RNA–Protein interactions for RNA: ENST00000523916.5

CASP3-206, Transcript of caspase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP3, Length 2,540 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-206ENST00000523916 ZNF316A6NFI3 1004 aaPredicted RBP14.25□□□□□ -0.13
CASP3-206ENST00000523916 C14orf37Q86TY3 774 aa14.25□□□□□ -0.13
CASP3-206ENST00000523916 PLEKHH2Q8IVE3 1493 aa14.25□□□□□ -0.13
CASP3-206ENST00000523916 MLH3Q9UHC1 1453 aa14.25□□□□□ -0.13
CASP3-206ENST00000523916 SIGLEC1Q9BZZ2 1709 aa14.25□□□□□ -0.13
CASP3-206ENST00000523916 ATP10AO60312 1499 aa14.24□□□□□ -0.13
CASP3-206ENST00000523916 REREQ9P2R6 1566 aa14.24□□□□□ -0.13
CASP3-206ENST00000523916 KIAA1107Q9UPP5 1409 aa14.24□□□□□ -0.13
CASP3-206ENST00000523916 C9orf84Q5VXU9 1444 aa14.23□□□□□ -0.13
CASP3-206ENST00000523916 TRAPPC8Q9Y2L5 1435 aa14.23□□□□□ -0.13
CASP3-206ENST00000523916 DIP2CQ9Y2E4 1556 aa14.22□□□□□ -0.13
CASP3-206ENST00000523916 LRRC9Q6ZRR7 1453 aa14.22□□□□□ -0.13
CASP3-206ENST00000523916 SYCP2Q9BX26 1530 aa14.21□□□□□ -0.13
CASP3-206ENST00000523916 CCER1Q8TC90 406 aaPredicted RBP14.21□□□□□ -0.13
CASP3-206ENST00000523916 NCOA2Q15596 1464 aa14.21□□□□□ -0.13
CASP3-206ENST00000523916 KIDINS220Q9ULH0 1771 aa14.21□□□□□ -0.13
CASP3-206ENST00000523916 AFAP1Q8N556 730 aa14.21□□□□□ -0.13
CASP3-206ENST00000523916 ABCA6Q8N139 1617 aa14.21□□□□□ -0.14
CASP3-206ENST00000523916 CFDP1Q9UEE9 299 aaPredicted RBP14.2□□□□□ -0.14
CASP3-206ENST00000523916 MADDQ8WXG6 1647 aa14.2□□□□□ -0.14
CASP3-206ENST00000523916 AMER1Q5JTC6 1135 aaPredicted RBP14.2□□□□□ -0.14
CASP3-206ENST00000523916 NBR1Q14596 966 aa14.19□□□□□ -0.14
CASP3-206ENST00000523916 ARID4BQ4LE39 1312 aaPredicted RBP14.18□□□□□ -0.14
CASP3-206ENST00000523916 PTPRMP28827 1452 aa14.18□□□□□ -0.14
CASP3-206ENST00000523916 AGLP35573 1532 aa14.17□□□□□ -0.14
CASP3-206ENST00000523916 INO80Q9ULG1 1556 aaPredicted RBP14.17□□□□□ -0.14
CASP3-206ENST00000523916 CNKSR2Q8WXI2 1034 aa14.17□□□□□ -0.14
CASP3-206ENST00000523916 RIMS1Q86UR5 1692 aaKnown RBP14.16□□□□□ -0.14
CASP3-206ENST00000523916 ZNF777Q9ULD5 760 aaPredicted RBP14.16□□□□□ -0.14
CASP3-206ENST00000523916 FER1L4A9Z1Z3 1794 aa14.16□□□□□ -0.14
CASP3-206ENST00000523916 BCANQ96GW7 911 aa14.16□□□□□ -0.14
CASP3-206ENST00000523916 MBD5Q9P267 1494 aa14.16□□□□□ -0.14
CASP3-206ENST00000523916 CHMP4BQ9H444 224 aaKnown RBP14.15□□□□□ -0.14
CASP3-206ENST00000523916 RTL5Q5HYW3 569 aaPredicted RBP14.15□□□□□ -0.14
CASP3-206ENST00000523916 ATP7AQ04656 1500 aa14.15□□□□□ -0.14
CASP3-206ENST00000523916 TAOK2Q9UL54 1235 aa14.14□□□□□ -0.15
CASP3-206ENST00000523916 HNRNPMP52272 730 aaKnown RBP eCLIP14.14□□□□□ -0.15
CASP3-206ENST00000523916 IPO4Q8TEX9 1081 aaKnown RBP14.13□□□□□ -0.15
CASP3-206ENST00000523916 CAMSAP2Q08AD1 1489 aa14.13□□□□□ -0.15
CASP3-206ENST00000523916 ARHGEF5Q12774 1597 aa14.13□□□□□ -0.15
CASP3-206ENST00000523916 SPAG9O60271 1321 aaKnown RBP14.13□□□□□ -0.15
CASP3-206ENST00000523916 KANK4Q5T7N3 995 aaPredicted RBP14.12□□□□□ -0.15
CASP3-206ENST00000523916 BBXQ8WY36 941 aaPredicted RBP14.12□□□□□ -0.15
CASP3-206ENST00000523916 ADGBQ8N7X0 1667 aa14.12□□□□□ -0.15
CASP3-206ENST00000523916 RTEL1-TNFRSF6BF6WH68 1400 aa14.11□□□□□ -0.15
CASP3-206ENST00000523916 RRP9O43818 475 aaKnown RBP14.11□□□□□ -0.15
CASP3-206ENST00000523916 PLXNC1O60486 1568 aa14.11□□□□□ -0.15
CASP3-206ENST00000523916 ZNF644Q9H582 1327 aaPredicted RBP14.11□□□□□ -0.15
CASP3-206ENST00000523916 MIA2Q96PC5 1412 aa14.11□□□□□ -0.15
CASP3-206ENST00000523916 CCDC141Q6ZP82 1450 aa14.1□□□□□ -0.15
CASP3-206ENST00000523916 MYOM3Q5VTT5 1437 aa14.1□□□□□ -0.15
CASP3-206ENST00000523916 GTF2E1P29083 439 aaPredicted RBP14.08□□□□□ -0.15
CASP3-206ENST00000523916 NOP58Q9Y2X3 529 aaKnown RBP14.08□□□□□ -0.15
CASP3-206ENST00000523916 HSP90AA2PQ14568 343 aaPredicted RBP14.07□□□□□ -0.16
CASP3-206ENST00000523916 WASHC2CQ9Y4E1 1318 aa14.07□□□□□ -0.16
CASP3-206ENST00000523916 A2MP01023 1474 aa14.07□□□□□ -0.16
CASP3-206ENST00000523916 BCCIPQ9P287 314 aaKnown RBP eCLIP14.06□□□□□ -0.16
CASP3-206ENST00000523916 MAST1Q9Y2H9 1570 aa14.06□□□□□ -0.16
CASP3-206ENST00000523916 FBXO3Q9UK99 471 aa14.06□□□□□ -0.16
CASP3-206ENST00000523916 MLECQ14165 292 aa14.05□□□□□ -0.16
CASP3-206ENST00000523916 ZFP91Q96JP5 570 aaPredicted RBP14.05□□□□□ -0.16
CASP3-206ENST00000523916 MROH2AA6NES4 1674 aa14.04□□□□□ -0.16
CASP3-206ENST00000523916 PRDM4Q9UKN5 801 aa14.04□□□□□ -0.16
CASP3-206ENST00000523916 FKBP8Q14318 412 aa14.04□□□□□ -0.16
CASP3-206ENST00000523916 CNTLNQ9NXG0 1405 aa14.03□□□□□ -0.16
CASP3-206ENST00000523916 WASHC2AQ641Q2 1341 aa14.03□□□□□ -0.16
CASP3-206ENST00000523916 C3P01024 1663 aa14.02□□□□□ -0.16
CASP3-206ENST00000523916 PTPN23Q9H3S7 1636 aa14.02□□□□□ -0.16
CASP3-206ENST00000523916 BRPF3Q9ULD4 1205 aa14.01□□□□□ -0.17
CASP3-206ENST00000523916 TCOF1Q13428 1488 aaKnown RBP14.01□□□□□ -0.17
CASP3-206ENST00000523916 LMTK3Q96Q04 1460 aa14.01□□□□□ -0.17
CASP3-206ENST00000523916 CROCC2H7BZ55 1655 aa14.01□□□□□ -0.17
CASP3-206ENST00000523916 DHX29Q7Z478 1369 aaKnown RBP14.01□□□□□ -0.17
CASP3-206ENST00000523916 PREX1Q8TCU6 1659 aa14.01□□□□□ -0.17
CASP3-206ENST00000523916 IRX6P78412 446 aaPredicted RBP14□□□□□ -0.17
CASP3-206ENST00000523916 SETD1BQ9UPS6 1966 aaKnown RBP14□□□□□ -0.17
CASP3-206ENST00000523916 FAM135AQ9P2D6 1515 aa14□□□□□ -0.17
CASP3-206ENST00000523916 HSP90B1P14625 803 aaKnown RBP13.99□□□□□ -0.17
CASP3-206ENST00000523916 FGD6Q6ZV73 1430 aa13.99□□□□□ -0.17
CASP3-206ENST00000523916 TEX2Q8IWB9 1127 aa13.99□□□□□ -0.17
CASP3-206ENST00000523916 PPP6R1Q9UPN7 881 aa13.99□□□□□ -0.17
CASP3-206ENST00000523916 SHANK2Q9UPX8 1470 aa13.99□□□□□ -0.17
CASP3-206ENST00000523916 TSPY4P0CV99 314 aa13.98□□□□□ -0.17
CASP3-206ENST00000523916 TSPY10P0CW01 314 aa13.98□□□□□ -0.17
CASP3-206ENST00000523916 STAC3Q96MF2 364 aa13.98□□□□□ -0.17
CASP3-206ENST00000523916 DNMT1P26358 1616 aaKnown RBP13.98□□□□□ -0.17
CASP3-206ENST00000523916 CHRM1P11229 460 aaPredicted RBP13.98□□□□□ -0.17
CASP3-206ENST00000523916 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.98□□□□□ -0.17
CASP3-206ENST00000523916 FAM43AQ8N2R8 423 aa13.98□□□□□ -0.17
CASP3-206ENST00000523916 CANXP27824 592 aaKnown RBP13.97□□□□□ -0.17
CASP3-206ENST00000523916 CLTCQ00610 1675 aaKnown RBP13.97□□□□□ -0.17
CASP3-206ENST00000523916 CDK11BP21127 795 aaKnown RBP13.97□□□□□ -0.17
CASP3-206ENST00000523916 CALD1Q05682 793 aaKnown RBP13.97□□□□□ -0.17
CASP3-206ENST00000523916 EIF2AK4Q9P2K8 1649 aaKnown RBP13.97□□□□□ -0.17
CASP3-206ENST00000523916 ESF1Q9H501 851 aaKnown RBP13.96□□□□□ -0.17
CASP3-206ENST00000523916 RNF17Q9BXT8 1623 aaKnown RBP13.95□□□□□ -0.18
CASP3-206ENST00000523916 ITGAEP38570 1179 aa13.95□□□□□ -0.18
CASP3-206ENST00000523916 ABCC5O15440 1437 aa13.94□□□□□ -0.18
CASP3-206ENST00000523916 NPATQ14207 1427 aa13.94□□□□□ -0.18
CASP3-206ENST00000523916 SECISBP2LQ93073 1101 aaKnown RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms