RNA–Protein interactions for RNA: ENST00000524627.5

SF3B2-203, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-203ENST00000524627 DNMT1P26358 1616 aaKnown RBP20.43■□□□□ 0.86
SF3B2-203ENST00000524627 SOCS7O14512 581 aa20.43■□□□□ 0.86
SF3B2-203ENST00000524627 CAMSAP2Q08AD1 1489 aa20.43■□□□□ 0.86
SF3B2-203ENST00000524627 FBXO31Q5XUX0 539 aaPredicted RBP20.41■□□□□ 0.86
SF3B2-203ENST00000524627 TNRQ92752 1358 aa20.41■□□□□ 0.86
SF3B2-203ENST00000524627 KDM5DQ9BY66 1539 aa20.4■□□□□ 0.86
SF3B2-203ENST00000524627 PZPP20742 1482 aa20.38■□□□□ 0.85
SF3B2-203ENST00000524627 WASHC2CQ9Y4E1 1318 aa20.38■□□□□ 0.85
SF3B2-203ENST00000524627 RSPH4AQ5TD94 716 aa20.37■□□□□ 0.85
SF3B2-203ENST00000524627 FAM135AQ9P2D6 1515 aa20.37■□□□□ 0.85
SF3B2-203ENST00000524627 POLR1AO95602 1720 aaPredicted RBP20.36■□□□□ 0.85
SF3B2-203ENST00000524627 NEURL4Q96JN8 1562 aa20.35■□□□□ 0.85
SF3B2-203ENST00000524627 ARHGEF5Q12774 1597 aa20.34■□□□□ 0.85
SF3B2-203ENST00000524627 TSPY4P0CV99 314 aa20.33■□□□□ 0.85
SF3B2-203ENST00000524627 TSPY10P0CW01 314 aa20.33■□□□□ 0.85
SF3B2-203ENST00000524627 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.33■□□□□ 0.84
SF3B2-203ENST00000524627 SCAF1Q9H7N4 1312 aaKnown RBP20.31■□□□□ 0.84
SF3B2-203ENST00000524627 MIA2Q96PC5 1412 aa20.31■□□□□ 0.84
SF3B2-203ENST00000524627 ANKLE2Q86XL3 938 aa20.3■□□□□ 0.84
SF3B2-203ENST00000524627 NLRP1Q9C000 1473 aa20.3■□□□□ 0.84
SF3B2-203ENST00000524627 SHANK2Q9UPX8 1470 aa20.3■□□□□ 0.84
SF3B2-203ENST00000524627 CPS1P31327 1500 aa20.29■□□□□ 0.84
SF3B2-203ENST00000524627 THEMISQ8N1K5 641 aaPredicted RBP20.29■□□□□ 0.84
SF3B2-203ENST00000524627 UGGT1Q9NYU2 1555 aa20.29■□□□□ 0.84
SF3B2-203ENST00000524627 PIP4K2BP78356 416 aa20.28■□□□□ 0.84
SF3B2-203ENST00000524627 LRRC9Q6ZRR7 1453 aa20.28■□□□□ 0.84
SF3B2-203ENST00000524627 RNF17Q9BXT8 1623 aaKnown RBP20.26■□□□□ 0.83
SF3B2-203ENST00000524627 TOM1O60784 492 aa20.25■□□□□ 0.83
SF3B2-203ENST00000524627 HSPA1LP34931 641 aa20.25■□□□□ 0.83
SF3B2-203ENST00000524627 NPHP4O75161 1426 aaPredicted RBP20.25■□□□□ 0.83
SF3B2-203ENST00000524627 VPS8Q8N3P4 1428 aa20.25■□□□□ 0.83
SF3B2-203ENST00000524627 VWDEQ8N2E2 1590 aa20.25■□□□□ 0.83
SF3B2-203ENST00000524627 ABCC3O15438 1527 aa20.24■□□□□ 0.83
SF3B2-203ENST00000524627 MAST1Q9Y2H9 1570 aa20.24■□□□□ 0.83
SF3B2-203ENST00000524627 DEPDC5O75140 1603 aa20.23■□□□□ 0.83
SF3B2-203ENST00000524627 MED14O60244 1454 aa20.23■□□□□ 0.83
SF3B2-203ENST00000524627 ZC3H13Q5T200 1668 aaKnown RBP20.22■□□□□ 0.83
SF3B2-203ENST00000524627 EIF2AK4Q9P2K8 1649 aaKnown RBP20.2■□□□□ 0.82
SF3B2-203ENST00000524627 IQGAP1P46940 1657 aa20.2■□□□□ 0.82
SF3B2-203ENST00000524627 LOC105371045A0A1W2PR82 267 aa20.2■□□□□ 0.82
SF3B2-203ENST00000524627 KANK4Q5T7N3 995 aaPredicted RBP20.2■□□□□ 0.82
SF3B2-203ENST00000524627 ERVK-7P63135 1459 aa20.19■□□□□ 0.82
SF3B2-203ENST00000524627 MROH1Q8NDA8 1641 aa20.18■□□□□ 0.82
SF3B2-203ENST00000524627 MYOM3Q5VTT5 1437 aa20.18■□□□□ 0.82
SF3B2-203ENST00000524627 MED1Q15648 1581 aaPredicted RBP20.17■□□□□ 0.82
SF3B2-203ENST00000524627 CEP152O94986 1710 aa20.17■□□□□ 0.82
SF3B2-203ENST00000524627 CFAP65Q6ZU64 1925 aaKnown RBP20.15■□□□□ 0.82
SF3B2-203ENST00000524627 STRCP1A6NGW2 1772 aa20.14■□□□□ 0.81
SF3B2-203ENST00000524627 ALKQ9UM73 1620 aa20.14■□□□□ 0.81
SF3B2-203ENST00000524627 MAP3K1Q13233 1512 aa20.14■□□□□ 0.81
SF3B2-203ENST00000524627 DUOX2Q9NRD8 1548 aa20.14■□□□□ 0.81
SF3B2-203ENST00000524627 UBR1Q8IWV7 1749 aa20.12■□□□□ 0.81
SF3B2-203ENST00000524627 LRRC7Q96NW7 1537 aa20.12■□□□□ 0.81
SF3B2-203ENST00000524627 KIF15Q9NS87 1388 aa20.1■□□□□ 0.81
SF3B2-203ENST00000524627 SENP3Q9H4L4 574 aaPredicted RBP20.1■□□□□ 0.81
SF3B2-203ENST00000524627 SYNMO15061 1565 aa20.09■□□□□ 0.81
SF3B2-203ENST00000524627 SCAF11Q99590 1463 aaKnown RBP20.09■□□□□ 0.81
SF3B2-203ENST00000524627 RRP7BPQ9NSQ0 103 aa20.08■□□□□ 0.81
SF3B2-203ENST00000524627 PRDM15P57071 1507 aaPredicted RBP20.07■□□□□ 0.8
SF3B2-203ENST00000524627 ABCC5O15440 1437 aa20.07■□□□□ 0.8
SF3B2-203ENST00000524627 CROCC2H7BZ55 1655 aa20.07■□□□□ 0.8
SF3B2-203ENST00000524627 LTKP29376 864 aa20.06■□□□□ 0.8
SF3B2-203ENST00000524627 TXNDC2Q86VQ3 553 aa20.06■□□□□ 0.8
SF3B2-203ENST00000524627 ERBINQ96RT1 1412 aa20.06■□□□□ 0.8
SF3B2-203ENST00000524627 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.06■□□□□ 0.84e-13■■□□□ 13.4
SF3B2-203ENST00000524627 ARHGAP31Q2M1Z3 1444 aa20.05■□□□□ 0.8
SF3B2-203ENST00000524627 PHF23Q9BUL5 403 aaPredicted RBP20.05■□□□□ 0.8
SF3B2-203ENST00000524627 PTPN23Q9H3S7 1636 aa20.05■□□□□ 0.8
SF3B2-203ENST00000524627 ARHGAP23Q9P227 1491 aa20.05■□□□□ 0.8
SF3B2-203ENST00000524627 SLIT1O75093 1534 aa20.04■□□□□ 0.8
SF3B2-203ENST00000524627 EID1Q9Y6B2 187 aa20.02■□□□□ 0.8
SF3B2-203ENST00000524627 DAPK1P53355 1430 aa20.02■□□□□ 0.79
SF3B2-203ENST00000524627 APLP2Q06481 763 aa20.01■□□□□ 0.79
SF3B2-203ENST00000524627 PIK3C2BO00750 1634 aa20.01■□□□□ 0.79
SF3B2-203ENST00000524627 KANK1Q14678 1352 aa20■□□□□ 0.79
SF3B2-203ENST00000524627 STAG3Q9UJ98 1225 aa19.99■□□□□ 0.79
SF3B2-203ENST00000524627 TMEM2Q9UHN6 1383 aa19.98■□□□□ 0.79
SF3B2-203ENST00000524627 CHIC2Q9UKJ5 165 aa19.98■□□□□ 0.79
SF3B2-203ENST00000524627 FGD6Q6ZV73 1430 aa19.98■□□□□ 0.79
SF3B2-203ENST00000524627 XIRP1Q702N8 1843 aaKnown RBP19.96■□□□□ 0.79
SF3B2-203ENST00000524627 ANKRD30AQ9BXX3 1397 aa19.95■□□□□ 0.79
SF3B2-203ENST00000524627 EFCAB6Q5THR3 1501 aa19.94■□□□□ 0.78
SF3B2-203ENST00000524627 IDI1Q13907 227 aa19.94■□□□□ 0.78
SF3B2-203ENST00000524627 LMTK2Q8IWU2 1503 aa19.93■□□□□ 0.78
SF3B2-203ENST00000524627 KDM5AP29375 1690 aaKnown RBP19.91■□□□□ 0.78
SF3B2-203ENST00000524627 TMEM94Q12767 1356 aa19.89■□□□□ 0.77
SF3B2-203ENST00000524627 SLC26A8Q96RN1 970 aa19.89■□□□□ 0.77
SF3B2-203ENST00000524627 NOS1P29475 1434 aa19.88■□□□□ 0.77
SF3B2-203ENST00000524627 ADGRB3O60242 1522 aa19.87■□□□□ 0.77
SF3B2-203ENST00000524627 KCNA6P17658 529 aa19.87■□□□□ 0.77
SF3B2-203ENST00000524627 FAM135BQ49AJ0 1406 aa19.86■□□□□ 0.77
SF3B2-203ENST00000524627 PROSER2Q86WR7 435 aaPredicted RBP19.86■□□□□ 0.77
SF3B2-203ENST00000524627 RBM33Q96EV2 1170 aaKnown RBP19.86■□□□□ 0.77
SF3B2-203ENST00000524627 TET3O43151 1660 aa19.86■□□□□ 0.77
SF3B2-203ENST00000524627 FAM50AQ14320 339 aaKnown RBP19.84■□□□□ 0.77
SF3B2-203ENST00000524627 BCANQ96GW7 911 aa19.84■□□□□ 0.77
SF3B2-203ENST00000524627 RGS17Q9UGC6 210 aaPredicted RBP19.84■□□□□ 0.77
SF3B2-203ENST00000524627 ADGRL2O95490 1459 aa19.84■□□□□ 0.77
SF3B2-203ENST00000524627 SLC52A1Q9NWF4 448 aa19.83■□□□□ 0.77
SF3B2-203ENST00000524627 ROBO1Q9Y6N7 1651 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms