RNA–Protein interactions for RNA: ENST00000523990.1

FBXO28-205, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-205ENST00000523990 PPP6R1Q9UPN7 881 aa29.75■■■□□ 2.35
FBXO28-205ENST00000523990 NPATQ14207 1427 aa29.74■■■□□ 2.35
FBXO28-205ENST00000523990 HSPA2P54652 639 aa29.73■■■□□ 2.35
FBXO28-205ENST00000523990 ZC3H13Q5T200 1668 aaKnown RBP29.71■■■□□ 2.35
FBXO28-205ENST00000523990 MROH1Q8NDA8 1641 aa29.7■■■□□ 2.35
FBXO28-205ENST00000523990 MYO3AQ8NEV4 1616 aa29.7■■■□□ 2.35
FBXO28-205ENST00000523990 ZNF142P52746 1687 aaPredicted RBP29.68■■■□□ 2.34
FBXO28-205ENST00000523990 KIF15Q9NS87 1388 aa29.68■■■□□ 2.34
FBXO28-205ENST00000523990 PTPRKQ15262 1439 aa29.68■■■□□ 2.34
FBXO28-205ENST00000523990 STRCQ7RTU9 1775 aa29.65■■■□□ 2.34
FBXO28-205ENST00000523990 ERBINQ96RT1 1412 aa29.64■■■□□ 2.34
FBXO28-205ENST00000523990 CEP152O94986 1710 aa29.63■■■□□ 2.33
FBXO28-205ENST00000523990 DEPDC5O75140 1603 aa29.63■■■□□ 2.33
FBXO28-205ENST00000523990 ADGRL2O95490 1459 aa29.62■■■□□ 2.33
FBXO28-205ENST00000523990 ABCC3O15438 1527 aa29.62■■■□□ 2.33
FBXO28-205ENST00000523990 PZPP20742 1482 aa29.61■■■□□ 2.33
FBXO28-205ENST00000523990 PRDM15P57071 1507 aaPredicted RBP29.61■■■□□ 2.33
FBXO28-205ENST00000523990 FAM50AQ14320 339 aaKnown RBP29.59■■■□□ 2.33
FBXO28-205ENST00000523990 CEP170BQ9Y4F5 1589 aaPredicted RBP29.59■■■□□ 2.33
FBXO28-205ENST00000523990 WASHC2CQ9Y4E1 1318 aa29.58■■■□□ 2.33
FBXO28-205ENST00000523990 ANKRD30AQ9BXX3 1397 aa29.58■■■□□ 2.33
FBXO28-205ENST00000523990 CAMSAP1Q5T5Y3 1602 aa29.58■■■□□ 2.33
FBXO28-205ENST00000523990 NCOA1Q15788 1441 aa29.57■■■□□ 2.32
FBXO28-205ENST00000523990 RRP7BPQ9NSQ0 103 aa29.57■■■□□ 2.32
FBXO28-205ENST00000523990 CHIC2Q9UKJ5 165 aa29.54■■■□□ 2.32
FBXO28-205ENST00000523990 PPARGC1BQ86YN6 1023 aaKnown RBP29.53■■■□□ 2.32
FBXO28-205ENST00000523990 SPATA31D1Q6ZQQ2 1576 aa29.47■■■□□ 2.31
FBXO28-205ENST00000523990 TNRQ92752 1358 aa29.47■■■□□ 2.31
FBXO28-205ENST00000523990 A2ML1A8K2U0 1454 aa29.47■■■□□ 2.31
FBXO28-205ENST00000523990 CFAP65Q6ZU64 1925 aaKnown RBP29.46■■■□□ 2.31
FBXO28-205ENST00000523990 FBXO31Q5XUX0 539 aaPredicted RBP29.45■■■□□ 2.31
FBXO28-205ENST00000523990 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.45■■■□□ 2.31
FBXO28-205ENST00000523990 VWDEQ8N2E2 1590 aa29.45■■■□□ 2.31
FBXO28-205ENST00000523990 PLA2R1Q13018 1463 aa29.42■■■□□ 2.3
FBXO28-205ENST00000523990 ERVK-7P63135 1459 aa29.41■■■□□ 2.3
FBXO28-205ENST00000523990 ANKRD50Q9ULJ7 1429 aa29.4■■■□□ 2.3
FBXO28-205ENST00000523990 LMTK2Q8IWU2 1503 aa29.4■■■□□ 2.3
FBXO28-205ENST00000523990 NLRP1Q9C000 1473 aa29.4■■■□□ 2.3
FBXO28-205ENST00000523990 RRBP1Q9P2E9 1410 aaKnown RBP29.39■■■□□ 2.3
FBXO28-205ENST00000523990 PTPRTO14522 1441 aa29.38■■■□□ 2.29
FBXO28-205ENST00000523990 ARHGAP31Q2M1Z3 1444 aa29.38■■■□□ 2.29
FBXO28-205ENST00000523990 ROCK1Q13464 1354 aa29.38■■■□□ 2.29
FBXO28-205ENST00000523990 POLR1AO95602 1720 aaPredicted RBP29.38■■■□□ 2.29
FBXO28-205ENST00000523990 DMRT2Q9Y5R5 561 aa29.37■■■□□ 2.29
FBXO28-205ENST00000523990 KANK1Q14678 1352 aa29.36■■■□□ 2.29
FBXO28-205ENST00000523990 UNC13BO14795 1591 aa29.36■■■□□ 2.29
FBXO28-205ENST00000523990 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.35■■■□□ 2.29
FBXO28-205ENST00000523990 EFCAB6Q5THR3 1501 aa29.34■■■□□ 2.29
FBXO28-205ENST00000523990 UGGT1Q9NYU2 1555 aa29.33■■■□□ 2.29
FBXO28-205ENST00000523990 UBR1Q8IWV7 1749 aa29.3■■■□□ 2.28
FBXO28-205ENST00000523990 TET3O43151 1660 aa29.29■■■□□ 2.28
FBXO28-205ENST00000523990 GCC2Q8IWJ2 1684 aa29.28■■■□□ 2.28
FBXO28-205ENST00000523990 NEURL4Q96JN8 1562 aa29.27■■■□□ 2.28
FBXO28-205ENST00000523990 ITGAEP38570 1179 aa29.27■■■□□ 2.28
FBXO28-205ENST00000523990 NCKAP5LQ9HCH0 1330 aa29.26■■■□□ 2.27
FBXO28-205ENST00000523990 PKD2Q13563 968 aa29.25■■■□□ 2.27
FBXO28-205ENST00000523990 ILDR1Q86SU0 546 aaPredicted RBP29.24■■■□□ 2.27
FBXO28-205ENST00000523990 IQGAP3Q86VI3 1631 aa29.24■■■□□ 2.27
FBXO28-205ENST00000523990 SYNMO15061 1565 aa29.23■■■□□ 2.27
FBXO28-205ENST00000523990 PIK3C2BO00750 1634 aa29.22■■■□□ 2.27
FBXO28-205ENST00000523990 KDM5AP29375 1690 aaKnown RBP29.2■■■□□ 2.26
FBXO28-205ENST00000523990 LTBP4Q8N2S1 1624 aa29.19■■■□□ 2.26
FBXO28-205ENST00000523990 RPRD2Q5VT52 1461 aaKnown RBP29.19■■■□□ 2.26
FBXO28-205ENST00000523990 THEMISQ8N1K5 641 aaPredicted RBP29.18■■■□□ 2.26
FBXO28-205ENST00000523990 NOS1P29475 1434 aa29.17■■■□□ 2.26
FBXO28-205ENST00000523990 E9PCH4 1651 aa29.17■■■□□ 2.26
FBXO28-205ENST00000523990 CERKQ8TCT0 537 aa29.14■■■□□ 2.26
FBXO28-205ENST00000523990 IQGAP1P46940 1657 aa29.14■■■□□ 2.25
FBXO28-205ENST00000523990 MED14O60244 1454 aa29.13■■■□□ 2.25
FBXO28-205ENST00000523990 FBXO41Q8TF61 875 aa29.12■■■□□ 2.25
FBXO28-205ENST00000523990 SLIT1O75093 1534 aa29.11■■■□□ 2.25
FBXO28-205ENST00000523990 ARHGAP23Q9P227 1491 aa29.1■■■□□ 2.25
FBXO28-205ENST00000523990 ANKLE2Q86XL3 938 aa29.09■■■□□ 2.25
FBXO28-205ENST00000523990 ADGRB3O60242 1522 aa29.08■■■□□ 2.25
FBXO28-205ENST00000523990 NAIPQ13075 1403 aa29.08■■■□□ 2.25
FBXO28-205ENST00000523990 MYO5BQ9ULV0 1848 aa29.06■■■□□ 2.24
FBXO28-205ENST00000523990 NPHP4O75161 1426 aaPredicted RBP29.05■■■□□ 2.24
FBXO28-205ENST00000523990 NUP155O75694 1391 aa29.05■■■□□ 2.24
FBXO28-205ENST00000523990 ZNF335Q9H4Z2 1342 aaPredicted RBP29.04■■■□□ 2.24
FBXO28-205ENST00000523990 SCAF11Q99590 1463 aaKnown RBP29.03■■■□□ 2.24
FBXO28-205ENST00000523990 HFM1A2PYH4 1435 aa29.03■■■□□ 2.24
FBXO28-205ENST00000523990 IQSEC2Q5JU85 1478 aa29.02■■■□□ 2.24
FBXO28-205ENST00000523990 IDI1Q13907 227 aa29.02■■■□□ 2.24
FBXO28-205ENST00000523990 SPHKAPQ2M3C7 1700 aa29■■■□□ 2.23
FBXO28-205ENST00000523990 SLC52A1Q9NWF4 448 aa28.98■■■□□ 2.23
FBXO28-205ENST00000523990 TMEM2Q9UHN6 1383 aa28.98■■■□□ 2.23
FBXO28-205ENST00000523990 TMEM131LA2VDJ0 1609 aa28.98■■■□□ 2.23
FBXO28-205ENST00000523990 STAG3Q9UJ98 1225 aa28.94■■■□□ 2.22
FBXO28-205ENST00000523990 STRCP1A6NGW2 1772 aa28.94■■■□□ 2.22
FBXO28-205ENST00000523990 LTKP29376 864 aa28.94■■■□□ 2.22
FBXO28-205ENST00000523990 CPS1P31327 1500 aa28.93■■■□□ 2.22
FBXO28-205ENST00000523990 TXNDC2Q86VQ3 553 aa28.9■■■□□ 2.22
FBXO28-205ENST00000523990 EID1Q9Y6B2 187 aa28.88■■■□□ 2.21
FBXO28-205ENST00000523990 ZFYVE9O95405 1425 aa28.86■■■□□ 2.21
FBXO28-205ENST00000523990 TRPM2O94759 1503 aa28.83■■■□□ 2.21
FBXO28-205ENST00000523990 CLTCL1P53675 1640 aa28.81■■■□□ 2.2
FBXO28-205ENST00000523990 RIMS2Q9UQ26 1411 aa28.8■■■□□ 2.2
FBXO28-205ENST00000523990 KIF1BO60333 1816 aa28.77■■■□□ 2.2
FBXO28-205ENST00000523990 XIRP1Q702N8 1843 aaKnown RBP28.75■■■□□ 2.19
FBXO28-205ENST00000523990 TRIM52Q96A61 297 aa28.75■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms