RNA–Protein interactions for RNA: ENST00000524478.1

MMP3-203, Transcript of matrix metallopeptidase 3, humanhuman

TSL 4

Gene MMP3, Length 559 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3-203ENST00000524478 STRCP1A6NGW2 1772 aa15.61■□□□□ 0.09
MMP3-203ENST00000524478 KDM5DQ9BY66 1539 aa15.6■□□□□ 0.09
MMP3-203ENST00000524478 FAM135AQ9P2D6 1515 aa15.6■□□□□ 0.09
MMP3-203ENST00000524478 PPP6R1Q9UPN7 881 aa15.6■□□□□ 0.09
MMP3-203ENST00000524478 PZPP20742 1482 aa15.59■□□□□ 0.09
MMP3-203ENST00000524478 EHBP1L1Q8N3D4 1523 aa15.59■□□□□ 0.09
MMP3-203ENST00000524478 CCNB3Q8WWL7 1395 aa15.58■□□□□ 0.08
MMP3-203ENST00000524478 SHANK2Q9UPX8 1470 aa15.58■□□□□ 0.08
MMP3-203ENST00000524478 DEPDC5O75140 1603 aa15.57■□□□□ 0.08
MMP3-203ENST00000524478 IQGAP1P46940 1657 aa15.57■□□□□ 0.08
MMP3-203ENST00000524478 HSPA1LP34931 641 aa15.57■□□□□ 0.08
MMP3-203ENST00000524478 GGT6Q6P531 493 aa15.56■□□□□ 0.08
MMP3-203ENST00000524478 TNRQ92752 1358 aa15.56■□□□□ 0.08
MMP3-203ENST00000524478 ZNF644Q9H582 1327 aaPredicted RBP15.55■□□□□ 0.08
MMP3-203ENST00000524478 CFDP1Q9UEE9 299 aaPredicted RBP15.55■□□□□ 0.08
MMP3-203ENST00000524478 RNF17Q9BXT8 1623 aaKnown RBP15.54■□□□□ 0.08
MMP3-203ENST00000524478 SYNMO15061 1565 aa15.54■□□□□ 0.08
MMP3-203ENST00000524478 RTEL1-TNFRSF6BF6WH68 1400 aa15.54■□□□□ 0.08
MMP3-203ENST00000524478 ZC3H13Q5T200 1668 aaKnown RBP15.53■□□□□ 0.08
MMP3-203ENST00000524478 MED14O60244 1454 aa15.52■□□□□ 0.08
MMP3-203ENST00000524478 CCDC141Q6ZP82 1450 aa15.52■□□□□ 0.08
MMP3-203ENST00000524478 MTUS2Q5JR59 1369 aa15.52■□□□□ 0.08
MMP3-203ENST00000524478 CAMSAP2Q08AD1 1489 aa15.52■□□□□ 0.07
MMP3-203ENST00000524478 DHX29Q7Z478 1369 aaKnown RBP15.51■□□□□ 0.07
MMP3-203ENST00000524478 UGGT1Q9NYU2 1555 aa15.51■□□□□ 0.07
MMP3-203ENST00000524478 CEP162Q5TB80 1403 aa15.51■□□□□ 0.07
MMP3-203ENST00000524478 SCAF1Q9H7N4 1312 aaKnown RBP15.5■□□□□ 0.07
MMP3-203ENST00000524478 PIP4K2BP78356 416 aa15.5■□□□□ 0.07
MMP3-203ENST00000524478 FBXO31Q5XUX0 539 aaPredicted RBP15.5■□□□□ 0.07
MMP3-203ENST00000524478 NLRP1Q9C000 1473 aa15.5■□□□□ 0.07
MMP3-203ENST00000524478 MROH1Q8NDA8 1641 aa15.5■□□□□ 0.07
MMP3-203ENST00000524478 XIRP1Q702N8 1843 aaKnown RBP15.49■□□□□ 0.07
MMP3-203ENST00000524478 NPHP4O75161 1426 aaPredicted RBP15.49■□□□□ 0.07
MMP3-203ENST00000524478 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.49■□□□□ 0.07
MMP3-203ENST00000524478 ARHGEF5Q12774 1597 aa15.48■□□□□ 0.07
MMP3-203ENST00000524478 ABCC3O15438 1527 aa15.48■□□□□ 0.07
MMP3-203ENST00000524478 CEP152O94986 1710 aa15.47■□□□□ 0.07
MMP3-203ENST00000524478 UBR1Q8IWV7 1749 aa15.47■□□□□ 0.07
MMP3-203ENST00000524478 PIAS4Q8N2W9 510 aaPredicted RBP15.47■□□□□ 0.07
MMP3-203ENST00000524478 LRRC7Q96NW7 1537 aa15.47■□□□□ 0.07
MMP3-203ENST00000524478 NCOA2Q15596 1464 aa15.46■□□□□ 0.06
MMP3-203ENST00000524478 MIA2Q96PC5 1412 aa15.45■□□□□ 0.06
MMP3-203ENST00000524478 EIF2AK4Q9P2K8 1649 aaKnown RBP15.44■□□□□ 0.06
MMP3-203ENST00000524478 TOM1O60784 492 aa15.44■□□□□ 0.06
MMP3-203ENST00000524478 KIF3BO15066 747 aa15.43■□□□□ 0.06
MMP3-203ENST00000524478 ERVK-7P63135 1459 aa15.43■□□□□ 0.06
MMP3-203ENST00000524478 MAST1Q9Y2H9 1570 aa15.43■□□□□ 0.06
MMP3-203ENST00000524478 CFAP65Q6ZU64 1925 aaKnown RBP15.41■□□□□ 0.06
MMP3-203ENST00000524478 ANKLE2Q86XL3 938 aa15.39■□□□□ 0.05
MMP3-203ENST00000524478 WASHC2CQ9Y4E1 1318 aa15.38■□□□□ 0.05
MMP3-203ENST00000524478 SCAF11Q99590 1463 aaKnown RBP15.36■□□□□ 0.05
MMP3-203ENST00000524478 ARHGAP23Q9P227 1491 aa15.36■□□□□ 0.05
MMP3-203ENST00000524478 SLIT1O75093 1534 aa15.36■□□□□ 0.05
MMP3-203ENST00000524478 PRDM15P57071 1507 aaPredicted RBP15.35■□□□□ 0.05
MMP3-203ENST00000524478 THEMISQ8N1K5 641 aaPredicted RBP15.35■□□□□ 0.05
MMP3-203ENST00000524478 CROCC2H7BZ55 1655 aa15.35■□□□□ 0.05
MMP3-203ENST00000524478 PIK3C2BO00750 1634 aa15.34■□□□□ 0.05
MMP3-203ENST00000524478 SETD1AO15047 1707 aaKnown RBP15.34■□□□□ 0.05
MMP3-203ENST00000524478 RGS17Q9UGC6 210 aaPredicted RBP15.32■□□□□ 0.04
MMP3-203ENST00000524478 MAP3K1Q13233 1512 aa15.31■□□□□ 0.04
MMP3-203ENST00000524478 ROBO1Q9Y6N7 1651 aa15.31■□□□□ 0.04
MMP3-203ENST00000524478 KDM5AP29375 1690 aaKnown RBP15.29■□□□□ 0.04
MMP3-203ENST00000524478 DUOX2Q9NRD8 1548 aa15.28■□□□□ 0.04
MMP3-203ENST00000524478 LRRC9Q6ZRR7 1453 aa15.27■□□□□ 0.04
MMP3-203ENST00000524478 NWD1Q149M9 1564 aa15.27■□□□□ 0.03
MMP3-203ENST00000524478 LTKP29376 864 aa15.26■□□□□ 0.03
MMP3-203ENST00000524478 ARHGAP31Q2M1Z3 1444 aa15.26■□□□□ 0.03
MMP3-203ENST00000524478 RSPH4AQ5TD94 716 aa15.25■□□□□ 0.03
MMP3-203ENST00000524478 FAM135BQ49AJ0 1406 aa15.23■□□□□ 0.03
MMP3-203ENST00000524478 EFCAB6Q5THR3 1501 aa15.22■□□□□ 0.03
MMP3-203ENST00000524478 TET3O43151 1660 aa15.22■□□□□ 0.03
MMP3-203ENST00000524478 MYOM3Q5VTT5 1437 aa15.22■□□□□ 0.03
MMP3-203ENST00000524478 ERBINQ96RT1 1412 aa15.21■□□□□ 0.03
MMP3-203ENST00000524478 TSPY4P0CV99 314 aa15.21■□□□□ 0.03
MMP3-203ENST00000524478 TSPY10P0CW01 314 aa15.21■□□□□ 0.03
MMP3-203ENST00000524478 MYO5BQ9ULV0 1848 aa15.21■□□□□ 0.03
MMP3-203ENST00000524478 ADGRB3O60242 1522 aa15.21■□□□□ 0.03
MMP3-203ENST00000524478 TMEM2Q9UHN6 1383 aa15.21■□□□□ 0.02
MMP3-203ENST00000524478 VPS8Q8N3P4 1428 aa15.2■□□□□ 0.02
MMP3-203ENST00000524478 TMEM94Q12767 1356 aa15.2■□□□□ 0.02
MMP3-203ENST00000524478 KIF15Q9NS87 1388 aa15.2■□□□□ 0.02
MMP3-203ENST00000524478 PHLPP1O60346 1717 aa15.2■□□□□ 0.02
MMP3-203ENST00000524478 NKTRP30414 1462 aaKnown RBP15.2■□□□□ 0.02
MMP3-203ENST00000524478 LMTK2Q8IWU2 1503 aa15.19■□□□□ 0.02
MMP3-203ENST00000524478 COL16A1Q07092 1604 aaPredicted RBP15.19■□□□□ 0.02
MMP3-203ENST00000524478 POTEAQ6S8J7 498 aa15.19■□□□□ 0.02
MMP3-203ENST00000524478 PTPN23Q9H3S7 1636 aa15.18■□□□□ 0.02
MMP3-203ENST00000524478 SRCAPQ6ZRS2 3230 aa15.18■□□□□ 0.02
MMP3-203ENST00000524478 TXNDC2Q86VQ3 553 aa15.17■□□□□ 0.02
MMP3-203ENST00000524478 ABCC5O15440 1437 aa15.16■□□□□ 0.02
MMP3-203ENST00000524478 GCC2Q8IWJ2 1684 aa15.15■□□□□ 0.02
MMP3-203ENST00000524478 CHD2O14647 1828 aaKnown RBP15.15■□□□□ 0.02
MMP3-203ENST00000524478 ADRA2BP18089 450 aa15.14■□□□□ 0.01
MMP3-203ENST00000524478 LRP6O75581 1613 aa15.14■□□□□ 0.01
MMP3-203ENST00000524478 NOS1P29475 1434 aa15.13■□□□□ 0.01
MMP3-203ENST00000524478 KANK4Q5T7N3 995 aaPredicted RBP15.13■□□□□ 0.01
MMP3-203ENST00000524478 DAPK1P53355 1430 aa15.12■□□□□ 0.01
MMP3-203ENST00000524478 RBM33Q96EV2 1170 aaKnown RBP15.11■□□□□ 0.01
MMP3-203ENST00000524478 EID1Q9Y6B2 187 aa15.1■□□□□ 0.01
MMP3-203ENST00000524478 SHPRHQ149N8 1683 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms