RNA–Protein interactions for RNA: ENST00000523190.5

PVT1-217, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 443 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-217ENST00000523190 FRMPD1Q5SYB0 1578 aa9.85□□□□□ -0.83
PVT1-217ENST00000523190 ERBINQ96RT1 1412 aa9.85□□□□□ -0.83
PVT1-217ENST00000523190 KDM5DQ9BY66 1539 aa9.85□□□□□ -0.83
PVT1-217ENST00000523190 MLH3Q9UHC1 1453 aa9.85□□□□□ -0.83
PVT1-217ENST00000523190 RAPGEF3O95398 923 aa9.84□□□□□ -0.83
PVT1-217ENST00000523190 MPHOSPH9Q99550 1183 aa9.84□□□□□ -0.83
PVT1-217ENST00000523190 ABCA6Q8N139 1617 aa9.84□□□□□ -0.83
PVT1-217ENST00000523190 SIN3AQ96ST3 1273 aa9.83□□□□□ -0.84
PVT1-217ENST00000523190 NUP155O75694 1391 aa9.83□□□□□ -0.84
PVT1-217ENST00000523190 DIP2CQ9Y2E4 1556 aa9.82□□□□□ -0.84
PVT1-217ENST00000523190 ZMYM4Q5VZL5 1548 aa9.82□□□□□ -0.84
PVT1-217ENST00000523190 A2MP01023 1474 aa9.81□□□□□ -0.84
PVT1-217ENST00000523190 MAGI2Q86UL8 1455 aa9.81□□□□□ -0.84
PVT1-217ENST00000523190 DHX29Q7Z478 1369 aaKnown RBP9.81□□□□□ -0.84
PVT1-217ENST00000523190 MSH5O43196 834 aa9.81□□□□□ -0.84
PVT1-217ENST00000523190 EIF2AK4Q9P2K8 1649 aaKnown RBP9.81□□□□□ -0.84
PVT1-217ENST00000523190 FAM135AQ9P2D6 1515 aa9.81□□□□□ -0.84
PVT1-217ENST00000523190 YEATS2Q9ULM3 1422 aa9.81□□□□□ -0.84
PVT1-217ENST00000523190 NEUROD1Q13562 356 aa9.8□□□□□ -0.84
PVT1-217ENST00000523190 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.8□□□□□ -0.843e-6■□□□□ 10.5
PVT1-217ENST00000523190 IQGAP3Q86VI3 1631 aa9.8□□□□□ -0.84
PVT1-217ENST00000523190 COL17A1Q9UMD9 1497 aaPredicted RBP9.79□□□□□ -0.84
PVT1-217ENST00000523190 DEPDC5O75140 1603 aa9.79□□□□□ -0.84
PVT1-217ENST00000523190 TRHP20396 242 aaPredicted RBP9.79□□□□□ -0.84
PVT1-217ENST00000523190 KIF3BO15066 747 aa9.78□□□□□ -0.84
PVT1-217ENST00000523190 PKD2Q13563 968 aa9.78□□□□□ -0.84
PVT1-217ENST00000523190 MROH1Q8NDA8 1641 aa9.78□□□□□ -0.84
PVT1-217ENST00000523190 PRDM15P57071 1507 aaPredicted RBP9.77□□□□□ -0.84
PVT1-217ENST00000523190 ANKRD30BQ9BXX2 1392 aa9.77□□□□□ -0.84
PVT1-217ENST00000523190 RNF17Q9BXT8 1623 aaKnown RBP9.76□□□□□ -0.85
PVT1-217ENST00000523190 BCORL1Q5H9F3 1711 aa9.76□□□□□ -0.85
PVT1-217ENST00000523190 VWDEQ8N2E2 1590 aa9.75□□□□□ -0.85
PVT1-217ENST00000523190 FOXD4L1Q9NU39 408 aa9.75□□□□□ -0.85
PVT1-217ENST00000523190 KANK1Q14678 1352 aa9.75□□□□□ -0.85
PVT1-217ENST00000523190 TONSLQ96HA7 1378 aa9.75□□□□□ -0.85
PVT1-217ENST00000523190 ARHGEF40Q8TER5 1519 aa9.74□□□□□ -0.85
PVT1-217ENST00000523190 CEP152O94986 1710 aa9.73□□□□□ -0.85
PVT1-217ENST00000523190 ATP10AO60312 1499 aa9.73□□□□□ -0.85
PVT1-217ENST00000523190 E9PCH4 1651 aa9.73□□□□□ -0.85
PVT1-217ENST00000523190 TET3O43151 1660 aa9.73□□□□□ -0.85
PVT1-217ENST00000523190 RPRD2Q5VT52 1461 aaKnown RBP9.72□□□□□ -0.85
PVT1-217ENST00000523190 REREQ9P2R6 1566 aa9.72□□□□□ -0.85
PVT1-217ENST00000523190 GGT6Q6P531 493 aa9.71□□□□□ -0.86
PVT1-217ENST00000523190 TIMELESSQ9UNS1 1208 aa9.71□□□□□ -0.86
PVT1-217ENST00000523190 LMTK2Q8IWU2 1503 aa9.71□□□□□ -0.86
PVT1-217ENST00000523190 SIGLEC1Q9BZZ2 1709 aa9.7□□□□□ -0.86
PVT1-217ENST00000523190 PLA2R1Q13018 1463 aa9.7□□□□□ -0.86
PVT1-217ENST00000523190 ABCC3O15438 1527 aa9.7□□□□□ -0.86
PVT1-217ENST00000523190 AGLP35573 1532 aa9.7□□□□□ -0.86
PVT1-217ENST00000523190 EFCAB6Q5THR3 1501 aa9.7□□□□□ -0.86
PVT1-217ENST00000523190 SPHKAPQ2M3C7 1700 aa9.68□□□□□ -0.86
PVT1-217ENST00000523190 CCDC144AA2RUR9 1427 aa9.68□□□□□ -0.86
PVT1-217ENST00000523190 ZBTB22O15209 634 aa9.68□□□□□ -0.86
PVT1-217ENST00000523190 PPP1R15AO75807 674 aaPredicted RBP9.68□□□□□ -0.86
PVT1-217ENST00000523190 ZC3H13Q5T200 1668 aaKnown RBP9.67□□□□□ -0.86
PVT1-217ENST00000523190 CAMSAP1Q5T5Y3 1602 aa9.67□□□□□ -0.86
PVT1-217ENST00000523190 TRPM2O94759 1503 aa9.67□□□□□ -0.86
PVT1-217ENST00000523190 L3MBTL2Q969R5 705 aa9.67□□□□□ -0.86
PVT1-217ENST00000523190 PTPRTO14522 1441 aa9.66□□□□□ -0.86
PVT1-217ENST00000523190 WASHC2CQ9Y4E1 1318 aa9.66□□□□□ -0.86
PVT1-217ENST00000523190 CLTCL1P53675 1640 aa9.66□□□□□ -0.86
PVT1-217ENST00000523190 NPATQ14207 1427 aa9.65□□□□□ -0.86
PVT1-217ENST00000523190 MLECQ14165 292 aa9.64□□□□□ -0.87
PVT1-217ENST00000523190 RNF216Q9NWF9 866 aaPredicted RBP9.64□□□□□ -0.87
PVT1-217ENST00000523190 UGGT1Q9NYU2 1555 aa9.63□□□□□ -0.87
PVT1-217ENST00000523190 CLTCQ00610 1675 aaKnown RBP9.62□□□□□ -0.87
PVT1-217ENST00000523190 ARHGAP31Q2M1Z3 1444 aa9.62□□□□□ -0.87
PVT1-217ENST00000523190 ARID4BQ4LE39 1312 aaPredicted RBP9.61□□□□□ -0.87
PVT1-217ENST00000523190 ZNF316A6NFI3 1004 aaPredicted RBP9.61□□□□□ -0.87
PVT1-217ENST00000523190 NBPF8Q3BBV2 869 aa9.61□□□□□ -0.87
PVT1-217ENST00000523190 NOS1P29475 1434 aa9.61□□□□□ -0.87
PVT1-217ENST00000523190 SPATA31E1Q6ZUB1 1445 aa9.61□□□□□ -0.87
PVT1-217ENST00000523190 CNTLNQ9NXG0 1405 aa9.61□□□□□ -0.87
PVT1-217ENST00000523190 SYNMO15061 1565 aa9.6□□□□□ -0.87
PVT1-217ENST00000523190 RGL3Q3MIN7 710 aa9.6□□□□□ -0.87
PVT1-217ENST00000523190 MROH2AA6NES4 1674 aa9.6□□□□□ -0.87
PVT1-217ENST00000523190 PREX1Q8TCU6 1659 aa9.6□□□□□ -0.87
PVT1-217ENST00000523190 ZNF326Q5BKZ1 582 aaKnown RBP9.59□□□□□ -0.87
PVT1-217ENST00000523190 CFAP65Q6ZU64 1925 aaKnown RBP9.58□□□□□ -0.88
PVT1-217ENST00000523190 UHRF1BP1Q6BDS2 1440 aa9.58□□□□□ -0.88
PVT1-217ENST00000523190 ADGRB3O60242 1522 aa9.58□□□□□ -0.88
PVT1-217ENST00000523190 DCAF11Q8TEB1 546 aa9.58□□□□□ -0.88
PVT1-217ENST00000523190 KDM2AQ9Y2K7 1162 aa9.58□□□□□ -0.88
PVT1-217ENST00000523190 KIF1BO60333 1816 aa9.58□□□□□ -0.88
PVT1-217ENST00000523190 ERVK-7P63135 1459 aa9.58□□□□□ -0.88
PVT1-217ENST00000523190 PIK3C2BO00750 1634 aa9.57□□□□□ -0.88
PVT1-217ENST00000523190 ESF1Q9H501 851 aaKnown RBP9.57□□□□□ -0.88
PVT1-217ENST00000523190 NEURL4Q96JN8 1562 aa9.57□□□□□ -0.88
PVT1-217ENST00000523190 RALGAPBQ86X10 1494 aa9.56□□□□□ -0.88
PVT1-217ENST00000523190 CHGAP10645 457 aaKnown RBP9.56□□□□□ -0.88
PVT1-217ENST00000523190 FBXO31Q5XUX0 539 aaPredicted RBP9.56□□□□□ -0.88
PVT1-217ENST00000523190 PRAG1Q86YV5 1406 aa9.56□□□□□ -0.88
PVT1-217ENST00000523190 SPATA31D1Q6ZQQ2 1576 aa9.55□□□□□ -0.88
PVT1-217ENST00000523190 ZMYM3Q14202 1370 aa9.54□□□□□ -0.88
PVT1-217ENST00000523190 TRPM1Q7Z4N2 1603 aa9.54□□□□□ -0.88
PVT1-217ENST00000523190 MADDQ8WXG6 1647 aa9.54□□□□□ -0.88
PVT1-217ENST00000523190 HIRIP3Q9BW71 556 aaPredicted RBP9.54□□□□□ -0.88
PVT1-217ENST00000523190 FER1L4A9Z1Z3 1794 aa9.54□□□□□ -0.88
PVT1-217ENST00000523190 IFT172Q9UG01 1749 aa9.53□□□□□ -0.88
PVT1-217ENST00000523190 HSPA5P11021 654 aaKnown RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms