RNA–Protein interactions for RNA: ENST00000524417.1

MKNK1-216, Transcript of MAP kinase interacting serine/threonine kinase 1, humanhuman

TSL 4

Gene MKNK1, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKNK1-216ENST00000524417 IQGAP1P46940 1657 aa13.85□□□□□ -0.19
MKNK1-216ENST00000524417 SETD1AO15047 1707 aaKnown RBP13.84□□□□□ -0.19
MKNK1-216ENST00000524417 PLXNC1O60486 1568 aa13.84□□□□□ -0.19
MKNK1-216ENST00000524417 ADGBQ8N7X0 1667 aa13.84□□□□□ -0.19
MKNK1-216ENST00000524417 DEPDC5O75140 1603 aa13.83□□□□□ -0.2
MKNK1-216ENST00000524417 EHMT2Q96KQ7 1210 aa13.83□□□□□ -0.2
MKNK1-216ENST00000524417 LRRC7Q96NW7 1537 aa13.83□□□□□ -0.2
MKNK1-216ENST00000524417 LRRIQ1Q96JM4 1722 aa13.82□□□□□ -0.2
MKNK1-216ENST00000524417 UGGT1Q9NYU2 1555 aa13.82□□□□□ -0.2
MKNK1-216ENST00000524417 CCDC18Q5T9S5 1454 aa13.81□□□□□ -0.2
MKNK1-216ENST00000524417 INO80Q9ULG1 1556 aaPredicted RBP13.81□□□□□ -0.2
MKNK1-216ENST00000524417 MED14O60244 1454 aa13.8□□□□□ -0.2
MKNK1-216ENST00000524417 PLEKHH2Q8IVE3 1493 aa13.8□□□□□ -0.2
MKNK1-216ENST00000524417 FBXO31Q5XUX0 539 aaPredicted RBP13.8□□□□□ -0.2
MKNK1-216ENST00000524417 STRCP1A6NGW2 1772 aa13.79□□□□□ -0.2
MKNK1-216ENST00000524417 NLRP1Q9C000 1473 aa13.79□□□□□ -0.2
MKNK1-216ENST00000524417 LOC105371045A0A1W2PR82 267 aa13.78□□□□□ -0.2
MKNK1-216ENST00000524417 ARHGAP35Q9NRY4 1499 aa13.78□□□□□ -0.2
MKNK1-216ENST00000524417 PZPP20742 1482 aa13.77□□□□□ -0.21
MKNK1-216ENST00000524417 CFDP1Q9UEE9 299 aaPredicted RBP13.77□□□□□ -0.21
MKNK1-216ENST00000524417 WASHC2CQ9Y4E1 1318 aa13.77□□□□□ -0.21
MKNK1-216ENST00000524417 KDM5DQ9BY66 1539 aa13.75□□□□□ -0.21
MKNK1-216ENST00000524417 MIA2Q96PC5 1412 aa13.75□□□□□ -0.21
MKNK1-216ENST00000524417 KIAA1107Q9UPP5 1409 aa13.75□□□□□ -0.21
MKNK1-216ENST00000524417 KIF3BO15066 747 aa13.75□□□□□ -0.21
MKNK1-216ENST00000524417 UPF1Q92900 1129 aaKnown RBP eCLIP13.74□□□□□ -0.21
MKNK1-216ENST00000524417 FAM135BQ49AJ0 1406 aa13.73□□□□□ -0.21
MKNK1-216ENST00000524417 CCNB3Q8WWL7 1395 aa13.72□□□□□ -0.21
MKNK1-216ENST00000524417 MEX3CQ5U5Q3 659 aaKnown RBP13.72□□□□□ -0.21
MKNK1-216ENST00000524417 TRIM52Q96A61 297 aa13.72□□□□□ -0.21
MKNK1-216ENST00000524417 GPATCH8Q9UKJ3 1502 aaKnown RBP13.72□□□□□ -0.21
MKNK1-216ENST00000524417 DHX29Q7Z478 1369 aaKnown RBP13.71□□□□□ -0.22
MKNK1-216ENST00000524417 CASKIN1Q8WXD9 1431 aa13.7□□□□□ -0.22
MKNK1-216ENST00000524417 ROBO1Q9Y6N7 1651 aa13.69□□□□□ -0.22
MKNK1-216ENST00000524417 XIRP1Q702N8 1843 aaKnown RBP13.69□□□□□ -0.22
MKNK1-216ENST00000524417 ZNF772Q68DY9 489 aaPredicted RBP13.68□□□□□ -0.22
MKNK1-216ENST00000524417 ZC3H13Q5T200 1668 aaKnown RBP13.68□□□□□ -0.22
MKNK1-216ENST00000524417 EID1Q9Y6B2 187 aa13.67□□□□□ -0.22
MKNK1-216ENST00000524417 PHLPP1O60346 1717 aa13.67□□□□□ -0.22
MKNK1-216ENST00000524417 LRRC9Q6ZRR7 1453 aa13.67□□□□□ -0.22
MKNK1-216ENST00000524417 SCAF11Q99590 1463 aaKnown RBP13.67□□□□□ -0.22
MKNK1-216ENST00000524417 RTEL1-TNFRSF6BF6WH68 1400 aa13.66□□□□□ -0.22
MKNK1-216ENST00000524417 JCADQ9P266 1359 aa13.66□□□□□ -0.22
MKNK1-216ENST00000524417 TXNDC2Q86VQ3 553 aa13.65□□□□□ -0.22
MKNK1-216ENST00000524417 FOXD1Q16676 465 aa13.64□□□□□ -0.23
MKNK1-216ENST00000524417 CFAP65Q6ZU64 1925 aaKnown RBP13.64□□□□□ -0.23
MKNK1-216ENST00000524417 FYCO1Q9BQS8 1478 aa13.63□□□□□ -0.23
MKNK1-216ENST00000524417 RXRBP28702 533 aa13.63□□□□□ -0.23
MKNK1-216ENST00000524417 PROSER2Q86WR7 435 aaPredicted RBP13.63□□□□□ -0.23
MKNK1-216ENST00000524417 TMEM94Q12767 1356 aa13.62□□□□□ -0.23
MKNK1-216ENST00000524417 MTUS2Q5JR59 1369 aa13.62□□□□□ -0.23
MKNK1-216ENST00000524417 UBR1Q8IWV7 1749 aa13.61□□□□□ -0.23
MKNK1-216ENST00000524417 MSH6P52701 1360 aa13.6□□□□□ -0.23
MKNK1-216ENST00000524417 TRIM26Q12899 539 aaPredicted RBP13.6□□□□□ -0.23
MKNK1-216ENST00000524417 STAG3Q9UJ98 1225 aa13.6□□□□□ -0.23
MKNK1-216ENST00000524417 SPATA31A6Q5VVP1 1343 aa13.6□□□□□ -0.23
MKNK1-216ENST00000524417 ZNF644Q9H582 1327 aaPredicted RBP13.6□□□□□ -0.23
MKNK1-216ENST00000524417 ERVK-7P63135 1459 aa13.58□□□□□ -0.24
MKNK1-216ENST00000524417 CCDC141Q6ZP82 1450 aa13.57□□□□□ -0.24
MKNK1-216ENST00000524417 LTKP29376 864 aa13.57□□□□□ -0.24
MKNK1-216ENST00000524417 SLAIN2Q9P270 581 aa13.57□□□□□ -0.24
MKNK1-216ENST00000524417 MBD5Q9P267 1494 aa13.56□□□□□ -0.24
MKNK1-216ENST00000524417 TSPY4P0CV99 314 aa13.56□□□□□ -0.24
MKNK1-216ENST00000524417 TSPY10P0CW01 314 aa13.56□□□□□ -0.24
MKNK1-216ENST00000524417 KCNA6P17658 529 aa13.56□□□□□ -0.24
MKNK1-216ENST00000524417 HRCP23327 699 aa13.56□□□□□ -0.24
MKNK1-216ENST00000524417 RSPH4AQ5TD94 716 aa13.56□□□□□ -0.24
MKNK1-216ENST00000524417 RBM33Q96EV2 1170 aaKnown RBP13.56□□□□□ -0.24
MKNK1-216ENST00000524417 BCANQ96GW7 911 aa13.56□□□□□ -0.24
MKNK1-216ENST00000524417 PCGF6Q9BYE7 350 aa13.56□□□□□ -0.24
MKNK1-216ENST00000524417 SLIT1O75093 1534 aa13.55□□□□□ -0.24
MKNK1-216ENST00000524417 NUTM2BA6NNL0 878 aaPredicted RBP13.54□□□□□ -0.24
MKNK1-216ENST00000524417 NUTM2EB1AL46 878 aaPredicted RBP13.54□□□□□ -0.24
MKNK1-216ENST00000524417 NUTM2DQ5VT03 806 aaPredicted RBP13.54□□□□□ -0.24
MKNK1-216ENST00000524417 NUTM2AQ8IVF1 878 aaPredicted RBP13.54□□□□□ -0.24
MKNK1-216ENST00000524417 ZRANB1Q9UGI0 708 aa13.54□□□□□ -0.24
MKNK1-216ENST00000524417 SRCAPQ6ZRS2 3230 aa13.54□□□□□ -0.24
MKNK1-216ENST00000524417 CDK12Q9NYV4 1490 aaPredicted RBP13.54□□□□□ -0.24
MKNK1-216ENST00000524417 ABCC3O15438 1527 aa13.54□□□□□ -0.24
MKNK1-216ENST00000524417 TIAM1Q13009 1591 aa13.54□□□□□ -0.24
MKNK1-216ENST00000524417 FGD6Q6ZV73 1430 aa13.53□□□□□ -0.24
MKNK1-216ENST00000524417 ARHGAP23Q9P227 1491 aa13.53□□□□□ -0.24
MKNK1-216ENST00000524417 C14orf37Q86TY3 774 aa13.52□□□□□ -0.25
MKNK1-216ENST00000524417 PRDM15P57071 1507 aaPredicted RBP13.52□□□□□ -0.25
MKNK1-216ENST00000524417 MAP3K1Q13233 1512 aa13.52□□□□□ -0.25
MKNK1-216ENST00000524417 LRP6O75581 1613 aa13.52□□□□□ -0.25
MKNK1-216ENST00000524417 CEP152O94986 1710 aa13.52□□□□□ -0.25
MKNK1-216ENST00000524417 COL16A1Q07092 1604 aaPredicted RBP13.51□□□□□ -0.25
MKNK1-216ENST00000524417 NCOA2Q15596 1464 aa13.51□□□□□ -0.25
MKNK1-216ENST00000524417 SLC26A8Q96RN1 970 aa13.51□□□□□ -0.25
MKNK1-216ENST00000524417 NKTRP30414 1462 aaKnown RBP13.5□□□□□ -0.25
MKNK1-216ENST00000524417 SHPRHQ149N8 1683 aa13.49□□□□□ -0.25
MKNK1-216ENST00000524417 CAMSAP2Q08AD1 1489 aa13.48□□□□□ -0.25
MKNK1-216ENST00000524417 TMEM2Q9UHN6 1383 aa13.48□□□□□ -0.25
MKNK1-216ENST00000524417 AFF2P51816 1311 aa13.48□□□□□ -0.25
MKNK1-216ENST00000524417 EHBP1L1Q8N3D4 1523 aa13.48□□□□□ -0.25
MKNK1-216ENST00000524417 PIK3C2BO00750 1634 aa13.47□□□□□ -0.25
MKNK1-216ENST00000524417 EIF2AK4Q9P2K8 1649 aaKnown RBP13.47□□□□□ -0.25
MKNK1-216ENST00000524417 KDM5AP29375 1690 aaKnown RBP13.45□□□□□ -0.26
MKNK1-216ENST00000524417 RBM6P78332 1123 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms