RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 TEX14Q8IWB6 1497 aa22.38■■□□□ 1.17
CTNNA1-236ENST00000522792 MLH3Q9UHC1 1453 aa22.38■■□□□ 1.17
CTNNA1-236ENST00000522792 TONSLQ96HA7 1378 aa22.36■■□□□ 1.17
CTNNA1-236ENST00000522792 MAGI2Q86UL8 1455 aa22.35■■□□□ 1.17
CTNNA1-236ENST00000522792 DHX29Q7Z478 1369 aaKnown RBP22.35■■□□□ 1.17
CTNNA1-236ENST00000522792 IQGAP3Q86VI3 1631 aa22.34■■□□□ 1.17
CTNNA1-236ENST00000522792 FRMPD1Q5SYB0 1578 aa22.34■■□□□ 1.17
CTNNA1-236ENST00000522792 TIMELESSQ9UNS1 1208 aa22.34■■□□□ 1.17
CTNNA1-236ENST00000522792 ABCA6Q8N139 1617 aa22.33■■□□□ 1.17
CTNNA1-236ENST00000522792 A2MP01023 1474 aa22.33■■□□□ 1.16
CTNNA1-236ENST00000522792 EIF2AK4Q9P2K8 1649 aaKnown RBP22.31■■□□□ 1.16
CTNNA1-236ENST00000522792 KIF3BO15066 747 aa22.31■■□□□ 1.16
CTNNA1-236ENST00000522792 DEPDC5O75140 1603 aa22.3■■□□□ 1.16
CTNNA1-236ENST00000522792 DNAJC5Q9H3Z4 198 aa22.29■■□□□ 1.16
CTNNA1-236ENST00000522792 RPRD2Q5VT52 1461 aaKnown RBP22.28■■□□□ 1.16
CTNNA1-236ENST00000522792 DIP2CQ9Y2E4 1556 aa22.27■■□□□ 1.16
CTNNA1-236ENST00000522792 YEATS2Q9ULM3 1422 aa22.26■■□□□ 1.15
CTNNA1-236ENST00000522792 PPP1R15AO75807 674 aaPredicted RBP22.26■■□□□ 1.15
CTNNA1-236ENST00000522792 ZMYM4Q5VZL5 1548 aa22.25■■□□□ 1.15
CTNNA1-236ENST00000522792 MROH1Q8NDA8 1641 aa22.24■■□□□ 1.15
CTNNA1-236ENST00000522792 PRDM15P57071 1507 aaPredicted RBP22.23■■□□□ 1.15
CTNNA1-236ENST00000522792 KANK1Q14678 1352 aa22.22■■□□□ 1.15
CTNNA1-236ENST00000522792 ZNF316A6NFI3 1004 aaPredicted RBP22.21■■□□□ 1.15
CTNNA1-236ENST00000522792 COL17A1Q9UMD9 1497 aaPredicted RBP22.21■■□□□ 1.15
CTNNA1-236ENST00000522792 VWDEQ8N2E2 1590 aa22.2■■□□□ 1.14
CTNNA1-236ENST00000522792 RNF17Q9BXT8 1623 aaKnown RBP22.2■■□□□ 1.14
CTNNA1-236ENST00000522792 L3MBTL2Q969R5 705 aa22.19■■□□□ 1.14
CTNNA1-236ENST00000522792 E9PCH4 1651 aa22.18■■□□□ 1.14
CTNNA1-236ENST00000522792 TRHP20396 242 aaPredicted RBP22.18■■□□□ 1.14
CTNNA1-236ENST00000522792 TET3O43151 1660 aa22.17■■□□□ 1.14
CTNNA1-236ENST00000522792 GGT6Q6P531 493 aa22.16■■□□□ 1.14
CTNNA1-236ENST00000522792 PLA2R1Q13018 1463 aa22.16■■□□□ 1.14
CTNNA1-236ENST00000522792 BCORL1Q5H9F3 1711 aa22.16■■□□□ 1.14
CTNNA1-236ENST00000522792 CCDC144AA2RUR9 1427 aa22.13■■□□□ 1.13
CTNNA1-236ENST00000522792 CEP152O94986 1710 aa22.13■■□□□ 1.13
CTNNA1-236ENST00000522792 ATP10AO60312 1499 aa22.11■■□□□ 1.13
CTNNA1-236ENST00000522792 EFCAB6Q5THR3 1501 aa22.09■■□□□ 1.13
CTNNA1-236ENST00000522792 LMTK2Q8IWU2 1503 aa22.08■■□□□ 1.13
CTNNA1-236ENST00000522792 SPHKAPQ2M3C7 1700 aa22.07■■□□□ 1.12
CTNNA1-236ENST00000522792 ARHGEF40Q8TER5 1519 aa22.06■■□□□ 1.12
CTNNA1-236ENST00000522792 ABCC3O15438 1527 aa22.06■■□□□ 1.12
CTNNA1-236ENST00000522792 WASHC2CQ9Y4E1 1318 aa22.05■■□□□ 1.12
CTNNA1-236ENST00000522792 TRPM2O94759 1503 aa22.05■■□□□ 1.12
CTNNA1-236ENST00000522792 REREQ9P2R6 1566 aa22.04■■□□□ 1.12
CTNNA1-236ENST00000522792 PTPRTO14522 1441 aa22.04■■□□□ 1.12
CTNNA1-236ENST00000522792 NBPF8Q3BBV2 869 aa22.04■■□□□ 1.12
CTNNA1-236ENST00000522792 SIGLEC1Q9BZZ2 1709 aa22.03■■□□□ 1.12
CTNNA1-236ENST00000522792 CLTCL1P53675 1640 aa22.01■■□□□ 1.11
CTNNA1-236ENST00000522792 CAMSAP1Q5T5Y3 1602 aa22.01■■□□□ 1.11
CTNNA1-236ENST00000522792 RGL3Q3MIN7 710 aa22.01■■□□□ 1.11
CTNNA1-236ENST00000522792 ZNF326Q5BKZ1 582 aaKnown RBP22.01■■□□□ 1.11
CTNNA1-236ENST00000522792 AGLP35573 1532 aa21.99■■□□□ 1.11
CTNNA1-236ENST00000522792 NPATQ14207 1427 aa21.99■■□□□ 1.11
CTNNA1-236ENST00000522792 DCAF11Q8TEB1 546 aa21.99■■□□□ 1.11
CTNNA1-236ENST00000522792 KDM2AQ9Y2K7 1162 aa21.99■■□□□ 1.11
CTNNA1-236ENST00000522792 ZC3H13Q5T200 1668 aaKnown RBP21.98■■□□□ 1.11
CTNNA1-236ENST00000522792 HIRIP3Q9BW71 556 aaPredicted RBP21.97■■□□□ 1.11
CTNNA1-236ENST00000522792 UGGT1Q9NYU2 1555 aa21.97■■□□□ 1.11
CTNNA1-236ENST00000522792 DIEXFQ68CQ4 756 aaKnown RBP21.97■■□□□ 1.11
CTNNA1-236ENST00000522792 MLECQ14165 292 aa21.94■■□□□ 1.1
CTNNA1-236ENST00000522792 SPATA31E1Q6ZUB1 1445 aa21.94■■□□□ 1.1
CTNNA1-236ENST00000522792 CFAP65Q6ZU64 1925 aaKnown RBP21.94■■□□□ 1.1
CTNNA1-236ENST00000522792 UHRF1BP1Q6BDS2 1440 aa21.93■■□□□ 1.1
CTNNA1-236ENST00000522792 ARHGAP31Q2M1Z3 1444 aa21.89■■□□□ 1.09
CTNNA1-236ENST00000522792 CNTLNQ9NXG0 1405 aa21.88■■□□□ 1.09
CTNNA1-236ENST00000522792 CLTCQ00610 1675 aaKnown RBP21.88■■□□□ 1.09
CTNNA1-236ENST00000522792 ARID4BQ4LE39 1312 aaPredicted RBP21.88■■□□□ 1.09
CTNNA1-236ENST00000522792 HSPA5P11021 654 aaKnown RBP21.87■■□□□ 1.09
CTNNA1-236ENST00000522792 NOS1P29475 1434 aa21.86■■□□□ 1.09
CTNNA1-236ENST00000522792 KIF1BO60333 1816 aa21.86■■□□□ 1.09
CTNNA1-236ENST00000522792 PRAG1Q86YV5 1406 aa21.86■■□□□ 1.09
CTNNA1-236ENST00000522792 RALGAPBQ86X10 1494 aa21.86■■□□□ 1.09
CTNNA1-236ENST00000522792 EIF4G2P78344 907 aaKnown RBP eCLIP21.85■■□□□ 1.09
CTNNA1-236ENST00000522792 SYNMO15061 1565 aa21.85■■□□□ 1.09
CTNNA1-236ENST00000522792 MROH2AA6NES4 1674 aa21.85■■□□□ 1.09
CTNNA1-236ENST00000522792 PPP6R1Q9UPN7 881 aa21.84■■□□□ 1.09
CTNNA1-236ENST00000522792 PREX1Q8TCU6 1659 aa21.83■■□□□ 1.09
CTNNA1-236ENST00000522792 CHGAP10645 457 aaKnown RBP21.83■■□□□ 1.09
CTNNA1-236ENST00000522792 TRPM1Q7Z4N2 1603 aa21.81■■□□□ 1.08
CTNNA1-236ENST00000522792 NEURL4Q96JN8 1562 aa21.81■■□□□ 1.08
CTNNA1-236ENST00000522792 FBXO31Q5XUX0 539 aaPredicted RBP21.8■■□□□ 1.08
CTNNA1-236ENST00000522792 ADGRB3O60242 1522 aa21.8■■□□□ 1.08
CTNNA1-236ENST00000522792 PIK3C2BO00750 1634 aa21.8■■□□□ 1.08
CTNNA1-236ENST00000522792 ESF1Q9H501 851 aaKnown RBP21.79■■□□□ 1.08
CTNNA1-236ENST00000522792 CARD11Q9BXL7 1154 aa21.78■■□□□ 1.08
CTNNA1-236ENST00000522792 ROCK2O75116 1388 aaKnown RBP21.78■■□□□ 1.08
CTNNA1-236ENST00000522792 MADDQ8WXG6 1647 aa21.77■■□□□ 1.08
CTNNA1-236ENST00000522792 ERVK-7P63135 1459 aa21.77■■□□□ 1.08
CTNNA1-236ENST00000522792 USP47Q96K76 1375 aa21.76■■□□□ 1.07
CTNNA1-236ENST00000522792 IFT172Q9UG01 1749 aa21.74■■□□□ 1.07
CTNNA1-236ENST00000522792 IDI1Q13907 227 aa21.74■■□□□ 1.07
CTNNA1-236ENST00000522792 NBPF1Q3BBV0 1214 aa21.74■■□□□ 1.07
CTNNA1-236ENST00000522792 ZMYM3Q14202 1370 aa21.72■■□□□ 1.07
CTNNA1-236ENST00000522792 SLC52A1Q9NWF4 448 aa21.72■■□□□ 1.07
CTNNA1-236ENST00000522792 MYOM2P54296 1465 aa21.71■■□□□ 1.07
CTNNA1-236ENST00000522792 DDX10Q13206 875 aaKnown RBP21.71■■□□□ 1.07
CTNNA1-236ENST00000522792 STAC3Q96MF2 364 aa21.7■■□□□ 1.06
CTNNA1-236ENST00000522792 SPATA31D1Q6ZQQ2 1576 aa21.7■■□□□ 1.06
CTNNA1-236ENST00000522792 ADGRF5Q8IZF2 1346 aa21.69■■□□□ 1.06
CTNNA1-236ENST00000522792 PPLO60437 1756 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms