RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 KHSRPQ92945 711 aaKnown RBP eCLIP9.81□□□□□ -0.845e-9■■■□□ 14.8
USP47-206ENST00000525367 GPBP1L1Q9HC44 474 aaPredicted RBP9.81□□□□□ -0.84
USP47-206ENST00000525367 FECHP22830 423 aa9.8□□□□□ -0.84
USP47-206ENST00000525367 AK7Q96M32 723 aa9.8□□□□□ -0.84
USP47-206ENST00000525367 SLC34A2O95436 690 aa9.79□□□□□ -0.84
USP47-206ENST00000525367 PBX2P40425 430 aa9.79□□□□□ -0.84
USP47-206ENST00000525367 CDHR5Q9HBB8 845 aa9.78□□□□□ -0.84
USP47-206ENST00000525367 TRIM66O15016 1216 aa9.77□□□□□ -0.85
USP47-206ENST00000525367 PCDHGA4Q9Y5G9 962 aa9.77□□□□□ -0.85
USP47-206ENST00000525367 GTF3C3Q9Y5Q9 886 aa9.77□□□□□ -0.85
USP47-206ENST00000525367 POTEEQ6S8J3 1075 aa9.76□□□□□ -0.85
USP47-206ENST00000525367 ANO8Q9HCE9 1232 aaPredicted RBP9.76□□□□□ -0.85
USP47-206ENST00000525367 PLA2G2EQ9NZK7 142 aa9.75□□□□□ -0.85
USP47-206ENST00000525367 CCDC102AQ96A19 550 aa9.74□□□□□ -0.85
USP47-206ENST00000525367 TIMELESSQ9UNS1 1208 aa9.74□□□□□ -0.85
USP47-206ENST00000525367 PDE4DQ08499 809 aa9.73□□□□□ -0.85
USP47-206ENST00000525367 RBM33Q96EV2 1170 aaKnown RBP9.73□□□□□ -0.85
USP47-206ENST00000525367 KDM4FA0A1W2PPD8 638 aa9.72□□□□□ -0.85
USP47-206ENST00000525367 GNPATO15228 680 aa9.72□□□□□ -0.85
USP47-206ENST00000525367 PTGDRQ13258 359 aa9.72□□□□□ -0.85
USP47-206ENST00000525367 HCSTQ9UBK5 93 aa9.72□□□□□ -0.85
USP47-206ENST00000525367 PCDHGA10Q9Y5H3 936 aa9.72□□□□□ -0.85
USP47-206ENST00000525367 FCHSD2O94868 740 aa9.71□□□□□ -0.86
USP47-206ENST00000525367 EN1Q05925 392 aaPredicted RBP9.71□□□□□ -0.86
USP47-206ENST00000525367 MAP2K5Q13163 448 aa9.71□□□□□ -0.86
USP47-206ENST00000525367 TSR1Q2NL82 804 aaKnown RBP9.71□□□□□ -0.86
USP47-206ENST00000525367 KDM4CQ9H3R0 1056 aa9.71□□□□□ -0.86
USP47-206ENST00000525367 NUDT7P0C024 238 aa9.7□□□□□ -0.86
USP47-206ENST00000525367 HIC1Q14526 733 aa9.7□□□□□ -0.86
USP47-206ENST00000525367 IRF6O14896 467 aa9.69□□□□□ -0.86
USP47-206ENST00000525367 PHF14O94880 888 aa9.69□□□□□ -0.86
USP47-206ENST00000525367 MINK1Q8N4C8 1332 aaPredicted RBP9.69□□□□□ -0.86
USP47-206ENST00000525367 NPDC1Q9NQX5 325 aaPredicted RBP9.69□□□□□ -0.86
USP47-206ENST00000525367 MAP3K7O43318 606 aa9.68□□□□□ -0.86
USP47-206ENST00000525367 LHX6Q9UPM6 363 aa9.68□□□□□ -0.86
USP47-206ENST00000525367 AXIN2Q9Y2T1 843 aa9.68□□□□□ -0.86
USP47-206ENST00000525367 IL27Q8NEV9 243 aa9.66□□□□□ -0.86
USP47-206ENST00000525367 EPAS1Q99814 870 aa9.66□□□□□ -0.86
USP47-206ENST00000525367 JPH4Q96JJ6 628 aa9.65□□□□□ -0.86
USP47-206ENST00000525367 FOSBP53539 338 aa9.64□□□□□ -0.87
USP47-206ENST00000525367 TYW1BQ6NUM6 668 aa9.64□□□□□ -0.87
USP47-206ENST00000525367 ADGRD1Q6QNK2 874 aa9.64□□□□□ -0.87
USP47-206ENST00000525367 PARP9Q8IXQ6 854 aa9.64□□□□□ -0.87
USP47-206ENST00000525367 ZNF454Q8N9F8 522 aa9.63□□□□□ -0.87
USP47-206ENST00000525367 AMHR2Q16671 573 aa9.62□□□□□ -0.87
USP47-206ENST00000525367 FAM161AQ3B820 660 aa9.62□□□□□ -0.87
USP47-206ENST00000525367 FAM117AQ9C073 453 aa9.62□□□□□ -0.87
USP47-206ENST00000525367 ARHGAP33O14559 1287 aa9.61□□□□□ -0.87
USP47-206ENST00000525367 PHOX2BQ99453 314 aa9.6□□□□□ -0.87
USP47-206ENST00000525367 REPIN1Q9BWE0 567 aaKnown RBP9.6□□□□□ -0.87
USP47-206ENST00000525367 ADAM33Q9BZ11 813 aa9.6□□□□□ -0.87
USP47-206ENST00000525367 TK2O00142 265 aa9.59□□□□□ -0.87
USP47-206ENST00000525367 HRO43593 1189 aa9.59□□□□□ -0.87
USP47-206ENST00000525367 NLRP7Q8WX94 980 aa9.58□□□□□ -0.88
USP47-206ENST00000525367 FBXW7Q969H0 707 aa9.58□□□□□ -0.88
USP47-206ENST00000525367 ZDHHC16Q969W1 377 aa9.58□□□□□ -0.88
USP47-206ENST00000525367 PLEKHG3A1L390 1219 aa9.57□□□□□ -0.88
USP47-206ENST00000525367 PSDA5PKW4 1024 aaPredicted RBP9.57□□□□□ -0.88
USP47-206ENST00000525367 TTLL12Q14166 644 aaPredicted RBP9.57□□□□□ -0.88
USP47-206ENST00000525367 C6orf132Q5T0Z8 1188 aa9.57□□□□□ -0.88
USP47-206ENST00000525367 PADI6Q6TGC4 694 aa9.57□□□□□ -0.88
USP47-206ENST00000525367 MS4A1P11836 297 aa9.55□□□□□ -0.88
USP47-206ENST00000525367 GIGYF2Q6Y7W6 1299 aaKnown RBP9.55□□□□□ -0.88
USP47-206ENST00000525367 MDM2Q00987 491 aaPredicted RBP9.53□□□□□ -0.88
USP47-206ENST00000525367 DMRTA1Q5VZB9 504 aa9.53□□□□□ -0.88
USP47-206ENST00000525367 COL9A1P20849 921 aa9.52□□□□□ -0.89
USP47-206ENST00000525367 C14orf37Q86TY3 774 aa9.52□□□□□ -0.89
USP47-206ENST00000525367 TMUB1Q9BVT8 246 aa9.51□□□□□ -0.89
USP47-206ENST00000525367 FAM198AQ9UFP1 575 aa9.51□□□□□ -0.89
USP47-206ENST00000525367 PSEN2P49810 448 aa9.5□□□□□ -0.89
USP47-206ENST00000525367 METTL3Q86U44 580 aaKnown RBP9.5□□□□□ -0.89
USP47-206ENST00000525367 ADGRG1Q9Y653 693 aa9.5□□□□□ -0.89
USP47-206ENST00000525367 TTC13Q8NBP0 860 aa9.49□□□□□ -0.89
USP47-206ENST00000525367 C3orf80F5H4A9 247 aa9.48□□□□□ -0.89
USP47-206ENST00000525367 RGS20O76081 388 aa9.48□□□□□ -0.89
USP47-206ENST00000525367 KCTD12Q96CX2 325 aaKnown RBP9.48□□□□□ -0.89
USP47-206ENST00000525367 PPP4R3BQ5MIZ7 849 aa9.47□□□□□ -0.89
USP47-206ENST00000525367 IFFO2Q5TF58 517 aa9.47□□□□□ -0.89
USP47-206ENST00000525367 PXYLP1Q8TE99 480 aa9.47□□□□□ -0.89
USP47-206ENST00000525367 CDCA7LQ96GN5 454 aa9.47□□□□□ -0.89
USP47-206ENST00000525367 DDRGK1Q96HY6 314 aa9.47□□□□□ -0.89
USP47-206ENST00000525367 PRSS12P56730 875 aa9.46□□□□□ -0.9
USP47-206ENST00000525367 CERKQ8TCT0 537 aa9.46□□□□□ -0.9
USP47-206ENST00000525367 GPCPD1Q9NPB8 672 aa9.46□□□□□ -0.9
USP47-206ENST00000525367 CLCN1P35523 988 aa9.45□□□□□ -0.9
USP47-206ENST00000525367 ERICH6Q7L0X2 663 aa9.45□□□□□ -0.9
USP47-206ENST00000525367 BCL2L12Q9HB09 334 aa9.45□□□□□ -0.9
USP47-206ENST00000525367 TSKSQ9UJT2 592 aa9.45□□□□□ -0.9
USP47-206ENST00000525367 SSTR3P32745 418 aaPredicted RBP9.43□□□□□ -0.9
USP47-206ENST00000525367 RBM27Q9P2N5 1060 aaKnown RBP9.43□□□□□ -0.9
USP47-206ENST00000525367 FAM217BQ9NTX9 383 aaPredicted RBP9.42□□□□□ -0.9
USP47-206ENST00000525367 PPP1R3GB7ZBB8 358 aa9.41□□□□□ -0.9
USP47-206ENST00000525367 OATP04181 439 aa9.41□□□□□ -0.9
USP47-206ENST00000525367 PTPREP23469 700 aa9.41□□□□□ -0.9
USP47-206ENST00000525367 PROX2Q3B8N5 592 aa9.41□□□□□ -0.9
USP47-206ENST00000525367 KCNK17Q96T54 332 aa9.4□□□□□ -0.9
USP47-206ENST00000525367 BEGAINQ9BUH8 593 aa9.39□□□□□ -0.91
USP47-206ENST00000525367 DAXXQ9UER7 740 aaPredicted RBP9.39□□□□□ -0.91
USP47-206ENST00000525367 VPS9D1Q9Y2B5 631 aa9.39□□□□□ -0.91
USP47-206ENST00000525367 SMAPO00193 183 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms