RNA–Protein interactions for RNA: ENST00000524213.5

CSGALNACT1-216, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-216ENST00000524213 DUOX2Q9NRD8 1548 aa25.42■■□□□ 1.66
CSGALNACT1-216ENST00000524213 UHRF1BP1Q6BDS2 1440 aa25.39■■□□□ 1.66
CSGALNACT1-216ENST00000524213 KDM5DQ9BY66 1539 aa25.39■■□□□ 1.66
CSGALNACT1-216ENST00000524213 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.39■■□□□ 1.65
CSGALNACT1-216ENST00000524213 FAM135AQ9P2D6 1515 aa25.38■■□□□ 1.65
CSGALNACT1-216ENST00000524213 KIF15Q9NS87 1388 aa25.38■■□□□ 1.65
CSGALNACT1-216ENST00000524213 NPATQ14207 1427 aa25.37■■□□□ 1.65
CSGALNACT1-216ENST00000524213 MROH1Q8NDA8 1641 aa25.36■■□□□ 1.65
CSGALNACT1-216ENST00000524213 RRP7BPQ9NSQ0 103 aa25.35■■□□□ 1.65
CSGALNACT1-216ENST00000524213 CHIC2Q9UKJ5 165 aa25.35■■□□□ 1.65
CSGALNACT1-216ENST00000524213 PTPRKQ15262 1439 aa25.35■■□□□ 1.65
CSGALNACT1-216ENST00000524213 ANKRD30AQ9BXX3 1397 aa25.33■■□□□ 1.65
CSGALNACT1-216ENST00000524213 RRBP1Q9P2E9 1410 aaKnown RBP25.33■■□□□ 1.65
CSGALNACT1-216ENST00000524213 ZC3H13Q5T200 1668 aaKnown RBP25.32■■□□□ 1.64
CSGALNACT1-216ENST00000524213 CEP152O94986 1710 aa25.32■■□□□ 1.64
CSGALNACT1-216ENST00000524213 MYO3AQ8NEV4 1616 aa25.32■■□□□ 1.64
CSGALNACT1-216ENST00000524213 WASHC2CQ9Y4E1 1318 aa25.32■■□□□ 1.64
CSGALNACT1-216ENST00000524213 ERBINQ96RT1 1412 aa25.31■■□□□ 1.64
CSGALNACT1-216ENST00000524213 ADGRL2O95490 1459 aa25.31■■□□□ 1.64
CSGALNACT1-216ENST00000524213 NCOA1Q15788 1441 aa25.29■■□□□ 1.64
CSGALNACT1-216ENST00000524213 STRCQ7RTU9 1775 aa25.29■■□□□ 1.64
CSGALNACT1-216ENST00000524213 ABCC3O15438 1527 aa25.29■■□□□ 1.64
CSGALNACT1-216ENST00000524213 ZNF142P52746 1687 aaPredicted RBP25.29■■□□□ 1.64
CSGALNACT1-216ENST00000524213 PZPP20742 1482 aa25.28■■□□□ 1.64
CSGALNACT1-216ENST00000524213 DEPDC5O75140 1603 aa25.27■■□□□ 1.64
CSGALNACT1-216ENST00000524213 PRDM15P57071 1507 aaPredicted RBP25.26■■□□□ 1.63
CSGALNACT1-216ENST00000524213 CAMSAP1Q5T5Y3 1602 aa25.25■■□□□ 1.63
CSGALNACT1-216ENST00000524213 CEP170BQ9Y4F5 1589 aaPredicted RBP25.23■■□□□ 1.63
CSGALNACT1-216ENST00000524213 CFAP65Q6ZU64 1925 aaKnown RBP25.23■■□□□ 1.63
CSGALNACT1-216ENST00000524213 FBXO31Q5XUX0 539 aaPredicted RBP25.22■■□□□ 1.63
CSGALNACT1-216ENST00000524213 ROCK1Q13464 1354 aa25.21■■□□□ 1.63
CSGALNACT1-216ENST00000524213 ITGAEP38570 1179 aa25.21■■□□□ 1.63
CSGALNACT1-216ENST00000524213 TNRQ92752 1358 aa25.18■■□□□ 1.62
CSGALNACT1-216ENST00000524213 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.17■■□□□ 1.62
CSGALNACT1-216ENST00000524213 A2ML1A8K2U0 1454 aa25.15■■□□□ 1.62
CSGALNACT1-216ENST00000524213 ANKRD50Q9ULJ7 1429 aa25.15■■□□□ 1.62
CSGALNACT1-216ENST00000524213 SPATA31D1Q6ZQQ2 1576 aa25.14■■□□□ 1.62
CSGALNACT1-216ENST00000524213 VWDEQ8N2E2 1590 aa25.14■■□□□ 1.62
CSGALNACT1-216ENST00000524213 ERVK-7P63135 1459 aa25.13■■□□□ 1.61
CSGALNACT1-216ENST00000524213 KANK1Q14678 1352 aa25.12■■□□□ 1.61
CSGALNACT1-216ENST00000524213 LMTK2Q8IWU2 1503 aa25.09■■□□□ 1.61
CSGALNACT1-216ENST00000524213 ARHGAP31Q2M1Z3 1444 aa25.09■■□□□ 1.61
CSGALNACT1-216ENST00000524213 NLRP1Q9C000 1473 aa25.09■■□□□ 1.61
CSGALNACT1-216ENST00000524213 UNC13BO14795 1591 aa25.08■■□□□ 1.61
CSGALNACT1-216ENST00000524213 PLA2R1Q13018 1463 aa25.08■■□□□ 1.6
CSGALNACT1-216ENST00000524213 DMRT2Q9Y5R5 561 aa25.07■■□□□ 1.6
CSGALNACT1-216ENST00000524213 PTPRTO14522 1441 aa25.05■■□□□ 1.6
CSGALNACT1-216ENST00000524213 POLR1AO95602 1720 aaPredicted RBP25.05■■□□□ 1.6
CSGALNACT1-216ENST00000524213 EFCAB6Q5THR3 1501 aa25.04■■□□□ 1.6
CSGALNACT1-216ENST00000524213 UGGT1Q9NYU2 1555 aa25.04■■□□□ 1.6
CSGALNACT1-216ENST00000524213 NCKAP5LQ9HCH0 1330 aa25.04■■□□□ 1.6
CSGALNACT1-216ENST00000524213 TET3O43151 1660 aa25.01■■□□□ 1.59
CSGALNACT1-216ENST00000524213 GCC2Q8IWJ2 1684 aa25.01■■□□□ 1.59
CSGALNACT1-216ENST00000524213 UBR1Q8IWV7 1749 aa25■■□□□ 1.59
CSGALNACT1-216ENST00000524213 PKD2Q13563 968 aa24.98■■□□□ 1.59
CSGALNACT1-216ENST00000524213 IQGAP3Q86VI3 1631 aa24.97■■□□□ 1.59
CSGALNACT1-216ENST00000524213 SYNMO15061 1565 aa24.97■■□□□ 1.59
CSGALNACT1-216ENST00000524213 PIK3C2BO00750 1634 aa24.96■■□□□ 1.59
CSGALNACT1-216ENST00000524213 NEURL4Q96JN8 1562 aa24.96■■□□□ 1.59
CSGALNACT1-216ENST00000524213 HFM1A2PYH4 1435 aa24.95■■□□□ 1.59
CSGALNACT1-216ENST00000524213 NAIPQ13075 1403 aa24.95■■□□□ 1.59
CSGALNACT1-216ENST00000524213 THEMISQ8N1K5 641 aaPredicted RBP24.95■■□□□ 1.58
CSGALNACT1-216ENST00000524213 ILDR1Q86SU0 546 aaPredicted RBP24.94■■□□□ 1.58
CSGALNACT1-216ENST00000524213 E9PCH4 1651 aa24.94■■□□□ 1.58
CSGALNACT1-216ENST00000524213 RPRD2Q5VT52 1461 aaKnown RBP24.92■■□□□ 1.58
CSGALNACT1-216ENST00000524213 NOS1P29475 1434 aa24.92■■□□□ 1.58
CSGALNACT1-216ENST00000524213 LTBP4Q8N2S1 1624 aa24.89■■□□□ 1.57
CSGALNACT1-216ENST00000524213 KDM5AP29375 1690 aaKnown RBP24.88■■□□□ 1.57
CSGALNACT1-216ENST00000524213 ANKLE2Q86XL3 938 aa24.88■■□□□ 1.57
CSGALNACT1-216ENST00000524213 CERKQ8TCT0 537 aa24.88■■□□□ 1.57
CSGALNACT1-216ENST00000524213 NUP155O75694 1391 aa24.88■■□□□ 1.57
CSGALNACT1-216ENST00000524213 IQGAP1P46940 1657 aa24.85■■□□□ 1.57
CSGALNACT1-216ENST00000524213 MYO5BQ9ULV0 1848 aa24.84■■□□□ 1.57
CSGALNACT1-216ENST00000524213 IDI1Q13907 227 aa24.84■■□□□ 1.57
CSGALNACT1-216ENST00000524213 ACIN1Q9UKV3 1341 aaKnown RBP24.84■■□□□ 1.57
CSGALNACT1-216ENST00000524213 MED14O60244 1454 aa24.83■■□□□ 1.57
CSGALNACT1-216ENST00000524213 SLIT1O75093 1534 aa24.83■■□□□ 1.57
CSGALNACT1-216ENST00000524213 FBXO41Q8TF61 875 aa24.83■■□□□ 1.57
CSGALNACT1-216ENST00000524213 ARHGAP23Q9P227 1491 aa24.83■■□□□ 1.56
CSGALNACT1-216ENST00000524213 ADGRB3O60242 1522 aa24.82■■□□□ 1.56
CSGALNACT1-216ENST00000524213 NPHP4O75161 1426 aaPredicted RBP24.82■■□□□ 1.56
CSGALNACT1-216ENST00000524213 ZNF335Q9H4Z2 1342 aaPredicted RBP24.82■■□□□ 1.56
CSGALNACT1-216ENST00000524213 SCAF11Q99590 1463 aaKnown RBP24.79■■□□□ 1.56
CSGALNACT1-216ENST00000524213 TRIM52Q96A61 297 aa24.79■■□□□ 1.56
CSGALNACT1-216ENST00000524213 STAG3Q9UJ98 1225 aa24.79■■□□□ 1.56
CSGALNACT1-216ENST00000524213 SLC52A1Q9NWF4 448 aa24.78■■□□□ 1.56
CSGALNACT1-216ENST00000524213 SPHKAPQ2M3C7 1700 aa24.78■■□□□ 1.56
CSGALNACT1-216ENST00000524213 SETD5Q9C0A6 1442 aa24.78■■□□□ 1.56
CSGALNACT1-216ENST00000524213 LTKP29376 864 aa24.76■■□□□ 1.55
CSGALNACT1-216ENST00000524213 TMEM2Q9UHN6 1383 aa24.76■■□□□ 1.55
CSGALNACT1-216ENST00000524213 TMEM131LA2VDJ0 1609 aa24.75■■□□□ 1.55
CSGALNACT1-216ENST00000524213 TXNDC2Q86VQ3 553 aa24.74■■□□□ 1.55
CSGALNACT1-216ENST00000524213 EID1Q9Y6B2 187 aa24.71■■□□□ 1.55
CSGALNACT1-216ENST00000524213 STRCP1A6NGW2 1772 aa24.7■■□□□ 1.55
CSGALNACT1-216ENST00000524213 IQSEC2Q5JU85 1478 aa24.7■■□□□ 1.54
CSGALNACT1-216ENST00000524213 SLC4A1APQ9BWU0 796 aaKnown RBP24.67■■□□□ 1.54
CSGALNACT1-216ENST00000524213 HRCP23327 699 aa24.66■■□□□ 1.54
CSGALNACT1-216ENST00000524213 RAB3GAP2Q9H2M9 1393 aa24.66■■□□□ 1.54
CSGALNACT1-216ENST00000524213 CPS1P31327 1500 aa24.66■■□□□ 1.54
CSGALNACT1-216ENST00000524213 CHGAP10645 457 aaKnown RBP24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms