RNA–Protein interactions for RNA: ENST00000523637.2

MSRA-209, Transcript of methionine sulfoxide reductase A, humanhuman

TSL 2

Gene MSRA, Length 1,092 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-209ENST00000523637 FAM135BQ49AJ0 1406 aa12.47□□□□□ -0.41
MSRA-209ENST00000523637 GGT6Q6P531 493 aa12.47□□□□□ -0.41
MSRA-209ENST00000523637 SYNMO15061 1565 aa12.47□□□□□ -0.41
MSRA-209ENST00000523637 ZNF772Q68DY9 489 aaPredicted RBP12.46□□□□□ -0.41
MSRA-209ENST00000523637 MED14O60244 1454 aa12.46□□□□□ -0.42
MSRA-209ENST00000523637 SP7Q8TDD2 431 aaPredicted RBP12.45□□□□□ -0.42
MSRA-209ENST00000523637 NPM3O75607 178 aaKnown RBP12.44□□□□□ -0.42
MSRA-209ENST00000523637 CHRDL2Q6WN34 429 aa12.44□□□□□ -0.42
MSRA-209ENST00000523637 THEMISQ8N1K5 641 aaPredicted RBP12.44□□□□□ -0.42
MSRA-209ENST00000523637 TNRQ92752 1358 aa12.43□□□□□ -0.42
MSRA-209ENST00000523637 KIDINS220Q9ULH0 1771 aa12.43□□□□□ -0.42
MSRA-209ENST00000523637 ABCC1P33527 1531 aa12.43□□□□□ -0.42
MSRA-209ENST00000523637 RXRBP28702 533 aa12.43□□□□□ -0.42
MSRA-209ENST00000523637 CDK11AQ9UQ88 783 aaPredicted RBP12.43□□□□□ -0.42
MSRA-209ENST00000523637 ABCB7O75027 752 aa12.42□□□□□ -0.42
MSRA-209ENST00000523637 MEX3CQ5U5Q3 659 aaKnown RBP12.42□□□□□ -0.42
MSRA-209ENST00000523637 ATP1B4Q9UN42 357 aaPredicted RBP12.42□□□□□ -0.42
MSRA-209ENST00000523637 KIF14Q15058 1648 aa12.41□□□□□ -0.42
MSRA-209ENST00000523637 FBXO31Q5XUX0 539 aaPredicted RBP12.41□□□□□ -0.42
MSRA-209ENST00000523637 ZRANB1Q9UGI0 708 aa12.41□□□□□ -0.42
MSRA-209ENST00000523637 JCADQ9P266 1359 aa12.41□□□□□ -0.42
MSRA-209ENST00000523637 STRCP1A6NGW2 1772 aa12.41□□□□□ -0.42
MSRA-209ENST00000523637 FAM135AQ9P2D6 1515 aa12.39□□□□□ -0.43
MSRA-209ENST00000523637 DEPDC5O75140 1603 aa12.39□□□□□ -0.43
MSRA-209ENST00000523637 IQGAP1P46940 1657 aa12.38□□□□□ -0.43
MSRA-209ENST00000523637 SPAG9O60271 1321 aaKnown RBP12.38□□□□□ -0.43
MSRA-209ENST00000523637 CLIP1P30622 1438 aa12.37□□□□□ -0.43
MSRA-209ENST00000523637 TROQ12816 1431 aaPredicted RBP12.37□□□□□ -0.43
MSRA-209ENST00000523637 A2MP01023 1474 aa12.37□□□□□ -0.43
MSRA-209ENST00000523637 ITSN2Q9NZM3 1697 aa12.37□□□□□ -0.43
MSRA-209ENST00000523637 UGGT1Q9NYU2 1555 aa12.36□□□□□ -0.43
MSRA-209ENST00000523637 CDK12Q9NYV4 1490 aaPredicted RBP12.36□□□□□ -0.43
MSRA-209ENST00000523637 RBM33Q96EV2 1170 aaKnown RBP12.36□□□□□ -0.43
MSRA-209ENST00000523637 SAMD9LQ8IVG5 1584 aa12.35□□□□□ -0.43
MSRA-209ENST00000523637 SETBP1Q9Y6X0 1596 aa12.35□□□□□ -0.43
MSRA-209ENST00000523637 RBM42Q9BTD8 480 aaKnown RBP12.35□□□□□ -0.43
MSRA-209ENST00000523637 LRP6O75581 1613 aa12.35□□□□□ -0.43
MSRA-209ENST00000523637 ROBO1Q9Y6N7 1651 aa12.35□□□□□ -0.43
MSRA-209ENST00000523637 PLXNC1O60486 1568 aa12.35□□□□□ -0.43
MSRA-209ENST00000523637 SPATA31A6Q5VVP1 1343 aa12.34□□□□□ -0.43
MSRA-209ENST00000523637 NLRP1Q9C000 1473 aa12.34□□□□□ -0.43
MSRA-209ENST00000523637 ZNF219Q9P2Y4 722 aaPredicted RBP12.33□□□□□ -0.44
MSRA-209ENST00000523637 CDC42BPBQ9Y5S2 1711 aa12.32□□□□□ -0.44
MSRA-209ENST00000523637 MIA2Q96PC5 1412 aa12.32□□□□□ -0.44
MSRA-209ENST00000523637 NUTM2BA6NNL0 878 aaPredicted RBP12.32□□□□□ -0.44
MSRA-209ENST00000523637 NUTM2EB1AL46 878 aaPredicted RBP12.32□□□□□ -0.44
MSRA-209ENST00000523637 NUTM2DQ5VT03 806 aaPredicted RBP12.32□□□□□ -0.44
MSRA-209ENST00000523637 NUTM2AQ8IVF1 878 aaPredicted RBP12.32□□□□□ -0.44
MSRA-209ENST00000523637 ZNF777Q9ULD5 760 aaPredicted RBP12.32□□□□□ -0.44
MSRA-209ENST00000523637 PZPP20742 1482 aa12.32□□□□□ -0.44
MSRA-209ENST00000523637 KDM5DQ9BY66 1539 aa12.32□□□□□ -0.44
MSRA-209ENST00000523637 TMEM94Q12767 1356 aa12.31□□□□□ -0.44
MSRA-209ENST00000523637 ATP7AQ04656 1500 aa12.31□□□□□ -0.44
MSRA-209ENST00000523637 LRRC9Q6ZRR7 1453 aa12.3□□□□□ -0.44
MSRA-209ENST00000523637 PREX2Q70Z35 1606 aa12.29□□□□□ -0.44
MSRA-209ENST00000523637 RGS12O14924 1447 aa12.29□□□□□ -0.44
MSRA-209ENST00000523637 HNRNPMP52272 730 aaKnown RBP eCLIP12.29□□□□□ -0.44
MSRA-209ENST00000523637 SYCP2Q9BX26 1530 aa12.27□□□□□ -0.44
MSRA-209ENST00000523637 IFFO2Q5TF58 517 aa12.27□□□□□ -0.45
MSRA-209ENST00000523637 PHLPP1O60346 1717 aa12.27□□□□□ -0.45
MSRA-209ENST00000523637 XIRP1Q702N8 1843 aaKnown RBP12.27□□□□□ -0.45
MSRA-209ENST00000523637 ZC3H13Q5T200 1668 aaKnown RBP12.26□□□□□ -0.45
MSRA-209ENST00000523637 CSRNP3Q8WYN3 585 aa12.26□□□□□ -0.45
MSRA-209ENST00000523637 AFF2P51816 1311 aa12.26□□□□□ -0.45
MSRA-209ENST00000523637 ATAD2Q6PL18 1390 aa12.26□□□□□ -0.45
MSRA-209ENST00000523637 FGD6Q6ZV73 1430 aa12.26□□□□□ -0.45
MSRA-209ENST00000523637 SLAIN2Q9P270 581 aa12.25□□□□□ -0.45
MSRA-209ENST00000523637 WASHC2CQ9Y4E1 1318 aa12.25□□□□□ -0.45
MSRA-209ENST00000523637 SCAF11Q99590 1463 aaKnown RBP12.25□□□□□ -0.45
MSRA-209ENST00000523637 RBM6P78332 1123 aaKnown RBP12.24□□□□□ -0.45
MSRA-209ENST00000523637 FMN1Q68DA7 1419 aa12.24□□□□□ -0.45
MSRA-209ENST00000523637 PROSER2Q86WR7 435 aaPredicted RBP12.24□□□□□ -0.45
MSRA-209ENST00000523637 INO80Q9ULG1 1556 aaPredicted RBP12.24□□□□□ -0.45
MSRA-209ENST00000523637 APLP2Q06481 763 aa12.23□□□□□ -0.45
MSRA-209ENST00000523637 TXNDC2Q86VQ3 553 aa12.23□□□□□ -0.45
MSRA-209ENST00000523637 COL16A1Q07092 1604 aaPredicted RBP12.22□□□□□ -0.45
MSRA-209ENST00000523637 MAP3K1Q13233 1512 aa12.22□□□□□ -0.45
MSRA-209ENST00000523637 MSH6P52701 1360 aa12.22□□□□□ -0.45
MSRA-209ENST00000523637 LTKP29376 864 aa12.22□□□□□ -0.45
MSRA-209ENST00000523637 KIF3BO15066 747 aa12.21□□□□□ -0.45
MSRA-209ENST00000523637 QTRT2Q9H974 415 aaKnown RBP12.21□□□□□ -0.45
MSRA-209ENST00000523637 KCNA6P17658 529 aa12.2□□□□□ -0.46
MSRA-209ENST00000523637 KIAA1107Q9UPP5 1409 aa12.19□□□□□ -0.46
MSRA-209ENST00000523637 DHX29Q7Z478 1369 aaKnown RBP12.18□□□□□ -0.46
MSRA-209ENST00000523637 EID1Q9Y6B2 187 aa12.18□□□□□ -0.46
MSRA-209ENST00000523637 ADGBQ8N7X0 1667 aa12.17□□□□□ -0.46
MSRA-209ENST00000523637 PLEKHH2Q8IVE3 1493 aa12.17□□□□□ -0.46
MSRA-209ENST00000523637 NGLY1Q96IV0 654 aa12.17□□□□□ -0.46
MSRA-209ENST00000523637 PRDM15P57071 1507 aaPredicted RBP12.16□□□□□ -0.46
MSRA-209ENST00000523637 CCDC125Q86Z20 511 aa12.16□□□□□ -0.46
MSRA-209ENST00000523637 YY1P25490 414 aa12.15□□□□□ -0.46
MSRA-209ENST00000523637 C8orf37Q96NL8 207 aa12.15□□□□□ -0.46
MSRA-209ENST00000523637 NCOA2Q15596 1464 aa12.14□□□□□ -0.47
MSRA-209ENST00000523637 CDC42BPAQ5VT25 1732 aa12.14□□□□□ -0.47
MSRA-209ENST00000523637 CFDP1Q9UEE9 299 aaPredicted RBP12.14□□□□□ -0.47
MSRA-209ENST00000523637 ARHGAP23Q9P227 1491 aa12.14□□□□□ -0.47
MSRA-209ENST00000523637 TIAM1Q13009 1591 aa12.13□□□□□ -0.47
MSRA-209ENST00000523637 SHPRHQ149N8 1683 aa12.13□□□□□ -0.47
MSRA-209ENST00000523637 GPATCH8Q9UKJ3 1502 aaKnown RBP12.13□□□□□ -0.47
MSRA-209ENST00000523637 LRP5O75197 1615 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms