RNA–Protein interactions for RNA: ENST00000522926.1

TNIP1-216, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 3

Gene TNIP1, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-216ENST00000522926 NEURL4Q96JN8 1562 aa29.63■■■□□ 2.33
TNIP1-216ENST00000522926 KIF3BO15066 747 aa29.62■■■□□ 2.33
TNIP1-216ENST00000522926 TNRQ92752 1358 aa29.62■■■□□ 2.33
TNIP1-216ENST00000522926 PZPP20742 1482 aa29.57■■■□□ 2.32
TNIP1-216ENST00000522926 CCDC141Q6ZP82 1450 aa29.56■■■□□ 2.32
TNIP1-216ENST00000522926 HSPA1LP34931 641 aa29.56■■■□□ 2.32
TNIP1-216ENST00000522926 KDM5DQ9BY66 1539 aa29.55■■■□□ 2.32
TNIP1-216ENST00000522926 CAMSAP2Q08AD1 1489 aa29.55■■■□□ 2.32
TNIP1-216ENST00000522926 PIP4K2BP78356 416 aa29.54■■■□□ 2.32
TNIP1-216ENST00000522926 POLR1AO95602 1720 aaPredicted RBP29.54■■■□□ 2.32
TNIP1-216ENST00000522926 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.53■■■□□ 2.32
TNIP1-216ENST00000522926 NCOA2Q15596 1464 aa29.53■■■□□ 2.32
TNIP1-216ENST00000522926 SHANK2Q9UPX8 1470 aa29.53■■■□□ 2.32
TNIP1-216ENST00000522926 SCAF1Q9H7N4 1312 aaKnown RBP29.52■■■□□ 2.32
TNIP1-216ENST00000522926 WASHC2CQ9Y4E1 1318 aa29.51■■■□□ 2.32
TNIP1-216ENST00000522926 CPS1P31327 1500 aa29.5■■■□□ 2.31
TNIP1-216ENST00000522926 MIA2Q96PC5 1412 aa29.49■■■□□ 2.31
TNIP1-216ENST00000522926 VWDEQ8N2E2 1590 aa29.48■■■□□ 2.31
TNIP1-216ENST00000522926 FAM135AQ9P2D6 1515 aa29.47■■■□□ 2.31
TNIP1-216ENST00000522926 ANKLE2Q86XL3 938 aa29.46■■■□□ 2.31
TNIP1-216ENST00000522926 MED1Q15648 1581 aaPredicted RBP29.44■■■□□ 2.3
TNIP1-216ENST00000522926 TOM1O60784 492 aa29.44■■■□□ 2.3
TNIP1-216ENST00000522926 ALKQ9UM73 1620 aa29.44■■■□□ 2.3
TNIP1-216ENST00000522926 UGGT1Q9NYU2 1555 aa29.43■■■□□ 2.3
TNIP1-216ENST00000522926 NLRP1Q9C000 1473 aa29.42■■■□□ 2.3
TNIP1-216ENST00000522926 RSPH4AQ5TD94 716 aa29.42■■■□□ 2.3
TNIP1-216ENST00000522926 THEMISQ8N1K5 641 aaPredicted RBP29.42■■■□□ 2.3
TNIP1-216ENST00000522926 NPHP4O75161 1426 aaPredicted RBP29.42■■■□□ 2.3
TNIP1-216ENST00000522926 MED14O60244 1454 aa29.41■■■□□ 2.3
TNIP1-216ENST00000522926 ARHGEF5Q12774 1597 aa29.4■■■□□ 2.3
TNIP1-216ENST00000522926 DEPDC5O75140 1603 aa29.37■■■□□ 2.29
TNIP1-216ENST00000522926 ABCC3O15438 1527 aa29.35■■■□□ 2.29
TNIP1-216ENST00000522926 TSPY4P0CV99 314 aa29.35■■■□□ 2.29
TNIP1-216ENST00000522926 TSPY10P0CW01 314 aa29.35■■■□□ 2.29
TNIP1-216ENST00000522926 RNF17Q9BXT8 1623 aaKnown RBP29.33■■■□□ 2.29
TNIP1-216ENST00000522926 STRCP1A6NGW2 1772 aa29.32■■■□□ 2.28
TNIP1-216ENST00000522926 IQGAP1P46940 1657 aa29.31■■■□□ 2.28
TNIP1-216ENST00000522926 ERVK-7P63135 1459 aa29.29■■■□□ 2.28
TNIP1-216ENST00000522926 LRRC7Q96NW7 1537 aa29.29■■■□□ 2.28
TNIP1-216ENST00000522926 MROH1Q8NDA8 1641 aa29.28■■■□□ 2.28
TNIP1-216ENST00000522926 SENP3Q9H4L4 574 aaPredicted RBP29.27■■■□□ 2.28
TNIP1-216ENST00000522926 LRRC9Q6ZRR7 1453 aa29.27■■■□□ 2.28
TNIP1-216ENST00000522926 MAST1Q9Y2H9 1570 aa29.26■■■□□ 2.28
TNIP1-216ENST00000522926 ZC3H13Q5T200 1668 aaKnown RBP29.23■■■□□ 2.27
TNIP1-216ENST00000522926 KANK4Q5T7N3 995 aaPredicted RBP29.22■■■□□ 2.27
TNIP1-216ENST00000522926 EIF2AK4Q9P2K8 1649 aaKnown RBP29.2■■■□□ 2.26
TNIP1-216ENST00000522926 CEP152O94986 1710 aa29.19■■■□□ 2.26
TNIP1-216ENST00000522926 UBR1Q8IWV7 1749 aa29.18■■■□□ 2.26
TNIP1-216ENST00000522926 LTKP29376 864 aa29.18■■■□□ 2.26
TNIP1-216ENST00000522926 VPS8Q8N3P4 1428 aa29.18■■■□□ 2.26
TNIP1-216ENST00000522926 PHF23Q9BUL5 403 aaPredicted RBP29.17■■■□□ 2.26
TNIP1-216ENST00000522926 SYNMO15061 1565 aa29.16■■■□□ 2.26
TNIP1-216ENST00000522926 CFAP65Q6ZU64 1925 aaKnown RBP29.16■■■□□ 2.26
TNIP1-216ENST00000522926 SCAF11Q99590 1463 aaKnown RBP29.15■■■□□ 2.26
TNIP1-216ENST00000522926 MYOM3Q5VTT5 1437 aa29.13■■■□□ 2.25
TNIP1-216ENST00000522926 ARHGAP23Q9P227 1491 aa29.13■■■□□ 2.25
TNIP1-216ENST00000522926 DUOX2Q9NRD8 1548 aa29.11■■■□□ 2.25
TNIP1-216ENST00000522926 LOC105371045A0A1W2PR82 267 aa29.1■■■□□ 2.25
TNIP1-216ENST00000522926 SLIT1O75093 1534 aa29.1■■■□□ 2.25
TNIP1-216ENST00000522926 TXNDC2Q86VQ3 553 aa29.09■■■□□ 2.25
TNIP1-216ENST00000522926 ARHGAP31Q2M1Z3 1444 aa29.07■■■□□ 2.24
TNIP1-216ENST00000522926 KIF15Q9NS87 1388 aa29.07■■■□□ 2.24
TNIP1-216ENST00000522926 PRDM15P57071 1507 aaPredicted RBP29.06■■■□□ 2.24
TNIP1-216ENST00000522926 RGS17Q9UGC6 210 aaPredicted RBP29.05■■■□□ 2.24
TNIP1-216ENST00000522926 XIRP1Q702N8 1843 aaKnown RBP29.04■■■□□ 2.24
TNIP1-216ENST00000522926 RRP7BPQ9NSQ0 103 aa29.04■■■□□ 2.24
TNIP1-216ENST00000522926 MAP3K1Q13233 1512 aa29.04■■■□□ 2.24
TNIP1-216ENST00000522926 ABCC5O15440 1437 aa29.03■■■□□ 2.24
TNIP1-216ENST00000522926 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.01■■■□□ 2.234e-9■□□□□ 9.6
TNIP1-216ENST00000522926 PIK3C2BO00750 1634 aa29.01■■■□□ 2.23
TNIP1-216ENST00000522926 ERBINQ96RT1 1412 aa29■■■□□ 2.23
TNIP1-216ENST00000522926 TMEM2Q9UHN6 1383 aa28.99■■■□□ 2.23
TNIP1-216ENST00000522926 EID1Q9Y6B2 187 aa28.97■■■□□ 2.23
TNIP1-216ENST00000522926 CROCC2H7BZ55 1655 aa28.96■■■□□ 2.23
TNIP1-216ENST00000522926 IDI1Q13907 227 aa28.93■■■□□ 2.22
TNIP1-216ENST00000522926 TMEM94Q12767 1356 aa28.92■■■□□ 2.22
TNIP1-216ENST00000522926 PTPN23Q9H3S7 1636 aa28.92■■■□□ 2.22
TNIP1-216ENST00000522926 RBM33Q96EV2 1170 aaKnown RBP28.92■■■□□ 2.22
TNIP1-216ENST00000522926 DAPK1P53355 1430 aa28.92■■■□□ 2.22
TNIP1-216ENST00000522926 FAM135BQ49AJ0 1406 aa28.91■■■□□ 2.22
TNIP1-216ENST00000522926 EFCAB6Q5THR3 1501 aa28.89■■■□□ 2.22
TNIP1-216ENST00000522926 SLC26A8Q96RN1 970 aa28.89■■■□□ 2.22
TNIP1-216ENST00000522926 STAG3Q9UJ98 1225 aa28.89■■■□□ 2.22
TNIP1-216ENST00000522926 CHIC2Q9UKJ5 165 aa28.88■■■□□ 2.21
TNIP1-216ENST00000522926 TET3O43151 1660 aa28.87■■■□□ 2.21
TNIP1-216ENST00000522926 LMTK2Q8IWU2 1503 aa28.87■■■□□ 2.21
TNIP1-216ENST00000522926 KCNA6P17658 529 aa28.86■■■□□ 2.21
TNIP1-216ENST00000522926 KANK1Q14678 1352 aa28.86■■■□□ 2.21
TNIP1-216ENST00000522926 POTEAQ6S8J7 498 aa28.84■■■□□ 2.21
TNIP1-216ENST00000522926 FGD6Q6ZV73 1430 aa28.84■■■□□ 2.21
TNIP1-216ENST00000522926 NOS1P29475 1434 aa28.83■■■□□ 2.21
TNIP1-216ENST00000522926 KDM5AP29375 1690 aaKnown RBP28.83■■■□□ 2.21
TNIP1-216ENST00000522926 PROSER2Q86WR7 435 aaPredicted RBP28.81■■■□□ 2.2
TNIP1-216ENST00000522926 ROBO1Q9Y6N7 1651 aa28.8■■■□□ 2.2
TNIP1-216ENST00000522926 ANKRD30AQ9BXX3 1397 aa28.78■■■□□ 2.2
TNIP1-216ENST00000522926 ADGRB3O60242 1522 aa28.78■■■□□ 2.2
TNIP1-216ENST00000522926 NWD1Q149M9 1564 aa28.75■■■□□ 2.19
TNIP1-216ENST00000522926 NKTRP30414 1462 aaKnown RBP28.73■■■□□ 2.19
TNIP1-216ENST00000522926 SLC52A1Q9NWF4 448 aa28.7■■■□□ 2.18
TNIP1-216ENST00000522926 ZFYVE9O95405 1425 aa28.69■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms