RNA–Protein interactions for RNA: ENST00000525435.1

CCS-202, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-202ENST00000525435 FAM135AQ9P2D6 1515 aa18.64■□□□□ 0.57
CCS-202ENST00000525435 EIF2AK4Q9P2K8 1649 aaKnown RBP18.63■□□□□ 0.57
CCS-202ENST00000525435 ZMYM3Q14202 1370 aa18.62■□□□□ 0.57
CCS-202ENST00000525435 MADDQ8WXG6 1647 aa18.61■□□□□ 0.57
CCS-202ENST00000525435 ACIN1Q9UKV3 1341 aaKnown RBP18.61■□□□□ 0.57
CCS-202ENST00000525435 HFM1A2PYH4 1435 aa18.6■□□□□ 0.57
CCS-202ENST00000525435 KANK1Q14678 1352 aa18.6■□□□□ 0.57
CCS-202ENST00000525435 NAIPQ13075 1403 aa18.59■□□□□ 0.57
CCS-202ENST00000525435 RNF17Q9BXT8 1623 aaKnown RBP18.59■□□□□ 0.57
CCS-202ENST00000525435 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.58■□□□□ 0.566e-7■■■■□ 22.3
CCS-202ENST00000525435 KDM5DQ9BY66 1539 aa18.57■□□□□ 0.56
CCS-202ENST00000525435 CEBPAP49715 358 aaPredicted RBP18.56■□□□□ 0.56
CCS-202ENST00000525435 FER1L4A9Z1Z3 1794 aa18.55■□□□□ 0.56
CCS-202ENST00000525435 PRDM15P57071 1507 aaPredicted RBP18.54■□□□□ 0.56
CCS-202ENST00000525435 RIMS1Q86UR5 1692 aaKnown RBP18.54■□□□□ 0.56
CCS-202ENST00000525435 NPATQ14207 1427 aa18.53■□□□□ 0.56
CCS-202ENST00000525435 ABCC3O15438 1527 aa18.52■□□□□ 0.56
CCS-202ENST00000525435 DEPDC5O75140 1603 aa18.52■□□□□ 0.55
CCS-202ENST00000525435 MROH1Q8NDA8 1641 aa18.52■□□□□ 0.55
CCS-202ENST00000525435 ARHGAP31Q2M1Z3 1444 aa18.51■□□□□ 0.55
CCS-202ENST00000525435 HRCP23327 699 aa18.51■□□□□ 0.55
CCS-202ENST00000525435 NUP155O75694 1391 aa18.51■□□□□ 0.55
CCS-202ENST00000525435 MROH2AA6NES4 1674 aa18.5■□□□□ 0.55
CCS-202ENST00000525435 VWDEQ8N2E2 1590 aa18.5■□□□□ 0.55
CCS-202ENST00000525435 SETD5Q9C0A6 1442 aa18.49■□□□□ 0.55
CCS-202ENST00000525435 LMTK2Q8IWU2 1503 aa18.49■□□□□ 0.55
CCS-202ENST00000525435 TRIM26Q12899 539 aaPredicted RBP18.49■□□□□ 0.55
CCS-202ENST00000525435 PLPPR3Q6T4P5 718 aa18.49■□□□□ 0.55
CCS-202ENST00000525435 PZPP20742 1482 aa18.49■□□□□ 0.55
CCS-202ENST00000525435 SETD1BQ9UPS6 1966 aaKnown RBP18.48■□□□□ 0.55
CCS-202ENST00000525435 CLTCQ00610 1675 aaKnown RBP18.47■□□□□ 0.55
CCS-202ENST00000525435 ZC3H13Q5T200 1668 aaKnown RBP18.47■□□□□ 0.55
CCS-202ENST00000525435 FBXO31Q5XUX0 539 aaPredicted RBP18.46■□□□□ 0.55
CCS-202ENST00000525435 UNC13BO14795 1591 aa18.45■□□□□ 0.54
CCS-202ENST00000525435 TRIM52Q96A61 297 aa18.44■□□□□ 0.54
CCS-202ENST00000525435 C3P01024 1663 aa18.44■□□□□ 0.54
CCS-202ENST00000525435 GCC2Q8IWJ2 1684 aa18.44■□□□□ 0.54
CCS-202ENST00000525435 RPRD2Q5VT52 1461 aaKnown RBP18.43■□□□□ 0.54
CCS-202ENST00000525435 TNRQ92752 1358 aa18.42■□□□□ 0.54
CCS-202ENST00000525435 UHRF1BP1Q6BDS2 1440 aa18.4■□□□□ 0.54
CCS-202ENST00000525435 RAB3GAP2Q9H2M9 1393 aa18.4■□□□□ 0.54
CCS-202ENST00000525435 SLC4A1APQ9BWU0 796 aaKnown RBP18.39■□□□□ 0.53
CCS-202ENST00000525435 SLC52A1Q9NWF4 448 aa18.39■□□□□ 0.53
CCS-202ENST00000525435 IQGAP3Q86VI3 1631 aa18.38■□□□□ 0.53
CCS-202ENST00000525435 ERVK-7P63135 1459 aa18.38■□□□□ 0.53
CCS-202ENST00000525435 EFCAB6Q5THR3 1501 aa18.38■□□□□ 0.53
CCS-202ENST00000525435 CAMSAP1Q5T5Y3 1602 aa18.38■□□□□ 0.53
CCS-202ENST00000525435 NLRP1Q9C000 1473 aa18.37■□□□□ 0.53
CCS-202ENST00000525435 SPATA31D1Q6ZQQ2 1576 aa18.37■□□□□ 0.53
CCS-202ENST00000525435 TET3O43151 1660 aa18.36■□□□□ 0.53
CCS-202ENST00000525435 NOS1P29475 1434 aa18.36■□□□□ 0.53
CCS-202ENST00000525435 MPHOSPH9Q99550 1183 aa18.36■□□□□ 0.53
CCS-202ENST00000525435 CEP152O94986 1710 aa18.35■□□□□ 0.53
CCS-202ENST00000525435 LMTK3Q96Q04 1460 aa18.35■□□□□ 0.53
CCS-202ENST00000525435 PKD2Q13563 968 aa18.34■□□□□ 0.53
CCS-202ENST00000525435 THEMISQ8N1K5 641 aaPredicted RBP18.34■□□□□ 0.53
CCS-202ENST00000525435 IDI1Q13907 227 aa18.32■□□□□ 0.52
CCS-202ENST00000525435 A2ML1A8K2U0 1454 aa18.32■□□□□ 0.52
CCS-202ENST00000525435 PREX1Q8TCU6 1659 aa18.31■□□□□ 0.52
CCS-202ENST00000525435 PTPRTO14522 1441 aa18.31■□□□□ 0.52
CCS-202ENST00000525435 HSPA2P54652 639 aa18.29■□□□□ 0.52
CCS-202ENST00000525435 STAG3Q9UJ98 1225 aa18.26■□□□□ 0.51
CCS-202ENST00000525435 CEP170BQ9Y4F5 1589 aaPredicted RBP18.25■□□□□ 0.51
CCS-202ENST00000525435 E9PCH4 1651 aa18.25■□□□□ 0.51
CCS-202ENST00000525435 DMRT2Q9Y5R5 561 aa18.25■□□□□ 0.51
CCS-202ENST00000525435 MYO3AQ8NEV4 1616 aa18.24■□□□□ 0.51
CCS-202ENST00000525435 CFAP65Q6ZU64 1925 aaKnown RBP18.24■□□□□ 0.51
CCS-202ENST00000525435 UGGT1Q9NYU2 1555 aa18.23■□□□□ 0.51
CCS-202ENST00000525435 PLA2R1Q13018 1463 aa18.23■□□□□ 0.51
CCS-202ENST00000525435 ANKLE2Q86XL3 938 aa18.23■□□□□ 0.51
CCS-202ENST00000525435 SYNMO15061 1565 aa18.22■□□□□ 0.51
CCS-202ENST00000525435 HDGFP51858 240 aaKnown RBP18.22■□□□□ 0.51
CCS-202ENST00000525435 ZNF142P52746 1687 aaPredicted RBP18.22■□□□□ 0.51
CCS-202ENST00000525435 FOXD1Q16676 465 aa18.2■□□□□ 0.5
CCS-202ENST00000525435 EID1Q9Y6B2 187 aa18.19■□□□□ 0.5
CCS-202ENST00000525435 TRPM2O94759 1503 aa18.18■□□□□ 0.5
CCS-202ENST00000525435 TMEM2Q9UHN6 1383 aa18.17■□□□□ 0.5
CCS-202ENST00000525435 TXNDC2Q86VQ3 553 aa18.17■□□□□ 0.5
CCS-202ENST00000525435 PCGF6Q9BYE7 350 aa18.17■□□□□ 0.5
CCS-202ENST00000525435 KDM5AP29375 1690 aaKnown RBP18.17■□□□□ 0.5
CCS-202ENST00000525435 PIK3C2BO00750 1634 aa18.16■□□□□ 0.5
CCS-202ENST00000525435 CHGAP10645 457 aaKnown RBP18.16■□□□□ 0.5
CCS-202ENST00000525435 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.16■□□□□ 0.5
CCS-202ENST00000525435 ANKRD30BQ9BXX2 1392 aa18.16■□□□□ 0.5
CCS-202ENST00000525435 ARHGAP23Q9P227 1491 aa18.15■□□□□ 0.5
CCS-202ENST00000525435 NCKAP5LQ9HCH0 1330 aa18.15■□□□□ 0.5
CCS-202ENST00000525435 CCDC144AA2RUR9 1427 aa18.15■□□□□ 0.5
CCS-202ENST00000525435 SLIT1O75093 1534 aa18.14■□□□□ 0.49
CCS-202ENST00000525435 ADGRB3O60242 1522 aa18.13■□□□□ 0.49
CCS-202ENST00000525435 SPHKAPQ2M3C7 1700 aa18.13■□□□□ 0.49
CCS-202ENST00000525435 LTKP29376 864 aa18.13■□□□□ 0.49
CCS-202ENST00000525435 RPGRIP1LQ68CZ1 1315 aa18.13■□□□□ 0.49
CCS-202ENST00000525435 UBR1Q8IWV7 1749 aa18.12■□□□□ 0.49
CCS-202ENST00000525435 TMEM131LA2VDJ0 1609 aa18.1■□□□□ 0.49
CCS-202ENST00000525435 MED14O60244 1454 aa18.1■□□□□ 0.49
CCS-202ENST00000525435 SCAF11Q99590 1463 aaKnown RBP18.1■□□□□ 0.49
CCS-202ENST00000525435 ZNF326Q5BKZ1 582 aaKnown RBP18.09■□□□□ 0.49
CCS-202ENST00000525435 ZFYVE9O95405 1425 aa18.08■□□□□ 0.49
CCS-202ENST00000525435 RIMS2Q9UQ26 1411 aa18.08■□□□□ 0.49
CCS-202ENST00000525435 STRCQ7RTU9 1775 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms