RNA–Protein interactions for RNA: ENST00000525275.5

SHARPIN-203, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 3

Gene SHARPIN, Length 521 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-203ENST00000525275 PTPRMP28827 1452 aa27.78■■■□□ 2.04
SHARPIN-203ENST00000525275 CNTLNQ9NXG0 1405 aa27.75■■■□□ 2.03
SHARPIN-203ENST00000525275 ANKRD50Q9ULJ7 1429 aa27.75■■■□□ 2.03
SHARPIN-203ENST00000525275 RNF17Q9BXT8 1623 aaKnown RBP27.74■■■□□ 2.03
SHARPIN-203ENST00000525275 WASHC2CQ9Y4E1 1318 aa27.69■■■□□ 2.02
SHARPIN-203ENST00000525275 FAM135AQ9P2D6 1515 aa27.68■■■□□ 2.02
SHARPIN-203ENST00000525275 CLTCQ00610 1675 aaKnown RBP27.68■■■□□ 2.02
SHARPIN-203ENST00000525275 PLPPR3Q6T4P5 718 aa27.67■■■□□ 2.02
SHARPIN-203ENST00000525275 MROH2AA6NES4 1674 aa27.66■■■□□ 2.02
SHARPIN-203ENST00000525275 MROH1Q8NDA8 1641 aa27.66■■■□□ 2.02
SHARPIN-203ENST00000525275 ZMYM3Q14202 1370 aa27.65■■■□□ 2.02
SHARPIN-203ENST00000525275 CEBPAP49715 358 aaPredicted RBP27.65■■■□□ 2.02
SHARPIN-203ENST00000525275 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.65■■■□□ 2.022e-7■□□□□ 9.7
SHARPIN-203ENST00000525275 KDM5DQ9BY66 1539 aa27.65■■■□□ 2.02
SHARPIN-203ENST00000525275 DEPDC5O75140 1603 aa27.64■■■□□ 2.02
SHARPIN-203ENST00000525275 PRDM15P57071 1507 aaPredicted RBP27.62■■■□□ 2.01
SHARPIN-203ENST00000525275 KANK1Q14678 1352 aa27.62■■■□□ 2.01
SHARPIN-203ENST00000525275 NAIPQ13075 1403 aa27.62■■■□□ 2.01
SHARPIN-203ENST00000525275 C3P01024 1663 aa27.62■■■□□ 2.01
SHARPIN-203ENST00000525275 HFM1A2PYH4 1435 aa27.61■■■□□ 2.01
SHARPIN-203ENST00000525275 ZC3H13Q5T200 1668 aaKnown RBP27.59■■■□□ 2.01
SHARPIN-203ENST00000525275 ABCC3O15438 1527 aa27.59■■■□□ 2.01
SHARPIN-203ENST00000525275 GCC2Q8IWJ2 1684 aa27.59■■■□□ 2.01
SHARPIN-203ENST00000525275 CEP152O94986 1710 aa27.54■■■□□ 2
SHARPIN-203ENST00000525275 VWDEQ8N2E2 1590 aa27.54■■■□□ 2
SHARPIN-203ENST00000525275 UNC13BO14795 1591 aa27.53■■■□□ 2
SHARPIN-203ENST00000525275 NPATQ14207 1427 aa27.5■■□□□ 1.99
SHARPIN-203ENST00000525275 SETD1BQ9UPS6 1966 aaKnown RBP27.5■■□□□ 1.99
SHARPIN-203ENST00000525275 LMTK2Q8IWU2 1503 aa27.5■■□□□ 1.99
SHARPIN-203ENST00000525275 PZPP20742 1482 aa27.5■■□□□ 1.99
SHARPIN-203ENST00000525275 CAMSAP1Q5T5Y3 1602 aa27.49■■□□□ 1.99
SHARPIN-203ENST00000525275 NUP155O75694 1391 aa27.48■■□□□ 1.99
SHARPIN-203ENST00000525275 ARHGAP31Q2M1Z3 1444 aa27.47■■□□□ 1.99
SHARPIN-203ENST00000525275 FBXO31Q5XUX0 539 aaPredicted RBP27.46■■□□□ 1.99
SHARPIN-203ENST00000525275 SETD5Q9C0A6 1442 aa27.43■■□□□ 1.98
SHARPIN-203ENST00000525275 IQGAP3Q86VI3 1631 aa27.43■■□□□ 1.98
SHARPIN-203ENST00000525275 PREX1Q8TCU6 1659 aa27.42■■□□□ 1.98
SHARPIN-203ENST00000525275 TRIM52Q96A61 297 aa27.41■■□□□ 1.98
SHARPIN-203ENST00000525275 TET3O43151 1660 aa27.4■■□□□ 1.98
SHARPIN-203ENST00000525275 EFCAB6Q5THR3 1501 aa27.4■■□□□ 1.98
SHARPIN-203ENST00000525275 UHRF1BP1Q6BDS2 1440 aa27.4■■□□□ 1.98
SHARPIN-203ENST00000525275 CFAP65Q6ZU64 1925 aaKnown RBP27.39■■□□□ 1.98
SHARPIN-203ENST00000525275 TNRQ92752 1358 aa27.39■■□□□ 1.98
SHARPIN-203ENST00000525275 ACIN1Q9UKV3 1341 aaKnown RBP27.38■■□□□ 1.97
SHARPIN-203ENST00000525275 ERVK-7P63135 1459 aa27.38■■□□□ 1.97
SHARPIN-203ENST00000525275 LMTK3Q96Q04 1460 aa27.37■■□□□ 1.97
SHARPIN-203ENST00000525275 SPATA31D1Q6ZQQ2 1576 aa27.36■■□□□ 1.97
SHARPIN-203ENST00000525275 TRIM26Q12899 539 aaPredicted RBP27.35■■□□□ 1.97
SHARPIN-203ENST00000525275 RPRD2Q5VT52 1461 aaKnown RBP27.35■■□□□ 1.97
SHARPIN-203ENST00000525275 RAB3GAP2Q9H2M9 1393 aa27.34■■□□□ 1.97
SHARPIN-203ENST00000525275 MYO3AQ8NEV4 1616 aa27.32■■□□□ 1.96
SHARPIN-203ENST00000525275 E9PCH4 1651 aa27.3■■□□□ 1.96
SHARPIN-203ENST00000525275 NLRP1Q9C000 1473 aa27.29■■□□□ 1.96
SHARPIN-203ENST00000525275 NOS1P29475 1434 aa27.28■■□□□ 1.96
SHARPIN-203ENST00000525275 HRCP23327 699 aa27.28■■□□□ 1.96
SHARPIN-203ENST00000525275 SLC4A1APQ9BWU0 796 aaKnown RBP27.28■■□□□ 1.96
SHARPIN-203ENST00000525275 HSPA2P54652 639 aa27.27■■□□□ 1.96
SHARPIN-203ENST00000525275 A2ML1A8K2U0 1454 aa27.26■■□□□ 1.95
SHARPIN-203ENST00000525275 CEP170BQ9Y4F5 1589 aaPredicted RBP27.26■■□□□ 1.95
SHARPIN-203ENST00000525275 ZNF142P52746 1687 aaPredicted RBP27.25■■□□□ 1.95
SHARPIN-203ENST00000525275 PKD2Q13563 968 aa27.23■■□□□ 1.95
SHARPIN-203ENST00000525275 MPHOSPH9Q99550 1183 aa27.22■■□□□ 1.95
SHARPIN-203ENST00000525275 SYNMO15061 1565 aa27.22■■□□□ 1.95
SHARPIN-203ENST00000525275 SLC52A1Q9NWF4 448 aa27.21■■□□□ 1.95
SHARPIN-203ENST00000525275 IDI1Q13907 227 aa27.19■■□□□ 1.94
SHARPIN-203ENST00000525275 UGGT1Q9NYU2 1555 aa27.18■■□□□ 1.94
SHARPIN-203ENST00000525275 THEMISQ8N1K5 641 aaPredicted RBP27.17■■□□□ 1.94
SHARPIN-203ENST00000525275 PTPRTO14522 1441 aa27.16■■□□□ 1.94
SHARPIN-203ENST00000525275 SPHKAPQ2M3C7 1700 aa27.14■■□□□ 1.94
SHARPIN-203ENST00000525275 PIK3C2BO00750 1634 aa27.13■■□□□ 1.93
SHARPIN-203ENST00000525275 STAG3Q9UJ98 1225 aa27.13■■□□□ 1.93
SHARPIN-203ENST00000525275 UBR1Q8IWV7 1749 aa27.11■■□□□ 1.93
SHARPIN-203ENST00000525275 FOXD1Q16676 465 aa27.1■■□□□ 1.93
SHARPIN-203ENST00000525275 PLA2R1Q13018 1463 aa27.1■■□□□ 1.93
SHARPIN-203ENST00000525275 KDM5AP29375 1690 aaKnown RBP27.09■■□□□ 1.93
SHARPIN-203ENST00000525275 TRPM2O94759 1503 aa27.07■■□□□ 1.92
SHARPIN-203ENST00000525275 STRCQ7RTU9 1775 aa27.07■■□□□ 1.92
SHARPIN-203ENST00000525275 ADGRB3O60242 1522 aa27.05■■□□□ 1.92
SHARPIN-203ENST00000525275 CHGAP10645 457 aaKnown RBP27.04■■□□□ 1.92
SHARPIN-203ENST00000525275 NCKAP5LQ9HCH0 1330 aa27.04■■□□□ 1.92
SHARPIN-203ENST00000525275 ANKLE2Q86XL3 938 aa27.03■■□□□ 1.92
SHARPIN-203ENST00000525275 DMRT2Q9Y5R5 561 aa27.03■■□□□ 1.92
SHARPIN-203ENST00000525275 TMEM131LA2VDJ0 1609 aa27.01■■□□□ 1.92
SHARPIN-203ENST00000525275 CLTCL1P53675 1640 aa27■■□□□ 1.91
SHARPIN-203ENST00000525275 SLIT1O75093 1534 aa27■■□□□ 1.91
SHARPIN-203ENST00000525275 TMEM2Q9UHN6 1383 aa26.99■■□□□ 1.91
SHARPIN-203ENST00000525275 ARHGAP23Q9P227 1491 aa26.99■■□□□ 1.91
SHARPIN-203ENST00000525275 MYO5BQ9ULV0 1848 aa26.97■■□□□ 1.91
SHARPIN-203ENST00000525275 PCGF6Q9BYE7 350 aa26.97■■□□□ 1.91
SHARPIN-203ENST00000525275 EID1Q9Y6B2 187 aa26.97■■□□□ 1.91
SHARPIN-203ENST00000525275 POLR1AO95602 1720 aaPredicted RBP26.96■■□□□ 1.91
SHARPIN-203ENST00000525275 TXNDC2Q86VQ3 553 aa26.96■■□□□ 1.91
SHARPIN-203ENST00000525275 CCDC144AA2RUR9 1427 aa26.96■■□□□ 1.91
SHARPIN-203ENST00000525275 KIF1BO60333 1816 aa26.95■■□□□ 1.9
SHARPIN-203ENST00000525275 HDGFP51858 240 aaKnown RBP26.94■■□□□ 1.9
SHARPIN-203ENST00000525275 LTKP29376 864 aa26.93■■□□□ 1.9
SHARPIN-203ENST00000525275 ANKRD30BQ9BXX2 1392 aa26.92■■□□□ 1.9
SHARPIN-203ENST00000525275 SCAF11Q99590 1463 aaKnown RBP26.92■■□□□ 1.9
SHARPIN-203ENST00000525275 MED14O60244 1454 aa26.91■■□□□ 1.9
SHARPIN-203ENST00000525275 NEURL4Q96JN8 1562 aa26.91■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms