RNA–Protein interactions for RNA: ENST00000523139.5

BRD9-219, Transcript of bromodomain containing 9, humanhuman

TSL 3

Gene BRD9, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-219ENST00000523139 A2MP01023 1474 aa9.46□□□□□ -0.9
BRD9-219ENST00000523139 KDM5DQ9BY66 1539 aa9.46□□□□□ -0.9
BRD9-219ENST00000523139 UNC13BO14795 1591 aa9.46□□□□□ -0.9
BRD9-219ENST00000523139 RNF17Q9BXT8 1623 aaKnown RBP9.45□□□□□ -0.9
BRD9-219ENST00000523139 VWDEQ8N2E2 1590 aa9.43□□□□□ -0.9
BRD9-219ENST00000523139 PRDM15P57071 1507 aaPredicted RBP9.43□□□□□ -0.9
BRD9-219ENST00000523139 RAB3GAP2Q9H2M9 1393 aa9.43□□□□□ -0.9
BRD9-219ENST00000523139 YEATS2Q9ULM3 1422 aa9.42□□□□□ -0.9
BRD9-219ENST00000523139 ITGAEP38570 1179 aa9.42□□□□□ -0.9
BRD9-219ENST00000523139 CHIC2Q9UKJ5 165 aa9.42□□□□□ -0.9
BRD9-219ENST00000523139 IQGAP3Q86VI3 1631 aa9.42□□□□□ -0.9
BRD9-219ENST00000523139 CLSPNQ9HAW4 1339 aa9.41□□□□□ -0.9
BRD9-219ENST00000523139 RRP7BPQ9NSQ0 103 aa9.41□□□□□ -0.9
BRD9-219ENST00000523139 ZC3H13Q5T200 1668 aaKnown RBP9.41□□□□□ -0.9
BRD9-219ENST00000523139 LMTK2Q8IWU2 1503 aa9.41□□□□□ -0.9
BRD9-219ENST00000523139 MSH5O43196 834 aa9.4□□□□□ -0.9
BRD9-219ENST00000523139 SLC24A1O60721 1099 aa9.4□□□□□ -0.9
BRD9-219ENST00000523139 MROH1Q8NDA8 1641 aa9.4□□□□□ -0.9
BRD9-219ENST00000523139 TET3O43151 1660 aa9.37□□□□□ -0.91
BRD9-219ENST00000523139 PZPP20742 1482 aa9.36□□□□□ -0.91
BRD9-219ENST00000523139 RPRD2Q5VT52 1461 aaKnown RBP9.36□□□□□ -0.91
BRD9-219ENST00000523139 ARHGAP31Q2M1Z3 1444 aa9.36□□□□□ -0.91
BRD9-219ENST00000523139 SIGLEC1Q9BZZ2 1709 aa9.36□□□□□ -0.91
BRD9-219ENST00000523139 KANK1Q14678 1352 aa9.36□□□□□ -0.91
BRD9-219ENST00000523139 MYT1LQ9UL68 1186 aa9.35□□□□□ -0.91
BRD9-219ENST00000523139 MROH2AA6NES4 1674 aa9.35□□□□□ -0.91
BRD9-219ENST00000523139 DHX57Q6P158 1386 aaKnown RBP9.35□□□□□ -0.91
BRD9-219ENST00000523139 CNTLNQ9NXG0 1405 aa9.34□□□□□ -0.91
BRD9-219ENST00000523139 KIF3BO15066 747 aa9.34□□□□□ -0.91
BRD9-219ENST00000523139 NUP155O75694 1391 aa9.34□□□□□ -0.91
BRD9-219ENST00000523139 ABCC3O15438 1527 aa9.33□□□□□ -0.92
BRD9-219ENST00000523139 EFCAB6Q5THR3 1501 aa9.33□□□□□ -0.92
BRD9-219ENST00000523139 MPHOSPH9Q99550 1183 aa9.32□□□□□ -0.92
BRD9-219ENST00000523139 CAMSAP1Q5T5Y3 1602 aa9.31□□□□□ -0.92
BRD9-219ENST00000523139 MYT1Q01538 1121 aa9.31□□□□□ -0.92
BRD9-219ENST00000523139 NEURL4Q96JN8 1562 aa9.31□□□□□ -0.92
BRD9-219ENST00000523139 ADAMTSL3P82987 1691 aa9.31□□□□□ -0.92
BRD9-219ENST00000523139 PTPRTO14522 1441 aa9.31□□□□□ -0.92
BRD9-219ENST00000523139 E9PCH4 1651 aa9.3□□□□□ -0.92
BRD9-219ENST00000523139 SLC4A1APQ9BWU0 796 aaKnown RBP9.3□□□□□ -0.92
BRD9-219ENST00000523139 CEP152O94986 1710 aa9.3□□□□□ -0.92
BRD9-219ENST00000523139 ANKRD30BQ9BXX2 1392 aa9.28□□□□□ -0.92
BRD9-219ENST00000523139 TRPM2O94759 1503 aa9.28□□□□□ -0.92
BRD9-219ENST00000523139 TRIM52Q96A61 297 aa9.28□□□□□ -0.92
BRD9-219ENST00000523139 TIMELESSQ9UNS1 1208 aa9.28□□□□□ -0.92
BRD9-219ENST00000523139 NOS1P29475 1434 aa9.28□□□□□ -0.92
BRD9-219ENST00000523139 NPATQ14207 1427 aa9.28□□□□□ -0.92
BRD9-219ENST00000523139 WASHC2CQ9Y4E1 1318 aa9.28□□□□□ -0.92
BRD9-219ENST00000523139 SPHKAPQ2M3C7 1700 aa9.28□□□□□ -0.92
BRD9-219ENST00000523139 FER1L4A9Z1Z3 1794 aa9.27□□□□□ -0.92
BRD9-219ENST00000523139 CLTCQ00610 1675 aaKnown RBP9.27□□□□□ -0.93
BRD9-219ENST00000523139 GGT6Q6P531 493 aa9.27□□□□□ -0.93
BRD9-219ENST00000523139 SPATA31D1Q6ZQQ2 1576 aa9.27□□□□□ -0.93
BRD9-219ENST00000523139 KDM5AP29375 1690 aaKnown RBP9.26□□□□□ -0.93
BRD9-219ENST00000523139 PKD2Q13563 968 aa9.26□□□□□ -0.93
BRD9-219ENST00000523139 PIK3C2BO00750 1634 aa9.26□□□□□ -0.93
BRD9-219ENST00000523139 PREX1Q8TCU6 1659 aa9.26□□□□□ -0.93
BRD9-219ENST00000523139 PLA2R1Q13018 1463 aa9.25□□□□□ -0.93
BRD9-219ENST00000523139 ZMYM3Q14202 1370 aa9.24□□□□□ -0.93
BRD9-219ENST00000523139 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.24□□□□□ -0.93
BRD9-219ENST00000523139 C3P01024 1663 aa9.23□□□□□ -0.93
BRD9-219ENST00000523139 ERVK-7P63135 1459 aa9.23□□□□□ -0.93
BRD9-219ENST00000523139 STAC3Q96MF2 364 aa9.23□□□□□ -0.93
BRD9-219ENST00000523139 ESF1Q9H501 851 aaKnown RBP9.23□□□□□ -0.93
BRD9-219ENST00000523139 SLC52A1Q9NWF4 448 aa9.23□□□□□ -0.93
BRD9-219ENST00000523139 ARID4BQ4LE39 1312 aaPredicted RBP9.23□□□□□ -0.93
BRD9-219ENST00000523139 MADDQ8WXG6 1647 aa9.23□□□□□ -0.93
BRD9-219ENST00000523139 CCER1Q8TC90 406 aaPredicted RBP9.22□□□□□ -0.93
BRD9-219ENST00000523139 SETD1BQ9UPS6 1966 aaKnown RBP9.22□□□□□ -0.93
BRD9-219ENST00000523139 CCDC144AA2RUR9 1427 aa9.22□□□□□ -0.93
BRD9-219ENST00000523139 SYNMO15061 1565 aa9.21□□□□□ -0.93
BRD9-219ENST00000523139 ZEB1P37275 1124 aaPredicted RBP9.21□□□□□ -0.94
BRD9-219ENST00000523139 NLRP1Q9C000 1473 aa9.21□□□□□ -0.94
BRD9-219ENST00000523139 KIF1BO60333 1816 aa9.2□□□□□ -0.94
BRD9-219ENST00000523139 CLTCL1P53675 1640 aa9.2□□□□□ -0.94
BRD9-219ENST00000523139 RIMS1Q86UR5 1692 aaKnown RBP9.2□□□□□ -0.94
BRD9-219ENST00000523139 SPATA31E1Q6ZUB1 1445 aa9.19□□□□□ -0.94
BRD9-219ENST00000523139 ADGRB3O60242 1522 aa9.18□□□□□ -0.94
BRD9-219ENST00000523139 PTPRMP28827 1452 aa9.18□□□□□ -0.94
BRD9-219ENST00000523139 ZNF142P52746 1687 aaPredicted RBP9.18□□□□□ -0.94
BRD9-219ENST00000523139 TMEM131LA2VDJ0 1609 aa9.17□□□□□ -0.94
BRD9-219ENST00000523139 MLECQ14165 292 aa9.17□□□□□ -0.94
BRD9-219ENST00000523139 TNRQ92752 1358 aa9.16□□□□□ -0.94
BRD9-219ENST00000523139 RPGRIP1LQ68CZ1 1315 aa9.16□□□□□ -0.94
BRD9-219ENST00000523139 PPP4R3CPQ6ZMV5 832 aa9.16□□□□□ -0.94
BRD9-219ENST00000523139 IFT172Q9UG01 1749 aa9.16□□□□□ -0.94
BRD9-219ENST00000523139 CFAP65Q6ZU64 1925 aaKnown RBP9.15□□□□□ -0.94
BRD9-219ENST00000523139 ZFYVE9O95405 1425 aa9.15□□□□□ -0.94
BRD9-219ENST00000523139 MYOM2P54296 1465 aa9.15□□□□□ -0.95
BRD9-219ENST00000523139 UHRF1BP1Q6BDS2 1440 aa9.14□□□□□ -0.95
BRD9-219ENST00000523139 UBR1Q8IWV7 1749 aa9.14□□□□□ -0.95
BRD9-219ENST00000523139 MYO3AQ8NEV4 1616 aa9.14□□□□□ -0.95
BRD9-219ENST00000523139 IDI1Q13907 227 aa9.14□□□□□ -0.95
BRD9-219ENST00000523139 A2ML1A8K2U0 1454 aa9.14□□□□□ -0.95
BRD9-219ENST00000523139 TONSLQ96HA7 1378 aa9.13□□□□□ -0.95
BRD9-219ENST00000523139 FBXO31Q5XUX0 539 aaPredicted RBP9.13□□□□□ -0.95
BRD9-219ENST00000523139 SLIT1O75093 1534 aa9.13□□□□□ -0.95
BRD9-219ENST00000523139 PPLO60437 1756 aa9.13□□□□□ -0.95
BRD9-219ENST00000523139 NRXN1Q9ULB1 1477 aa9.13□□□□□ -0.95
BRD9-219ENST00000523139 UGGT1Q9NYU2 1555 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms