RNA–Protein interactions for RNA: ENST00000524283.5

LINC01608-202, Transcript of long intergenic non-protein coding RNA 1608, humanhuman

TSL 4 BASIC

Gene LINC01608, Length 561 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01608-202ENST00000524283 RNF39Q9H2S5 420 aa11.23□□□□□ -0.61
LINC01608-202ENST00000524283 ATF5Q9Y2D1 282 aaPredicted RBP11.23□□□□□ -0.61
LINC01608-202ENST00000524283 POGZQ7Z3K3 1410 aa11.23□□□□□ -0.61
LINC01608-202ENST00000524283 ERBINQ96RT1 1412 aa11.23□□□□□ -0.61
LINC01608-202ENST00000524283 DUOX2Q9NRD8 1548 aa11.23□□□□□ -0.61
LINC01608-202ENST00000524283 DHX57Q6P158 1386 aaKnown RBP11.22□□□□□ -0.61
LINC01608-202ENST00000524283 ARHGEF12Q9NZN5 1544 aa11.22□□□□□ -0.61
LINC01608-202ENST00000524283 PLXNC1O60486 1568 aa11.21□□□□□ -0.61
LINC01608-202ENST00000524283 MLH3Q9UHC1 1453 aa11.21□□□□□ -0.61
LINC01608-202ENST00000524283 ILDR1Q86SU0 546 aaPredicted RBP11.2□□□□□ -0.62
LINC01608-202ENST00000524283 ATP7AQ04656 1500 aa11.19□□□□□ -0.62
LINC01608-202ENST00000524283 MAGI2Q86UL8 1455 aa11.19□□□□□ -0.62
LINC01608-202ENST00000524283 KANK1Q14678 1352 aa11.19□□□□□ -0.62
LINC01608-202ENST00000524283 MPHOSPH9Q99550 1183 aa11.19□□□□□ -0.62
LINC01608-202ENST00000524283 TIMELESSQ9UNS1 1208 aa11.19□□□□□ -0.62
LINC01608-202ENST00000524283 NUP155O75694 1391 aa11.18□□□□□ -0.62
LINC01608-202ENST00000524283 DHX29Q7Z478 1369 aaKnown RBP11.18□□□□□ -0.62
LINC01608-202ENST00000524283 RAPGEF3O95398 923 aa11.18□□□□□ -0.62
LINC01608-202ENST00000524283 ZFYVE16Q7Z3T8 1539 aa11.18□□□□□ -0.62
LINC01608-202ENST00000524283 KDM5CP41229 1560 aa11.16□□□□□ -0.62
LINC01608-202ENST00000524283 HECW2Q9P2P5 1572 aa11.16□□□□□ -0.62
LINC01608-202ENST00000524283 INO80Q9ULG1 1556 aaPredicted RBP11.16□□□□□ -0.62
LINC01608-202ENST00000524283 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.15□□□□□ -0.62
LINC01608-202ENST00000524283 A2MP01023 1474 aa11.14□□□□□ -0.63
LINC01608-202ENST00000524283 KIF3BO15066 747 aa11.14□□□□□ -0.63
LINC01608-202ENST00000524283 ZMYM4Q5VZL5 1548 aa11.12□□□□□ -0.63
LINC01608-202ENST00000524283 KDM5DQ9BY66 1539 aa11.11□□□□□ -0.63
LINC01608-202ENST00000524283 EIF2AK4Q9P2K8 1649 aaKnown RBP11.11□□□□□ -0.63
LINC01608-202ENST00000524283 PKD2Q13563 968 aa11.11□□□□□ -0.63
LINC01608-202ENST00000524283 KIF13AQ9H1H9 1805 aa11.11□□□□□ -0.63
LINC01608-202ENST00000524283 ATP10AO60312 1499 aa11.11□□□□□ -0.63
LINC01608-202ENST00000524283 NEUROD1Q13562 356 aa11.1□□□□□ -0.63
LINC01608-202ENST00000524283 TONSLQ96HA7 1378 aa11.1□□□□□ -0.63
LINC01608-202ENST00000524283 ESF1Q9H501 851 aaKnown RBP11.09□□□□□ -0.63
LINC01608-202ENST00000524283 KDM6BO15054 1643 aa11.09□□□□□ -0.63
LINC01608-202ENST00000524283 TSPOAP1O95153 1857 aa11.08□□□□□ -0.64
LINC01608-202ENST00000524283 KIDINS220Q9ULH0 1771 aa11.08□□□□□ -0.64
LINC01608-202ENST00000524283 UNC13BO14795 1591 aa11.08□□□□□ -0.64
LINC01608-202ENST00000524283 RICTORQ6R327 1708 aa11.08□□□□□ -0.64
LINC01608-202ENST00000524283 FAM135AQ9P2D6 1515 aa11.08□□□□□ -0.64
LINC01608-202ENST00000524283 WASHC2CQ9Y4E1 1318 aa11.08□□□□□ -0.64
LINC01608-202ENST00000524283 PPRC1Q5VV67 1664 aaKnown RBP11.08□□□□□ -0.64
LINC01608-202ENST00000524283 GGT6Q6P531 493 aa11.07□□□□□ -0.64
LINC01608-202ENST00000524283 PZPP20742 1482 aa11.06□□□□□ -0.64
LINC01608-202ENST00000524283 REREQ9P2R6 1566 aa11.05□□□□□ -0.64
LINC01608-202ENST00000524283 DIP2CQ9Y2E4 1556 aa11.05□□□□□ -0.64
LINC01608-202ENST00000524283 IQGAP3Q86VI3 1631 aa11.05□□□□□ -0.64
LINC01608-202ENST00000524283 ANKRD30BQ9BXX2 1392 aa11.04□□□□□ -0.64
LINC01608-202ENST00000524283 FRMPD1Q5SYB0 1578 aa11.04□□□□□ -0.64
LINC01608-202ENST00000524283 YEATS2Q9ULM3 1422 aa11.04□□□□□ -0.64
LINC01608-202ENST00000524283 SAMD1Q6SPF0 538 aaPredicted RBP11.04□□□□□ -0.64
LINC01608-202ENST00000524283 SIN3AQ96ST3 1273 aa11.04□□□□□ -0.64
LINC01608-202ENST00000524283 ARID4BQ4LE39 1312 aaPredicted RBP11.04□□□□□ -0.64
LINC01608-202ENST00000524283 PRDM15P57071 1507 aaPredicted RBP11.04□□□□□ -0.64
LINC01608-202ENST00000524283 CCDC144AA2RUR9 1427 aa11.03□□□□□ -0.64
LINC01608-202ENST00000524283 ABCA6Q8N139 1617 aa11.03□□□□□ -0.64
LINC01608-202ENST00000524283 AGLP35573 1532 aa11.03□□□□□ -0.64
LINC01608-202ENST00000524283 DEPDC5O75140 1603 aa11.02□□□□□ -0.64
LINC01608-202ENST00000524283 RPRD2Q5VT52 1461 aaKnown RBP11.01□□□□□ -0.65
LINC01608-202ENST00000524283 COL17A1Q9UMD9 1497 aaPredicted RBP11.01□□□□□ -0.65
LINC01608-202ENST00000524283 C1QBPQ07021 282 aaKnown RBP11.01□□□□□ -0.65
LINC01608-202ENST00000524283 STAC3Q96MF2 364 aa11.01□□□□□ -0.65
LINC01608-202ENST00000524283 RNF17Q9BXT8 1623 aaKnown RBP11.01□□□□□ -0.65
LINC01608-202ENST00000524283 BCORL1Q5H9F3 1711 aa11.01□□□□□ -0.65
LINC01608-202ENST00000524283 LMTK2Q8IWU2 1503 aa11□□□□□ -0.65
LINC01608-202ENST00000524283 ARHGEF40Q8TER5 1519 aa11□□□□□ -0.65
LINC01608-202ENST00000524283 U3KPZ7 1027 aaPredicted RBP10.99□□□□□ -0.65
LINC01608-202ENST00000524283 VWDEQ8N2E2 1590 aa10.99□□□□□ -0.65
LINC01608-202ENST00000524283 PPP1R15AO75807 674 aaPredicted RBP10.98□□□□□ -0.65
LINC01608-202ENST00000524283 TET3O43151 1660 aa10.98□□□□□ -0.65
LINC01608-202ENST00000524283 ZC3H13Q5T200 1668 aaKnown RBP10.97□□□□□ -0.65
LINC01608-202ENST00000524283 ARHGAP31Q2M1Z3 1444 aa10.96□□□□□ -0.65
LINC01608-202ENST00000524283 CNTLNQ9NXG0 1405 aa10.96□□□□□ -0.65
LINC01608-202ENST00000524283 SLC52A1Q9NWF4 448 aa10.96□□□□□ -0.65
LINC01608-202ENST00000524283 EFCAB6Q5THR3 1501 aa10.95□□□□□ -0.66
LINC01608-202ENST00000524283 PTPRTO14522 1441 aa10.95□□□□□ -0.66
LINC01608-202ENST00000524283 MLECQ14165 292 aa10.95□□□□□ -0.66
LINC01608-202ENST00000524283 L3MBTL2Q969R5 705 aa10.95□□□□□ -0.66
LINC01608-202ENST00000524283 ABCC3O15438 1527 aa10.94□□□□□ -0.66
LINC01608-202ENST00000524283 MROH1Q8NDA8 1641 aa10.94□□□□□ -0.66
LINC01608-202ENST00000524283 TRPM2O94759 1503 aa10.93□□□□□ -0.66
LINC01608-202ENST00000524283 NPATQ14207 1427 aa10.92□□□□□ -0.66
LINC01608-202ENST00000524283 RGL3Q3MIN7 710 aa10.91□□□□□ -0.66
LINC01608-202ENST00000524283 DCAF11Q8TEB1 546 aa10.91□□□□□ -0.66
LINC01608-202ENST00000524283 RPGRIP1LQ68CZ1 1315 aa10.9□□□□□ -0.66
LINC01608-202ENST00000524283 E9PCH4 1651 aa10.9□□□□□ -0.66
LINC01608-202ENST00000524283 HDGFP51858 240 aaKnown RBP10.9□□□□□ -0.66
LINC01608-202ENST00000524283 ZNF219Q9P2Y4 722 aaPredicted RBP10.9□□□□□ -0.66
LINC01608-202ENST00000524283 STAG3Q9UJ98 1225 aa10.9□□□□□ -0.66
LINC01608-202ENST00000524283 PLA2R1Q13018 1463 aa10.89□□□□□ -0.67
LINC01608-202ENST00000524283 CAMSAP1Q5T5Y3 1602 aa10.89□□□□□ -0.67
LINC01608-202ENST00000524283 ZNF316A6NFI3 1004 aaPredicted RBP10.89□□□□□ -0.67
LINC01608-202ENST00000524283 CHGAP10645 457 aaKnown RBP10.89□□□□□ -0.67
LINC01608-202ENST00000524283 PLCB2Q00722 1185 aa10.89□□□□□ -0.67
LINC01608-202ENST00000524283 ZNF326Q5BKZ1 582 aaKnown RBP10.89□□□□□ -0.67
LINC01608-202ENST00000524283 FBXO3Q9UK99 471 aa10.89□□□□□ -0.67
LINC01608-202ENST00000524283 ZMYM3Q14202 1370 aa10.89□□□□□ -0.67
LINC01608-202ENST00000524283 NOS1P29475 1434 aa10.88□□□□□ -0.67
LINC01608-202ENST00000524283 NEURL4Q96JN8 1562 aa10.88□□□□□ -0.67
LINC01608-202ENST00000524283 SPHKAPQ2M3C7 1700 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms