RNA–Protein interactions for RNA: ENST00000523777.5

TRAPPC9-214, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-214ENST00000523777 ROCK1Q13464 1354 aa24.57■■□□□ 1.52
TRAPPC9-214ENST00000523777 MROH2AA6NES4 1674 aa24.54■■□□□ 1.52
TRAPPC9-214ENST00000523777 RNF17Q9BXT8 1623 aaKnown RBP24.53■■□□□ 1.52
TRAPPC9-214ENST00000523777 ITGAEP38570 1179 aa24.52■■□□□ 1.52
TRAPPC9-214ENST00000523777 PTPRKQ15262 1439 aa24.52■■□□□ 1.52
TRAPPC9-214ENST00000523777 WASHC2CQ9Y4E1 1318 aa24.49■■□□□ 1.51
TRAPPC9-214ENST00000523777 CLTCQ00610 1675 aaKnown RBP24.48■■□□□ 1.51
TRAPPC9-214ENST00000523777 KDM5DQ9BY66 1539 aa24.48■■□□□ 1.51
TRAPPC9-214ENST00000523777 ANKRD50Q9ULJ7 1429 aa24.48■■□□□ 1.51
TRAPPC9-214ENST00000523777 SETD1BQ9UPS6 1966 aaKnown RBP24.47■■□□□ 1.51
TRAPPC9-214ENST00000523777 ZMYM3Q14202 1370 aa24.47■■□□□ 1.51
TRAPPC9-214ENST00000523777 C3P01024 1663 aa24.46■■□□□ 1.51
TRAPPC9-214ENST00000523777 ZC3H13Q5T200 1668 aaKnown RBP24.46■■□□□ 1.51
TRAPPC9-214ENST00000523777 KANK1Q14678 1352 aa24.44■■□□□ 1.5
TRAPPC9-214ENST00000523777 DEPDC5O75140 1603 aa24.43■■□□□ 1.5
TRAPPC9-214ENST00000523777 PLPPR3Q6T4P5 718 aa24.43■■□□□ 1.5
TRAPPC9-214ENST00000523777 PRDM15P57071 1507 aaPredicted RBP24.42■■□□□ 1.5
TRAPPC9-214ENST00000523777 CEBPAP49715 358 aaPredicted RBP24.42■■□□□ 1.5
TRAPPC9-214ENST00000523777 NPATQ14207 1427 aa24.41■■□□□ 1.5
TRAPPC9-214ENST00000523777 MROH1Q8NDA8 1641 aa24.4■■□□□ 1.5
TRAPPC9-214ENST00000523777 ABCC3O15438 1527 aa24.38■■□□□ 1.49
TRAPPC9-214ENST00000523777 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.36■■□□□ 1.49
TRAPPC9-214ENST00000523777 PREX1Q8TCU6 1659 aa24.35■■□□□ 1.49
TRAPPC9-214ENST00000523777 PZPP20742 1482 aa24.35■■□□□ 1.49
TRAPPC9-214ENST00000523777 HFM1A2PYH4 1435 aa24.33■■□□□ 1.49
TRAPPC9-214ENST00000523777 CEP152O94986 1710 aa24.32■■□□□ 1.48
TRAPPC9-214ENST00000523777 GCC2Q8IWJ2 1684 aa24.32■■□□□ 1.48
TRAPPC9-214ENST00000523777 UHRF1BP1Q6BDS2 1440 aa24.32■■□□□ 1.48
TRAPPC9-214ENST00000523777 VWDEQ8N2E2 1590 aa24.32■■□□□ 1.48
TRAPPC9-214ENST00000523777 LMTK2Q8IWU2 1503 aa24.31■■□□□ 1.48
TRAPPC9-214ENST00000523777 UNC13BO14795 1591 aa24.31■■□□□ 1.48
TRAPPC9-214ENST00000523777 NAIPQ13075 1403 aa24.31■■□□□ 1.48
TRAPPC9-214ENST00000523777 CAMSAP1Q5T5Y3 1602 aa24.31■■□□□ 1.48
TRAPPC9-214ENST00000523777 ARHGAP31Q2M1Z3 1444 aa24.3■■□□□ 1.48
TRAPPC9-214ENST00000523777 LMTK3Q96Q04 1460 aa24.28■■□□□ 1.48
TRAPPC9-214ENST00000523777 ACIN1Q9UKV3 1341 aaKnown RBP24.28■■□□□ 1.48
TRAPPC9-214ENST00000523777 TNRQ92752 1358 aa24.24■■□□□ 1.47
TRAPPC9-214ENST00000523777 NUP155O75694 1391 aa24.23■■□□□ 1.47
TRAPPC9-214ENST00000523777 TET3O43151 1660 aa24.22■■□□□ 1.47
TRAPPC9-214ENST00000523777 IQGAP3Q86VI3 1631 aa24.22■■□□□ 1.47
TRAPPC9-214ENST00000523777 SPATA31D1Q6ZQQ2 1576 aa24.22■■□□□ 1.47
TRAPPC9-214ENST00000523777 RPRD2Q5VT52 1461 aaKnown RBP24.22■■□□□ 1.47
TRAPPC9-214ENST00000523777 FBXO31Q5XUX0 539 aaPredicted RBP24.22■■□□□ 1.47
TRAPPC9-214ENST00000523777 EFCAB6Q5THR3 1501 aa24.21■■□□□ 1.47
TRAPPC9-214ENST00000523777 ERVK-7P63135 1459 aa24.2■■□□□ 1.47
TRAPPC9-214ENST00000523777 MYO3AQ8NEV4 1616 aa24.2■■□□□ 1.46
TRAPPC9-214ENST00000523777 CFAP65Q6ZU64 1925 aaKnown RBP24.2■■□□□ 1.46
TRAPPC9-214ENST00000523777 NLRP1Q9C000 1473 aa24.19■■□□□ 1.46
TRAPPC9-214ENST00000523777 ZNF142P52746 1687 aaPredicted RBP24.18■■□□□ 1.46
TRAPPC9-214ENST00000523777 A2ML1A8K2U0 1454 aa24.16■■□□□ 1.46
TRAPPC9-214ENST00000523777 CEP170BQ9Y4F5 1589 aaPredicted RBP24.16■■□□□ 1.46
TRAPPC9-214ENST00000523777 SETD5Q9C0A6 1442 aa24.14■■□□□ 1.45
TRAPPC9-214ENST00000523777 TRIM52Q96A61 297 aa24.13■■□□□ 1.45
TRAPPC9-214ENST00000523777 HSPA2P54652 639 aa24.12■■□□□ 1.45
TRAPPC9-214ENST00000523777 NOS1P29475 1434 aa24.1■■□□□ 1.45
TRAPPC9-214ENST00000523777 THEMISQ8N1K5 641 aaPredicted RBP24.09■■□□□ 1.45
TRAPPC9-214ENST00000523777 SLC52A1Q9NWF4 448 aa24.09■■□□□ 1.45
TRAPPC9-214ENST00000523777 E9PCH4 1651 aa24.08■■□□□ 1.45
TRAPPC9-214ENST00000523777 DMRT2Q9Y5R5 561 aa24.07■■□□□ 1.44
TRAPPC9-214ENST00000523777 UGGT1Q9NYU2 1555 aa24.07■■□□□ 1.44
TRAPPC9-214ENST00000523777 PLA2R1Q13018 1463 aa24.07■■□□□ 1.44
TRAPPC9-214ENST00000523777 HRCP23327 699 aa24.05■■□□□ 1.44
TRAPPC9-214ENST00000523777 SLC4A1APQ9BWU0 796 aaKnown RBP24.04■■□□□ 1.44
TRAPPC9-214ENST00000523777 KDM5AP29375 1690 aaKnown RBP24.03■■□□□ 1.44
TRAPPC9-214ENST00000523777 PKD2Q13563 968 aa24.02■■□□□ 1.44
TRAPPC9-214ENST00000523777 SYNMO15061 1565 aa24.02■■□□□ 1.44
TRAPPC9-214ENST00000523777 RAB3GAP2Q9H2M9 1393 aa24.02■■□□□ 1.44
TRAPPC9-214ENST00000523777 STAG3Q9UJ98 1225 aa24.01■■□□□ 1.43
TRAPPC9-214ENST00000523777 IDI1Q13907 227 aa24■■□□□ 1.43
TRAPPC9-214ENST00000523777 UBR1Q8IWV7 1749 aa23.99■■□□□ 1.43
TRAPPC9-214ENST00000523777 STRCQ7RTU9 1775 aa23.99■■□□□ 1.43
TRAPPC9-214ENST00000523777 SPHKAPQ2M3C7 1700 aa23.98■■□□□ 1.43
TRAPPC9-214ENST00000523777 PIK3C2BO00750 1634 aa23.97■■□□□ 1.43
TRAPPC9-214ENST00000523777 PTPRTO14522 1441 aa23.97■■□□□ 1.43
TRAPPC9-214ENST00000523777 TRIM26Q12899 539 aaPredicted RBP23.96■■□□□ 1.43
TRAPPC9-214ENST00000523777 ANKLE2Q86XL3 938 aa23.96■■□□□ 1.43
TRAPPC9-214ENST00000523777 MPHOSPH9Q99550 1183 aa23.95■■□□□ 1.42
TRAPPC9-214ENST00000523777 ADGRB3O60242 1522 aa23.93■■□□□ 1.42
TRAPPC9-214ENST00000523777 POLR1AO95602 1720 aaPredicted RBP23.93■■□□□ 1.42
TRAPPC9-214ENST00000523777 SLIT1O75093 1534 aa23.91■■□□□ 1.42
TRAPPC9-214ENST00000523777 EID1Q9Y6B2 187 aa23.91■■□□□ 1.42
TRAPPC9-214ENST00000523777 TRPM2O94759 1503 aa23.9■■□□□ 1.42
TRAPPC9-214ENST00000523777 NCKAP5LQ9HCH0 1330 aa23.9■■□□□ 1.42
TRAPPC9-214ENST00000523777 HDGFP51858 240 aaKnown RBP23.9■■□□□ 1.42
TRAPPC9-214ENST00000523777 ARHGAP23Q9P227 1491 aa23.88■■□□□ 1.41
TRAPPC9-214ENST00000523777 TMEM2Q9UHN6 1383 aa23.88■■□□□ 1.41
TRAPPC9-214ENST00000523777 TMEM131LA2VDJ0 1609 aa23.87■■□□□ 1.41
TRAPPC9-214ENST00000523777 MED14O60244 1454 aa23.86■■□□□ 1.41
TRAPPC9-214ENST00000523777 CHGAP10645 457 aaKnown RBP23.85■■□□□ 1.41
TRAPPC9-214ENST00000523777 TXNDC2Q86VQ3 553 aa23.85■■□□□ 1.41
TRAPPC9-214ENST00000523777 SCAF11Q99590 1463 aaKnown RBP23.85■■□□□ 1.41
TRAPPC9-214ENST00000523777 KIF1BO60333 1816 aa23.83■■□□□ 1.41
TRAPPC9-214ENST00000523777 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.82■■□□□ 1.4
TRAPPC9-214ENST00000523777 MYO5BQ9ULV0 1848 aa23.82■■□□□ 1.4
TRAPPC9-214ENST00000523777 NEURL4Q96JN8 1562 aa23.82■■□□□ 1.4
TRAPPC9-214ENST00000523777 NPHP4O75161 1426 aaPredicted RBP23.81■■□□□ 1.4
TRAPPC9-214ENST00000523777 CLTCL1P53675 1640 aa23.81■■□□□ 1.4
TRAPPC9-214ENST00000523777 CCDC144AA2RUR9 1427 aa23.79■■□□□ 1.4
TRAPPC9-214ENST00000523777 IQGAP1P46940 1657 aa23.79■■□□□ 1.4
TRAPPC9-214ENST00000523777 LTKP29376 864 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms