RNA–Protein interactions for RNA: ENST00000523004.1

GM2A-202, Transcript of GM2 ganglioside activator, humanhuman

TSL 1 (best)

Gene GM2A, Length 643 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GM2A-202ENST00000523004 DNMT1P26358 1616 aaKnown RBP12.58□□□□□ -0.4
GM2A-202ENST00000523004 FAM135AQ9P2D6 1515 aa12.57□□□□□ -0.4
GM2A-202ENST00000523004 ARHGEF5Q12774 1597 aa12.57□□□□□ -0.4
GM2A-202ENST00000523004 KDM5DQ9BY66 1539 aa12.57□□□□□ -0.4
GM2A-202ENST00000523004 DISP3Q9P2K9 1392 aa12.56□□□□□ -0.4
GM2A-202ENST00000523004 FBXO31Q5XUX0 539 aaPredicted RBP12.56□□□□□ -0.4
GM2A-202ENST00000523004 PZPP20742 1482 aa12.56□□□□□ -0.4
GM2A-202ENST00000523004 TNRQ92752 1358 aa12.56□□□□□ -0.4
GM2A-202ENST00000523004 TSPY4P0CV99 314 aa12.55□□□□□ -0.4
GM2A-202ENST00000523004 TSPY10P0CW01 314 aa12.55□□□□□ -0.4
GM2A-202ENST00000523004 WASHC2CQ9Y4E1 1318 aa12.55□□□□□ -0.4
GM2A-202ENST00000523004 VPS8Q8N3P4 1428 aa12.54□□□□□ -0.4
GM2A-202ENST00000523004 LRRC9Q6ZRR7 1453 aa12.54□□□□□ -0.4
GM2A-202ENST00000523004 ILDR2Q71H61 639 aa12.54□□□□□ -0.4
GM2A-202ENST00000523004 MIA2Q96PC5 1412 aa12.53□□□□□ -0.4
GM2A-202ENST00000523004 POLR1AO95602 1720 aaPredicted RBP12.52□□□□□ -0.41
GM2A-202ENST00000523004 LOC105371045A0A1W2PR82 267 aa12.52□□□□□ -0.41
GM2A-202ENST00000523004 UBAP1LF5GYI3 381 aa12.52□□□□□ -0.41
GM2A-202ENST00000523004 NEURL4Q96JN8 1562 aa12.52□□□□□ -0.41
GM2A-202ENST00000523004 MAST1Q9Y2H9 1570 aa12.52□□□□□ -0.41
GM2A-202ENST00000523004 NLRP1Q9C000 1473 aa12.51□□□□□ -0.41
GM2A-202ENST00000523004 MAP3K1Q13233 1512 aa12.51□□□□□ -0.41
GM2A-202ENST00000523004 KANK4Q5T7N3 995 aaPredicted RBP12.5□□□□□ -0.41
GM2A-202ENST00000523004 THEMISQ8N1K5 641 aaPredicted RBP12.5□□□□□ -0.41
GM2A-202ENST00000523004 SPATA31D1Q6ZQQ2 1576 aa12.5□□□□□ -0.41
GM2A-202ENST00000523004 RNF17Q9BXT8 1623 aaKnown RBP12.5□□□□□ -0.41
GM2A-202ENST00000523004 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.49□□□□□ -0.41
GM2A-202ENST00000523004 ANKLE2Q86XL3 938 aa12.49□□□□□ -0.41
GM2A-202ENST00000523004 UGGT1Q9NYU2 1555 aa12.48□□□□□ -0.41
GM2A-202ENST00000523004 EIF2AK4Q9P2K8 1649 aaKnown RBP12.48□□□□□ -0.41
GM2A-202ENST00000523004 ABCC3O15438 1527 aa12.47□□□□□ -0.41
GM2A-202ENST00000523004 CPS1P31327 1500 aa12.47□□□□□ -0.41
GM2A-202ENST00000523004 SHANK2Q9UPX8 1470 aa12.47□□□□□ -0.41
GM2A-202ENST00000523004 MYOM3Q5VTT5 1437 aa12.47□□□□□ -0.41
GM2A-202ENST00000523004 SOCS7O14512 581 aa12.47□□□□□ -0.41
GM2A-202ENST00000523004 ZC3H13Q5T200 1668 aaKnown RBP12.47□□□□□ -0.41
GM2A-202ENST00000523004 DEPDC5O75140 1603 aa12.47□□□□□ -0.41
GM2A-202ENST00000523004 MED14O60244 1454 aa12.46□□□□□ -0.41
GM2A-202ENST00000523004 CFAP65Q6ZU64 1925 aaKnown RBP12.45□□□□□ -0.42
GM2A-202ENST00000523004 MROH1Q8NDA8 1641 aa12.45□□□□□ -0.42
GM2A-202ENST00000523004 NPHP4O75161 1426 aaPredicted RBP12.45□□□□□ -0.42
GM2A-202ENST00000523004 VWDEQ8N2E2 1590 aa12.44□□□□□ -0.42
GM2A-202ENST00000523004 ERVK-7P63135 1459 aa12.44□□□□□ -0.42
GM2A-202ENST00000523004 DUOX2Q9NRD8 1548 aa12.43□□□□□ -0.42
GM2A-202ENST00000523004 TOM1O60784 492 aa12.43□□□□□ -0.42
GM2A-202ENST00000523004 CEP152O94986 1710 aa12.42□□□□□ -0.42
GM2A-202ENST00000523004 IQGAP1P46940 1657 aa12.42□□□□□ -0.42
GM2A-202ENST00000523004 KIF15Q9NS87 1388 aa12.41□□□□□ -0.42
GM2A-202ENST00000523004 ABCC5O15440 1437 aa12.4□□□□□ -0.42
GM2A-202ENST00000523004 ARHGAP31Q2M1Z3 1444 aa12.4□□□□□ -0.42
GM2A-202ENST00000523004 HSPA1LP34931 641 aa12.4□□□□□ -0.42
GM2A-202ENST00000523004 PIP4K2BP78356 416 aa12.4□□□□□ -0.42
GM2A-202ENST00000523004 CROCC2H7BZ55 1655 aa12.4□□□□□ -0.42
GM2A-202ENST00000523004 UBR1Q8IWV7 1749 aa12.4□□□□□ -0.43
GM2A-202ENST00000523004 SCAF1Q9H7N4 1312 aaKnown RBP12.39□□□□□ -0.43
GM2A-202ENST00000523004 ERBINQ96RT1 1412 aa12.39□□□□□ -0.43
GM2A-202ENST00000523004 STRCP1A6NGW2 1772 aa12.39□□□□□ -0.43
GM2A-202ENST00000523004 PRDM15P57071 1507 aaPredicted RBP12.39□□□□□ -0.43
GM2A-202ENST00000523004 PTPN23Q9H3S7 1636 aa12.38□□□□□ -0.43
GM2A-202ENST00000523004 ALKQ9UM73 1620 aa12.38□□□□□ -0.43
GM2A-202ENST00000523004 RRP7BPQ9NSQ0 103 aa12.38□□□□□ -0.43
GM2A-202ENST00000523004 ARHGAP23Q9P227 1491 aa12.37□□□□□ -0.43
GM2A-202ENST00000523004 LRRC7Q96NW7 1537 aa12.37□□□□□ -0.43
GM2A-202ENST00000523004 DAPK1P53355 1430 aa12.37□□□□□ -0.43
GM2A-202ENST00000523004 SCAF11Q99590 1463 aaKnown RBP12.36□□□□□ -0.43
GM2A-202ENST00000523004 APLP2Q06481 763 aa12.36□□□□□ -0.43
GM2A-202ENST00000523004 SLIT1O75093 1534 aa12.36□□□□□ -0.43
GM2A-202ENST00000523004 FGD6Q6ZV73 1430 aa12.36□□□□□ -0.43
GM2A-202ENST00000523004 LTKP29376 864 aa12.35□□□□□ -0.43
GM2A-202ENST00000523004 SYNMO15061 1565 aa12.35□□□□□ -0.43
GM2A-202ENST00000523004 TXNDC2Q86VQ3 553 aa12.34□□□□□ -0.43
GM2A-202ENST00000523004 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.34□□□□□ -0.43
GM2A-202ENST00000523004 MED1Q15648 1581 aaPredicted RBP12.34□□□□□ -0.43
GM2A-202ENST00000523004 KANK1Q14678 1352 aa12.33□□□□□ -0.44
GM2A-202ENST00000523004 LMTK2Q8IWU2 1503 aa12.32□□□□□ -0.44
GM2A-202ENST00000523004 ANKRD30AQ9BXX3 1397 aa12.32□□□□□ -0.44
GM2A-202ENST00000523004 CHIC2Q9UKJ5 165 aa12.32□□□□□ -0.44
GM2A-202ENST00000523004 EID1Q9Y6B2 187 aa12.32□□□□□ -0.44
GM2A-202ENST00000523004 PIK3C2BO00750 1634 aa12.32□□□□□ -0.44
GM2A-202ENST00000523004 KDM5AP29375 1690 aaKnown RBP12.31□□□□□ -0.44
GM2A-202ENST00000523004 TMEM2Q9UHN6 1383 aa12.3□□□□□ -0.44
GM2A-202ENST00000523004 IDI1Q13907 227 aa12.3□□□□□ -0.44
GM2A-202ENST00000523004 XIRP1Q702N8 1843 aaKnown RBP12.3□□□□□ -0.44
GM2A-202ENST00000523004 NOS1P29475 1434 aa12.28□□□□□ -0.44
GM2A-202ENST00000523004 ADGRL2O95490 1459 aa12.28□□□□□ -0.44
GM2A-202ENST00000523004 EFCAB6Q5THR3 1501 aa12.28□□□□□ -0.44
GM2A-202ENST00000523004 STAG3Q9UJ98 1225 aa12.28□□□□□ -0.44
GM2A-202ENST00000523004 TET3O43151 1660 aa12.26□□□□□ -0.45
GM2A-202ENST00000523004 KCNA6P17658 529 aa12.25□□□□□ -0.45
GM2A-202ENST00000523004 SLC52A1Q9NWF4 448 aa12.25□□□□□ -0.45
GM2A-202ENST00000523004 ADGRB3O60242 1522 aa12.24□□□□□ -0.45
GM2A-202ENST00000523004 FAM50AQ14320 339 aaKnown RBP12.24□□□□□ -0.45
GM2A-202ENST00000523004 RPRD2Q5VT52 1461 aaKnown RBP12.24□□□□□ -0.45
GM2A-202ENST00000523004 ANKRD50Q9ULJ7 1429 aa12.23□□□□□ -0.45
GM2A-202ENST00000523004 TMEM94Q12767 1356 aa12.23□□□□□ -0.45
GM2A-202ENST00000523004 SLC26A8Q96RN1 970 aa12.23□□□□□ -0.45
GM2A-202ENST00000523004 FAM135BQ49AJ0 1406 aa12.22□□□□□ -0.45
GM2A-202ENST00000523004 PROSER2Q86WR7 435 aaPredicted RBP12.2□□□□□ -0.46
GM2A-202ENST00000523004 MYO5BQ9ULV0 1848 aa12.2□□□□□ -0.46
GM2A-202ENST00000523004 ZFYVE9O95405 1425 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms