RNA–Protein interactions for RNA: ENST00000525945.1

GRAMD1B-205, Transcript of GRAM domain containing 1B, humanhuman

TSL 2

Gene GRAMD1B, Length 1,046 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1B-205ENST00000525945 FAM135AQ9P2D6 1515 aa13.24□□□□□ -0.29
GRAMD1B-205ENST00000525945 RTEL1-TNFRSF6BF6WH68 1400 aa13.24□□□□□ -0.29
GRAMD1B-205ENST00000525945 MTUS2Q5JR59 1369 aa13.24□□□□□ -0.29
GRAMD1B-205ENST00000525945 CACNB1Q02641 598 aaPredicted RBP13.24□□□□□ -0.29
GRAMD1B-205ENST00000525945 TOM1O60784 492 aa13.23□□□□□ -0.29
GRAMD1B-205ENST00000525945 TIAM1Q13009 1591 aa13.22□□□□□ -0.29
GRAMD1B-205ENST00000525945 MED1Q15648 1581 aaPredicted RBP13.22□□□□□ -0.29
GRAMD1B-205ENST00000525945 SCAF1Q9H7N4 1312 aaKnown RBP13.21□□□□□ -0.29
GRAMD1B-205ENST00000525945 NEURL4Q96JN8 1562 aa13.21□□□□□ -0.29
GRAMD1B-205ENST00000525945 EHBP1L1Q8N3D4 1523 aa13.21□□□□□ -0.29
GRAMD1B-205ENST00000525945 KDM5DQ9BY66 1539 aa13.21□□□□□ -0.29
GRAMD1B-205ENST00000525945 MBD5Q9P267 1494 aa13.21□□□□□ -0.3
GRAMD1B-205ENST00000525945 DHX29Q7Z478 1369 aaKnown RBP13.2□□□□□ -0.3
GRAMD1B-205ENST00000525945 TNRQ92752 1358 aa13.2□□□□□ -0.3
GRAMD1B-205ENST00000525945 PZPP20742 1482 aa13.2□□□□□ -0.3
GRAMD1B-205ENST00000525945 SHANK2Q9UPX8 1470 aa13.2□□□□□ -0.3
GRAMD1B-205ENST00000525945 PIP4K2BP78356 416 aa13.19□□□□□ -0.3
GRAMD1B-205ENST00000525945 HSPA1LP34931 641 aa13.18□□□□□ -0.3
GRAMD1B-205ENST00000525945 NLRP1Q9C000 1473 aa13.17□□□□□ -0.3
GRAMD1B-205ENST00000525945 ZNF644Q9H582 1327 aaPredicted RBP13.17□□□□□ -0.3
GRAMD1B-205ENST00000525945 CEP162Q5TB80 1403 aa13.17□□□□□ -0.3
GRAMD1B-205ENST00000525945 ANKLE2Q86XL3 938 aa13.17□□□□□ -0.3
GRAMD1B-205ENST00000525945 DEPDC5O75140 1603 aa13.17□□□□□ -0.3
GRAMD1B-205ENST00000525945 CCDC141Q6ZP82 1450 aa13.16□□□□□ -0.3
GRAMD1B-205ENST00000525945 KIF3BO15066 747 aa13.16□□□□□ -0.3
GRAMD1B-205ENST00000525945 THEMISQ8N1K5 641 aaPredicted RBP13.16□□□□□ -0.3
GRAMD1B-205ENST00000525945 MED14O60244 1454 aa13.16□□□□□ -0.3
GRAMD1B-205ENST00000525945 VWDEQ8N2E2 1590 aa13.15□□□□□ -0.3
GRAMD1B-205ENST00000525945 UGGT1Q9NYU2 1555 aa13.15□□□□□ -0.3
GRAMD1B-205ENST00000525945 WASHC2CQ9Y4E1 1318 aa13.15□□□□□ -0.3
GRAMD1B-205ENST00000525945 RSPH4AQ5TD94 716 aa13.15□□□□□ -0.3
GRAMD1B-205ENST00000525945 FBXO31Q5XUX0 539 aaPredicted RBP13.15□□□□□ -0.3
GRAMD1B-205ENST00000525945 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.15□□□□□ -0.3
GRAMD1B-205ENST00000525945 MIA2Q96PC5 1412 aa13.14□□□□□ -0.31
GRAMD1B-205ENST00000525945 NPHP4O75161 1426 aaPredicted RBP13.13□□□□□ -0.31
GRAMD1B-205ENST00000525945 IQGAP1P46940 1657 aa13.13□□□□□ -0.31
GRAMD1B-205ENST00000525945 CAMSAP2Q08AD1 1489 aa13.13□□□□□ -0.31
GRAMD1B-205ENST00000525945 ZC3H13Q5T200 1668 aaKnown RBP13.12□□□□□ -0.31
GRAMD1B-205ENST00000525945 SYNMO15061 1565 aa13.11□□□□□ -0.31
GRAMD1B-205ENST00000525945 ARHGEF5Q12774 1597 aa13.11□□□□□ -0.31
GRAMD1B-205ENST00000525945 RNF17Q9BXT8 1623 aaKnown RBP13.1□□□□□ -0.31
GRAMD1B-205ENST00000525945 ALKQ9UM73 1620 aa13.1□□□□□ -0.31
GRAMD1B-205ENST00000525945 NCOA2Q15596 1464 aa13.09□□□□□ -0.31
GRAMD1B-205ENST00000525945 TSPY4P0CV99 314 aa13.08□□□□□ -0.32
GRAMD1B-205ENST00000525945 TSPY10P0CW01 314 aa13.08□□□□□ -0.32
GRAMD1B-205ENST00000525945 LRRC7Q96NW7 1537 aa13.07□□□□□ -0.32
GRAMD1B-205ENST00000525945 EIF2AK4Q9P2K8 1649 aaKnown RBP13.06□□□□□ -0.32
GRAMD1B-205ENST00000525945 ABCC3O15438 1527 aa13.06□□□□□ -0.32
GRAMD1B-205ENST00000525945 STRCP1A6NGW2 1772 aa13.05□□□□□ -0.32
GRAMD1B-205ENST00000525945 MAST1Q9Y2H9 1570 aa13.05□□□□□ -0.32
GRAMD1B-205ENST00000525945 ERVK-7P63135 1459 aa13.04□□□□□ -0.32
GRAMD1B-205ENST00000525945 UBR1Q8IWV7 1749 aa13.02□□□□□ -0.32
GRAMD1B-205ENST00000525945 SCAF11Q99590 1463 aaKnown RBP13.02□□□□□ -0.33
GRAMD1B-205ENST00000525945 MROH1Q8NDA8 1641 aa13□□□□□ -0.33
GRAMD1B-205ENST00000525945 CEP152O94986 1710 aa12.99□□□□□ -0.33
GRAMD1B-205ENST00000525945 SLIT1O75093 1534 aa12.99□□□□□ -0.33
GRAMD1B-205ENST00000525945 ARHGAP23Q9P227 1491 aa12.98□□□□□ -0.33
GRAMD1B-205ENST00000525945 DUOX2Q9NRD8 1548 aa12.98□□□□□ -0.33
GRAMD1B-205ENST00000525945 LRRC9Q6ZRR7 1453 aa12.97□□□□□ -0.33
GRAMD1B-205ENST00000525945 EID1Q9Y6B2 187 aa12.97□□□□□ -0.33
GRAMD1B-205ENST00000525945 ARHGAP31Q2M1Z3 1444 aa12.96□□□□□ -0.33
GRAMD1B-205ENST00000525945 TXNDC2Q86VQ3 553 aa12.96□□□□□ -0.33
GRAMD1B-205ENST00000525945 PRDM15P57071 1507 aaPredicted RBP12.96□□□□□ -0.33
GRAMD1B-205ENST00000525945 XIRP1Q702N8 1843 aaKnown RBP12.95□□□□□ -0.34
GRAMD1B-205ENST00000525945 MYOM3Q5VTT5 1437 aa12.95□□□□□ -0.34
GRAMD1B-205ENST00000525945 LTKP29376 864 aa12.94□□□□□ -0.34
GRAMD1B-205ENST00000525945 FAM135BQ49AJ0 1406 aa12.94□□□□□ -0.34
GRAMD1B-205ENST00000525945 ERBINQ96RT1 1412 aa12.94□□□□□ -0.34
GRAMD1B-205ENST00000525945 KDM5AP29375 1690 aaKnown RBP12.93□□□□□ -0.34
GRAMD1B-205ENST00000525945 RGS17Q9UGC6 210 aaPredicted RBP12.93□□□□□ -0.34
GRAMD1B-205ENST00000525945 PIK3C2BO00750 1634 aa12.92□□□□□ -0.34
GRAMD1B-205ENST00000525945 VPS8Q8N3P4 1428 aa12.92□□□□□ -0.34
GRAMD1B-205ENST00000525945 MAP3K1Q13233 1512 aa12.92□□□□□ -0.34
GRAMD1B-205ENST00000525945 TMEM2Q9UHN6 1383 aa12.92□□□□□ -0.34
GRAMD1B-205ENST00000525945 STAG3Q9UJ98 1225 aa12.91□□□□□ -0.34
GRAMD1B-205ENST00000525945 CFAP65Q6ZU64 1925 aaKnown RBP12.91□□□□□ -0.34
GRAMD1B-205ENST00000525945 KIF15Q9NS87 1388 aa12.91□□□□□ -0.34
GRAMD1B-205ENST00000525945 CROCC2H7BZ55 1655 aa12.9□□□□□ -0.34
GRAMD1B-205ENST00000525945 EFCAB6Q5THR3 1501 aa12.9□□□□□ -0.34
GRAMD1B-205ENST00000525945 KANK1Q14678 1352 aa12.9□□□□□ -0.34
GRAMD1B-205ENST00000525945 ROBO1Q9Y6N7 1651 aa12.89□□□□□ -0.35
GRAMD1B-205ENST00000525945 TMEM94Q12767 1356 aa12.89□□□□□ -0.35
GRAMD1B-205ENST00000525945 NKTRP30414 1462 aaKnown RBP12.87□□□□□ -0.35
GRAMD1B-205ENST00000525945 KCNA6P17658 529 aa12.87□□□□□ -0.35
GRAMD1B-205ENST00000525945 LMTK2Q8IWU2 1503 aa12.87□□□□□ -0.35
GRAMD1B-205ENST00000525945 RRP7BPQ9NSQ0 103 aa12.86□□□□□ -0.35
GRAMD1B-205ENST00000525945 TET3O43151 1660 aa12.86□□□□□ -0.35
GRAMD1B-205ENST00000525945 NWD1Q149M9 1564 aa12.86□□□□□ -0.35
GRAMD1B-205ENST00000525945 KANK4Q5T7N3 995 aaPredicted RBP12.85□□□□□ -0.35
GRAMD1B-205ENST00000525945 POTEAQ6S8J7 498 aa12.85□□□□□ -0.35
GRAMD1B-205ENST00000525945 PROSER2Q86WR7 435 aaPredicted RBP12.85□□□□□ -0.35
GRAMD1B-205ENST00000525945 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.85□□□□□ -0.35
GRAMD1B-205ENST00000525945 ABCC5O15440 1437 aa12.85□□□□□ -0.35
GRAMD1B-205ENST00000525945 PTPN23Q9H3S7 1636 aa12.84□□□□□ -0.35
GRAMD1B-205ENST00000525945 MSH6P52701 1360 aa12.84□□□□□ -0.35
GRAMD1B-205ENST00000525945 ADGRB3O60242 1522 aa12.84□□□□□ -0.35
GRAMD1B-205ENST00000525945 DAPK1P53355 1430 aa12.83□□□□□ -0.36
GRAMD1B-205ENST00000525945 IDI1Q13907 227 aa12.83□□□□□ -0.36
GRAMD1B-205ENST00000525945 SLC26A8Q96RN1 970 aa12.83□□□□□ -0.36
GRAMD1B-205ENST00000525945 PHLPP1O60346 1717 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms