RNA–Protein interactions for RNA: ENST00000525599.1

CCDC17-208, Transcript of coiled-coil domain containing 17, human

TSL 2

Gene CCDC17, Length 1,403 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC17-208	ENST00000525599	MADD	Q8WXG6	1647 aa		33.27	■■■□□ 2.92
CCDC17-208	ENST00000525599	KDM4F	A0A1W2PPD8	638 aa		33.27	■■■□□ 2.92
CCDC17-208	ENST00000525599	FER1L4	A9Z1Z3	1794 aa		33.27	■■■□□ 2.92
CCDC17-208	ENST00000525599	GGT6	Q6P531	493 aa		33.26	■■■□□ 2.91
CCDC17-208	ENST00000525599	CNTLN	Q9NXG0	1405 aa		33.24	■■■□□ 2.91
CCDC17-208	ENST00000525599	PRDM15	P57071	1507 aa	Predicted RBP	33.23	■■■□□ 2.91
CCDC17-208	ENST00000525599	MROH1	Q8NDA8	1641 aa		33.23	■■■□□ 2.91
CCDC17-208	ENST00000525599	ESF1	Q9H501	851 aa	Known RBP	33.19	■■■□□ 2.9
CCDC17-208	ENST00000525599	KDM5D	Q9BY66	1539 aa		33.18	■■■□□ 2.9
CCDC17-208	ENST00000525599	ZC3H13	Q5T200	1668 aa	Known RBP	33.17	■■■□□ 2.9
CCDC17-208	ENST00000525599	RIMS1	Q86UR5	1692 aa	Known RBP	33.17	■■■□□ 2.9
CCDC17-208	ENST00000525599	UNC13B	O14795	1591 aa		33.17	■■■□□ 2.9
CCDC17-208	ENST00000525599	MROH2A	A6NES4	1674 aa		33.16	■■■□□ 2.9
CCDC17-208	ENST00000525599	TRIM26	Q12899	539 aa	Predicted RBP	33.15	■■■□□ 2.9
CCDC17-208	ENST00000525599	KANK1	Q14678	1352 aa		33.15	■■■□□ 2.9
CCDC17-208	ENST00000525599	VWDE	Q8N2E2	1590 aa		33.13	■■■□□ 2.89
CCDC17-208	ENST00000525599	PTPRM	P28827	1452 aa		33.13	■■■□□ 2.89
CCDC17-208	ENST00000525599	WASHC2C	Q9Y4E1	1318 aa		33.12	■■■□□ 2.89
CCDC17-208	ENST00000525599	CLTC	Q00610	1675 aa	Known RBP	33.12	■■■□□ 2.89
CCDC17-208	ENST00000525599	ABCC3	O15438	1527 aa		33.11	■■■□□ 2.89
CCDC17-208	ENST00000525599	ACIN1	Q9UKV3	1341 aa	Known RBP	33.1	■■■□□ 2.89
CCDC17-208	ENST00000525599	SETD5	Q9C0A6	1442 aa		33.09	■■■□□ 2.89
CCDC17-208	ENST00000525599	LMTK2	Q8IWU2	1503 aa		33.07	■■■□□ 2.88
CCDC17-208	ENST00000525599	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	33.06	■■■□□ 2.88
CCDC17-208	ENST00000525599	ZMYM3	Q14202	1370 aa		33.04	■■■□□ 2.88
CCDC17-208	ENST00000525599	CEP152	O94986	1710 aa		33.03	■■■□□ 2.88
CCDC17-208	ENST00000525599	IQGAP3	Q86VI3	1631 aa		33.03	■■■□□ 2.88
CCDC17-208	ENST00000525599	C3	P01024	1663 aa		33.02	■■■□□ 2.88
CCDC17-208	ENST00000525599	CAMSAP1	Q5T5Y3	1602 aa		33	■■■□□ 2.87
CCDC17-208	ENST00000525599	NUP155	O75694	1391 aa		33	■■■□□ 2.87
CCDC17-208	ENST00000525599	ARHGAP31	Q2M1Z3	1444 aa		32.98	■■■□□ 2.87
CCDC17-208	ENST00000525599	PZP	P20742	1482 aa		32.97	■■■□□ 2.87
CCDC17-208	ENST00000525599	TET3	O43151	1660 aa		32.96	■■■□□ 2.87
CCDC17-208	ENST00000525599	HRC	P23327	699 aa		32.96	■■■□□ 2.87
CCDC17-208	ENST00000525599	RAB3GAP2	Q9H2M9	1393 aa		32.95	■■■□□ 2.87
CCDC17-208	ENST00000525599	EFCAB6	Q5THR3	1501 aa		32.94	■■■□□ 2.86
CCDC17-208	ENST00000525599	NPAT	Q14207	1427 aa		32.93	■■■□□ 2.86
CCDC17-208	ENST00000525599	RPRD2	Q5VT52	1461 aa	Known RBP	32.9	■■■□□ 2.86
CCDC17-208	ENST00000525599	CEBPA	P49715	358 aa	Predicted RBP	32.9	■■■□□ 2.86
CCDC17-208	ENST00000525599	TRIM52	Q96A61	297 aa		32.88	■■■□□ 2.85
CCDC17-208	ENST00000525599	SETD1B	Q9UPS6	1966 aa	Known RBP	32.87	■■■□□ 2.85
CCDC17-208	ENST00000525599	AEBP2	Q6ZN18	517 aa	Predicted RBP	32.84	■■■□□ 2.85
CCDC17-208	ENST00000525599	SPATA31D1	Q6ZQQ2	1576 aa		32.83	■■■□□ 2.85
CCDC17-208	ENST00000525599	PLPPR3	Q6T4P5	718 aa		32.82	■■■□□ 2.84
CCDC17-208	ENST00000525599	ERVK-7	P63135	1459 aa		32.82	■■■□□ 2.84
CCDC17-208	ENST00000525599	PREX1	Q8TCU6	1659 aa		32.81	■■■□□ 2.84
CCDC17-208	ENST00000525599		E9PCH4	1651 aa		32.8	■■■□□ 2.84
CCDC17-208	ENST00000525599	FBXO31	Q5XUX0	539 aa	Predicted RBP	32.77	■■■□□ 2.84
CCDC17-208	ENST00000525599	SLC4A1AP	Q9BWU0	796 aa	Known RBP	32.77	■■■□□ 2.84
CCDC17-208	ENST00000525599	TNR	Q92752	1358 aa		32.76	■■■□□ 2.84
CCDC17-208	ENST00000525599	NOS1	P29475	1434 aa		32.75	■■■□□ 2.83
CCDC17-208	ENST00000525599	CFAP65	Q6ZU64	1925 aa	Known RBP	32.73	■■■□□ 2.83
CCDC17-208	ENST00000525599	MPHOSPH9	Q99550	1183 aa		32.72	■■■□□ 2.83
CCDC17-208	ENST00000525599	UHRF1BP1	Q6BDS2	1440 aa		32.71	■■■□□ 2.83
CCDC17-208	ENST00000525599	NLRP1	Q9C000	1473 aa		32.71	■■■□□ 2.83
CCDC17-208	ENST00000525599	MYO3A	Q8NEV4	1616 aa		32.71	■■■□□ 2.83
CCDC17-208	ENST00000525599	PKD2	Q13563	968 aa		32.68	■■■□□ 2.82
CCDC17-208	ENST00000525599	ZNF142	P52746	1687 aa	Predicted RBP	32.66	■■■□□ 2.82
CCDC17-208	ENST00000525599	PTPRT	O14522	1441 aa		32.66	■■■□□ 2.82
CCDC17-208	ENST00000525599	SYNM	O15061	1565 aa		32.66	■■■□□ 2.82
CCDC17-208	ENST00000525599	SPHKAP	Q2M3C7	1700 aa		32.65	■■■□□ 2.82
CCDC17-208	ENST00000525599	PCGF6	Q9BYE7	350 aa		32.65	■■■□□ 2.82
CCDC17-208	ENST00000525599	LMTK3	Q96Q04	1460 aa		32.63	■■■□□ 2.81
CCDC17-208	ENST00000525599	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	32.62	■■■□□ 2.81
CCDC17-208	ENST00000525599	A2ML1	A8K2U0	1454 aa		32.62	■■■□□ 2.81
CCDC17-208	ENST00000525599	SLC52A1	Q9NWF4	448 aa		32.62	■■■□□ 2.81
CCDC17-208	ENST00000525599	TRPM2	O94759	1503 aa		32.6	■■■□□ 2.81
CCDC17-208	ENST00000525599	PIK3C2B	O00750	1634 aa		32.59	■■■□□ 2.81
CCDC17-208	ENST00000525599	KDM5A	P29375	1690 aa	Known RBP	32.56	■■■□□ 2.8
CCDC17-208	ENST00000525599	PLA2R1	Q13018	1463 aa		32.55	■■■□□ 2.8
CCDC17-208	ENST00000525599	IDI1	Q13907	227 aa		32.52	■■■□□ 2.8
CCDC17-208	ENST00000525599	UGGT1	Q9NYU2	1555 aa		32.52	■■■□□ 2.8
CCDC17-208	ENST00000525599	UBR1	Q8IWV7	1749 aa		32.49	■■■□□ 2.79
CCDC17-208	ENST00000525599	FOXD1	Q16676	465 aa		32.49	■■■□□ 2.79
CCDC17-208	ENST00000525599	ADGRB3	O60242	1522 aa		32.48	■■■□□ 2.79
CCDC17-208	ENST00000525599	THEMIS	Q8N1K5	641 aa	Predicted RBP	32.46	■■■□□ 2.79
CCDC17-208	ENST00000525599	CLTCL1	P53675	1640 aa		32.45	■■■□□ 2.79
CCDC17-208	ENST00000525599	CCDC144A	A2RUR9	1427 aa		32.44	■■■□□ 2.78
CCDC17-208	ENST00000525599	ANKRD30B	Q9BXX2	1392 aa		32.43	■■■□□ 2.78
CCDC17-208	ENST00000525599	TMEM131L	A2VDJ0	1609 aa		32.42	■■■□□ 2.78
CCDC17-208	ENST00000525599	STAG3	Q9UJ98	1225 aa		32.42	■■■□□ 2.78
CCDC17-208	ENST00000525599	DHX57	Q6P158	1386 aa	Known RBP	32.41	■■■□□ 2.78
CCDC17-208	ENST00000525599	HSPA2	P54652	639 aa		32.39	■■■□□ 2.78
CCDC17-208	ENST00000525599	KIF1B	O60333	1816 aa		32.39	■■■□□ 2.77
CCDC17-208	ENST00000525599	SLIT1	O75093	1534 aa		32.37	■■■□□ 2.77
CCDC17-208	ENST00000525599	ARHGAP23	Q9P227	1491 aa		32.35	■■■□□ 2.77
CCDC17-208	ENST00000525599	NEURL4	Q96JN8	1562 aa		32.34	■■■□□ 2.77
CCDC17-208	ENST00000525599	TMEM2	Q9UHN6	1383 aa		32.33	■■■□□ 2.77
CCDC17-208	ENST00000525599	MYO5B	Q9ULV0	1848 aa		32.33	■■■□□ 2.77
CCDC17-208	ENST00000525599	CHGA	P10645	457 aa	Known RBP	32.3	■■■□□ 2.76
CCDC17-208	ENST00000525599	POLR1A	O95602	1720 aa	Predicted RBP	32.27	■■■□□ 2.76
CCDC17-208	ENST00000525599	ANKLE2	Q86XL3	938 aa		32.26	■■■□□ 2.76
CCDC17-208	ENST00000525599	STRC	Q7RTU9	1775 aa		32.26	■■■□□ 2.76
CCDC17-208	ENST00000525599	SPATA31E1	Q6ZUB1	1445 aa		32.26	■■■□□ 2.76
CCDC17-208	ENST00000525599	HDGF	P51858	240 aa	Known RBP	32.26	■■■□□ 2.75
CCDC17-208	ENST00000525599	ZFYVE9	O95405	1425 aa		32.25	■■■□□ 2.75
CCDC17-208	ENST00000525599	EID1	Q9Y6B2	187 aa		32.24	■■■□□ 2.75
CCDC17-208	ENST00000525599	SCAF11	Q99590	1463 aa	Known RBP	32.24	■■■□□ 2.75
CCDC17-208	ENST00000525599	RIMS2	Q9UQ26	1411 aa		32.22	■■■□□ 2.75
CCDC17-208	ENST00000525599	MED14	O60244	1454 aa		32.21	■■■□□ 2.75

Retrieved 100 of 20,778 RNA–protein pairs in 391.5 ms