B2 187 aa25.68■■□□□ 1.7
CCS-203ENST00000526058 IQSEC2Q5JU85 1478 aa25.67■■□□□ 1.7
CCS-203ENST00000526058 TMEM131LA2VDJ0 1609 aa25.63■■□□□ 1.69
CCS-203ENST00000526058 STRCP1A6NGW2 1772 aa25.62■■□□□ 1.69
CCS-203ENST00000526058 CPS1P31327 1500 aa25.62■■□□□ 1.69
CCS-203ENST00000526058 CHGAP10645 457 aaKnown RBP25.6■■□□□ 1.69
CCS-203ENST00000526058 SPHKAPQ2M3C7 1700 aa25.6■■□□□ 1.69
CCS-203ENST00000526058 TRIM52Q96A61 297 aa25.59■■□□□ 1.69
CCS-203ENST00000526058 ZFYVE9O95405 1425 aa25.56■■□□□ 1.68
CCS-203ENST00000526058 RIMS2Q9UQ26 1411 aa25.54■■□□□ 1.68
CCS-203ENST00000526058 SENP3Q9H4L4 574 aaPredicted RBP25.54■■□□□ 1.68
CCS-203ENST00000526058 UBAP1LF5GYI3 381 aa25.53■■□□□ 1.68
CCS-203ENST00000526058 SLC26A8Q96RN1 970 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms