RNA–Protein interactions for RNA: ENST00000524095.5

CLVS1-211, Transcript of clavesin 1, humanhuman

TSL 3

Gene CLVS1, Length 709 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLVS1-211ENST00000524095 KIF3BO15066 747 aa12.07□□□□□ -0.48
CLVS1-211ENST00000524095 DHX29Q7Z478 1369 aaKnown RBP12.06□□□□□ -0.48
CLVS1-211ENST00000524095 TNRQ92752 1358 aa12.06□□□□□ -0.48
CLVS1-211ENST00000524095 CPS1P31327 1500 aa12.06□□□□□ -0.48
CLVS1-211ENST00000524095 MROH2AA6NES4 1674 aa12.05□□□□□ -0.48
CLVS1-211ENST00000524095 WASHC2CQ9Y4E1 1318 aa12.05□□□□□ -0.48
CLVS1-211ENST00000524095 PREX2Q70Z35 1606 aa12.04□□□□□ -0.48
CLVS1-211ENST00000524095 ALKQ9UM73 1620 aa12.04□□□□□ -0.48
CLVS1-211ENST00000524095 MIA2Q96PC5 1412 aa12.04□□□□□ -0.48
CLVS1-211ENST00000524095 ITSN2Q9NZM3 1697 aa12.04□□□□□ -0.48
CLVS1-211ENST00000524095 POTEAQ6S8J7 498 aa12.04□□□□□ -0.48
CLVS1-211ENST00000524095 SYCP2Q9BX26 1530 aa12.04□□□□□ -0.48
CLVS1-211ENST00000524095 DNMT1P26358 1616 aaKnown RBP12.04□□□□□ -0.48
CLVS1-211ENST00000524095 CCDC18Q5T9S5 1454 aa12.03□□□□□ -0.48
CLVS1-211ENST00000524095 CLTCQ00610 1675 aaKnown RBP12.03□□□□□ -0.48
CLVS1-211ENST00000524095 CCNB3Q8WWL7 1395 aa12.03□□□□□ -0.48
CLVS1-211ENST00000524095 ATP7AQ04656 1500 aa12.02□□□□□ -0.48
CLVS1-211ENST00000524095 PLXNC1O60486 1568 aa12.02□□□□□ -0.49
CLVS1-211ENST00000524095 MYO3AQ8NEV4 1616 aa12.02□□□□□ -0.49
CLVS1-211ENST00000524095 SUPT6HQ7KZ85 1726 aaKnown RBP12.02□□□□□ -0.49
CLVS1-211ENST00000524095 LRRIQ1Q96JM4 1722 aa12.02□□□□□ -0.49
CLVS1-211ENST00000524095 NPHP4O75161 1426 aaPredicted RBP12.02□□□□□ -0.49
CLVS1-211ENST00000524095 MBD5Q9P267 1494 aa12.02□□□□□ -0.49
CLVS1-211ENST00000524095 PLEKHH2Q8IVE3 1493 aa12.01□□□□□ -0.49
CLVS1-211ENST00000524095 VWDEQ8N2E2 1590 aa12.01□□□□□ -0.49
CLVS1-211ENST00000524095 NEURL4Q96JN8 1562 aa12.01□□□□□ -0.49
CLVS1-211ENST00000524095 RTEL1-TNFRSF6BF6WH68 1400 aa12□□□□□ -0.49
CLVS1-211ENST00000524095 MED14O60244 1454 aa12□□□□□ -0.49
CLVS1-211ENST00000524095 ZNF142P52746 1687 aaPredicted RBP12□□□□□ -0.49
CLVS1-211ENST00000524095 LRRC7Q96NW7 1537 aa11.99□□□□□ -0.49
CLVS1-211ENST00000524095 CDC42BPAQ5VT25 1732 aa11.98□□□□□ -0.49
CLVS1-211ENST00000524095 LTKP29376 864 aa11.98□□□□□ -0.49
CLVS1-211ENST00000524095 PZPP20742 1482 aa11.97□□□□□ -0.49
CLVS1-211ENST00000524095 RSPH4AQ5TD94 716 aa11.96□□□□□ -0.49
CLVS1-211ENST00000524095 TXNDC2Q86VQ3 553 aa11.95□□□□□ -0.5
CLVS1-211ENST00000524095 INO80Q9ULG1 1556 aaPredicted RBP11.95□□□□□ -0.5
CLVS1-211ENST00000524095 FAM135AQ9P2D6 1515 aa11.95□□□□□ -0.5
CLVS1-211ENST00000524095 MTUS2Q5JR59 1369 aa11.94□□□□□ -0.5
CLVS1-211ENST00000524095 NLRP1Q9C000 1473 aa11.94□□□□□ -0.5
CLVS1-211ENST00000524095 FYCO1Q9BQS8 1478 aa11.93□□□□□ -0.5
CLVS1-211ENST00000524095 FAM135BQ49AJ0 1406 aa11.93□□□□□ -0.5
CLVS1-211ENST00000524095 UGGT1Q9NYU2 1555 aa11.92□□□□□ -0.5
CLVS1-211ENST00000524095 TSPY4P0CV99 314 aa11.91□□□□□ -0.5
CLVS1-211ENST00000524095 TSPY10P0CW01 314 aa11.91□□□□□ -0.5
CLVS1-211ENST00000524095 POTEHQ6S545 545 aa11.91□□□□□ -0.5
CLVS1-211ENST00000524095 RBM33Q96EV2 1170 aaKnown RBP11.91□□□□□ -0.5
CLVS1-211ENST00000524095 KDM5DQ9BY66 1539 aa11.88□□□□□ -0.51
CLVS1-211ENST00000524095 DEPDC5O75140 1603 aa11.88□□□□□ -0.51
CLVS1-211ENST00000524095 KCNA6P17658 529 aa11.87□□□□□ -0.51
CLVS1-211ENST00000524095 PROSER2Q86WR7 435 aaPredicted RBP11.87□□□□□ -0.51
CLVS1-211ENST00000524095 UPF1Q92900 1129 aaKnown RBP eCLIP11.87□□□□□ -0.51
CLVS1-211ENST00000524095 STRCP1A6NGW2 1772 aa11.87□□□□□ -0.51
CLVS1-211ENST00000524095 EID1Q9Y6B2 187 aa11.86□□□□□ -0.51
CLVS1-211ENST00000524095 NCOA2Q15596 1464 aa11.86□□□□□ -0.51
CLVS1-211ENST00000524095 ADGBQ8N7X0 1667 aa11.86□□□□□ -0.51
CLVS1-211ENST00000524095 TMEM94Q12767 1356 aa11.85□□□□□ -0.51
CLVS1-211ENST00000524095 CEP162Q5TB80 1403 aa11.85□□□□□ -0.51
CLVS1-211ENST00000524095 POLR1AO95602 1720 aaPredicted RBP11.84□□□□□ -0.51
CLVS1-211ENST00000524095 SLC26A8Q96RN1 970 aa11.84□□□□□ -0.51
CLVS1-211ENST00000524095 SLAIN2Q9P270 581 aa11.84□□□□□ -0.51
CLVS1-211ENST00000524095 CCDC141Q6ZP82 1450 aa11.83□□□□□ -0.52
CLVS1-211ENST00000524095 SCAF11Q99590 1463 aaKnown RBP11.83□□□□□ -0.52
CLVS1-211ENST00000524095 IDI1Q13907 227 aa11.83□□□□□ -0.52
CLVS1-211ENST00000524095 TIAM1Q13009 1591 aa11.83□□□□□ -0.52
CLVS1-211ENST00000524095 ERVK-7P63135 1459 aa11.83□□□□□ -0.52
CLVS1-211ENST00000524095 IQGAP1P46940 1657 aa11.82□□□□□ -0.52
CLVS1-211ENST00000524095 ARHGAP23Q9P227 1491 aa11.82□□□□□ -0.52
CLVS1-211ENST00000524095 TMEM2Q9UHN6 1383 aa11.81□□□□□ -0.52
CLVS1-211ENST00000524095 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.81□□□□□ -0.52
CLVS1-211ENST00000524095 ABCC3O15438 1527 aa11.81□□□□□ -0.52
CLVS1-211ENST00000524095 RNF17Q9BXT8 1623 aaKnown RBP11.8□□□□□ -0.52
CLVS1-211ENST00000524095 STAG3Q9UJ98 1225 aa11.79□□□□□ -0.52
CLVS1-211ENST00000524095 CAMSAP2Q08AD1 1489 aa11.78□□□□□ -0.52
CLVS1-211ENST00000524095 SLIT1O75093 1534 aa11.78□□□□□ -0.52
CLVS1-211ENST00000524095 TRIM52Q96A61 297 aa11.78□□□□□ -0.52
CLVS1-211ENST00000524095 SRCAPQ6ZRS2 3230 aa11.78□□□□□ -0.52
CLVS1-211ENST00000524095 JCADQ9P266 1359 aa11.78□□□□□ -0.52
CLVS1-211ENST00000524095 ZC3H13Q5T200 1668 aaKnown RBP11.76□□□□□ -0.53
CLVS1-211ENST00000524095 RRP7BPQ9NSQ0 103 aa11.76□□□□□ -0.53
CLVS1-211ENST00000524095 ARHGAP31Q2M1Z3 1444 aa11.76□□□□□ -0.53
CLVS1-211ENST00000524095 SYNMO15061 1565 aa11.75□□□□□ -0.53
CLVS1-211ENST00000524095 RXRBP28702 533 aa11.75□□□□□ -0.53
CLVS1-211ENST00000524095 ZNF772Q68DY9 489 aaPredicted RBP11.75□□□□□ -0.53
CLVS1-211ENST00000524095 KANK4Q5T7N3 995 aaPredicted RBP11.74□□□□□ -0.53
CLVS1-211ENST00000524095 BCANQ96GW7 911 aa11.74□□□□□ -0.53
CLVS1-211ENST00000524095 EHBP1L1Q8N3D4 1523 aa11.74□□□□□ -0.53
CLVS1-211ENST00000524095 MSH6P52701 1360 aa11.72□□□□□ -0.53
CLVS1-211ENST00000524095 SPATA31A6Q5VVP1 1343 aa11.72□□□□□ -0.53
CLVS1-211ENST00000524095 MEX3CQ5U5Q3 659 aaKnown RBP11.72□□□□□ -0.53
CLVS1-211ENST00000524095 XIRP1Q702N8 1843 aaKnown RBP11.72□□□□□ -0.53
CLVS1-211ENST00000524095 UBR1Q8IWV7 1749 aa11.72□□□□□ -0.53
CLVS1-211ENST00000524095 TET3O43151 1660 aa11.71□□□□□ -0.53
CLVS1-211ENST00000524095 ARHGEF5Q12774 1597 aa11.71□□□□□ -0.53
CLVS1-211ENST00000524095 MAP3K1Q13233 1512 aa11.71□□□□□ -0.53
CLVS1-211ENST00000524095 SLC52A1Q9NWF4 448 aa11.7□□□□□ -0.54
CLVS1-211ENST00000524095 TBX22Q9Y458 520 aa11.7□□□□□ -0.54
CLVS1-211ENST00000524095 MROH1Q8NDA8 1641 aa11.7□□□□□ -0.54
CLVS1-211ENST00000524095 PRDM15P57071 1507 aaPredicted RBP11.7□□□□□ -0.54
CLVS1-211ENST00000524095 ROBO1Q9Y6N7 1651 aa11.69□□□□□ -0.54
CLVS1-211ENST00000524095 LRP6O75581 1613 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms