RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 CHIC2Q9UKJ5 165 aa25.22■■□□□ 1.63
PABPC1-221ENST00000522720 EIF2AK4Q9P2K8 1649 aaKnown RBP25.21■■□□□ 1.63
PABPC1-221ENST00000522720 ANKRD30AQ9BXX3 1397 aa25.2■■□□□ 1.63
PABPC1-221ENST00000522720 FAM135AQ9P2D6 1515 aa25.2■■□□□ 1.62
PABPC1-221ENST00000522720 NPATQ14207 1427 aa25.2■■□□□ 1.62
PABPC1-221ENST00000522720 WASHC2CQ9Y4E1 1318 aa25.19■■□□□ 1.62
PABPC1-221ENST00000522720 HSPA2P54652 639 aa25.19■■□□□ 1.62
PABPC1-221ENST00000522720 NCOA1Q15788 1441 aa25.19■■□□□ 1.62
PABPC1-221ENST00000522720 RNF17Q9BXT8 1623 aaKnown RBP25.19■■□□□ 1.62
PABPC1-221ENST00000522720 UHRF1BP1Q6BDS2 1440 aa25.18■■□□□ 1.62
PABPC1-221ENST00000522720 KDM5DQ9BY66 1539 aa25.17■■□□□ 1.62
PABPC1-221ENST00000522720 PTPRKQ15262 1439 aa25.16■■□□□ 1.62
PABPC1-221ENST00000522720 ERBINQ96RT1 1412 aa25.16■■□□□ 1.62
PABPC1-221ENST00000522720 ADGRL2O95490 1459 aa25.15■■□□□ 1.62
PABPC1-221ENST00000522720 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.13■■□□□ 1.619e-8■□□□□ 8.7
PABPC1-221ENST00000522720 MROH1Q8NDA8 1641 aa25.11■■□□□ 1.61
PABPC1-221ENST00000522720 ABCC3O15438 1527 aa25.08■■□□□ 1.61
PABPC1-221ENST00000522720 PZPP20742 1482 aa25.08■■□□□ 1.6
PABPC1-221ENST00000522720 ZC3H13Q5T200 1668 aaKnown RBP25.07■■□□□ 1.6
PABPC1-221ENST00000522720 FBXO31Q5XUX0 539 aaPredicted RBP25.06■■□□□ 1.6
PABPC1-221ENST00000522720 PRDM15P57071 1507 aaPredicted RBP25.05■■□□□ 1.6
PABPC1-221ENST00000522720 RRBP1Q9P2E9 1410 aaKnown RBP25.04■■□□□ 1.6
PABPC1-221ENST00000522720 DEPDC5O75140 1603 aa25.04■■□□□ 1.6
PABPC1-221ENST00000522720 ROCK1Q13464 1354 aa25.04■■□□□ 1.6
PABPC1-221ENST00000522720 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.03■■□□□ 1.6
PABPC1-221ENST00000522720 ANKRD50Q9ULJ7 1429 aa25.03■■□□□ 1.6
PABPC1-221ENST00000522720 ITGAEP38570 1179 aa25.02■■□□□ 1.6
PABPC1-221ENST00000522720 MYO3AQ8NEV4 1616 aa25.01■■□□□ 1.59
PABPC1-221ENST00000522720 CEP152O94986 1710 aa25.01■■□□□ 1.59
PABPC1-221ENST00000522720 TNRQ92752 1358 aa25.01■■□□□ 1.59
PABPC1-221ENST00000522720 KANK1Q14678 1352 aa25■■□□□ 1.59
PABPC1-221ENST00000522720 STRCQ7RTU9 1775 aa24.98■■□□□ 1.59
PABPC1-221ENST00000522720 ZNF142P52746 1687 aaPredicted RBP24.98■■□□□ 1.59
PABPC1-221ENST00000522720 CAMSAP1Q5T5Y3 1602 aa24.98■■□□□ 1.59
PABPC1-221ENST00000522720 CEP170BQ9Y4F5 1589 aaPredicted RBP24.97■■□□□ 1.59
PABPC1-221ENST00000522720 CFAP65Q6ZU64 1925 aaKnown RBP24.96■■□□□ 1.59
PABPC1-221ENST00000522720 VWDEQ8N2E2 1590 aa24.95■■□□□ 1.58
PABPC1-221ENST00000522720 A2ML1A8K2U0 1454 aa24.95■■□□□ 1.58
PABPC1-221ENST00000522720 ARHGAP31Q2M1Z3 1444 aa24.95■■□□□ 1.58
PABPC1-221ENST00000522720 DMRT2Q9Y5R5 561 aa24.94■■□□□ 1.58
PABPC1-221ENST00000522720 SPATA31D1Q6ZQQ2 1576 aa24.93■■□□□ 1.58
PABPC1-221ENST00000522720 LMTK2Q8IWU2 1503 aa24.92■■□□□ 1.58
PABPC1-221ENST00000522720 ERVK-7P63135 1459 aa24.92■■□□□ 1.58
PABPC1-221ENST00000522720 NLRP1Q9C000 1473 aa24.91■■□□□ 1.58
PABPC1-221ENST00000522720 PLA2R1Q13018 1463 aa24.88■■□□□ 1.57
PABPC1-221ENST00000522720 PTPRTO14522 1441 aa24.86■■□□□ 1.57
PABPC1-221ENST00000522720 UNC13BO14795 1591 aa24.85■■□□□ 1.57
PABPC1-221ENST00000522720 PKD2Q13563 968 aa24.85■■□□□ 1.57
PABPC1-221ENST00000522720 NCKAP5LQ9HCH0 1330 aa24.85■■□□□ 1.57
PABPC1-221ENST00000522720 THEMISQ8N1K5 641 aaPredicted RBP24.84■■□□□ 1.57
PABPC1-221ENST00000522720 EFCAB6Q5THR3 1501 aa24.83■■□□□ 1.57
PABPC1-221ENST00000522720 UGGT1Q9NYU2 1555 aa24.82■■□□□ 1.56
PABPC1-221ENST00000522720 TET3O43151 1660 aa24.78■■□□□ 1.56
PABPC1-221ENST00000522720 NAIPQ13075 1403 aa24.78■■□□□ 1.56
PABPC1-221ENST00000522720 NUP155O75694 1391 aa24.78■■□□□ 1.56
PABPC1-221ENST00000522720 RPRD2Q5VT52 1461 aaKnown RBP24.77■■□□□ 1.56
PABPC1-221ENST00000522720 NOS1P29475 1434 aa24.77■■□□□ 1.56
PABPC1-221ENST00000522720 IQGAP3Q86VI3 1631 aa24.76■■□□□ 1.55
PABPC1-221ENST00000522720 GCC2Q8IWJ2 1684 aa24.75■■□□□ 1.55
PABPC1-221ENST00000522720 ANKLE2Q86XL3 938 aa24.75■■□□□ 1.55
PABPC1-221ENST00000522720 UBR1Q8IWV7 1749 aa24.73■■□□□ 1.55
PABPC1-221ENST00000522720 HFM1A2PYH4 1435 aa24.73■■□□□ 1.55
PABPC1-221ENST00000522720 IDI1Q13907 227 aa24.73■■□□□ 1.55
PABPC1-221ENST00000522720 SYNMO15061 1565 aa24.72■■□□□ 1.55
PABPC1-221ENST00000522720 POLR1AO95602 1720 aaPredicted RBP24.72■■□□□ 1.55
PABPC1-221ENST00000522720 SLC52A1Q9NWF4 448 aa24.7■■□□□ 1.54
PABPC1-221ENST00000522720 E9PCH4 1651 aa24.69■■□□□ 1.54
PABPC1-221ENST00000522720 PIK3C2BO00750 1634 aa24.69■■□□□ 1.54
PABPC1-221ENST00000522720 NEURL4Q96JN8 1562 aa24.68■■□□□ 1.54
PABPC1-221ENST00000522720 CERKQ8TCT0 537 aa24.68■■□□□ 1.54
PABPC1-221ENST00000522720 STAG3Q9UJ98 1225 aa24.67■■□□□ 1.54
PABPC1-221ENST00000522720 KDM5AP29375 1690 aaKnown RBP24.66■■□□□ 1.54
PABPC1-221ENST00000522720 ILDR1Q86SU0 546 aaPredicted RBP24.66■■□□□ 1.54
PABPC1-221ENST00000522720 MED14O60244 1454 aa24.65■■□□□ 1.54
PABPC1-221ENST00000522720 ARHGAP23Q9P227 1491 aa24.64■■□□□ 1.54
PABPC1-221ENST00000522720 SLIT1O75093 1534 aa24.64■■□□□ 1.53
PABPC1-221ENST00000522720 NPHP4O75161 1426 aaPredicted RBP24.62■■□□□ 1.53
PABPC1-221ENST00000522720 LTBP4Q8N2S1 1624 aa24.62■■□□□ 1.53
PABPC1-221ENST00000522720 TMEM2Q9UHN6 1383 aa24.62■■□□□ 1.53
PABPC1-221ENST00000522720 LTKP29376 864 aa24.61■■□□□ 1.53
PABPC1-221ENST00000522720 TXNDC2Q86VQ3 553 aa24.61■■□□□ 1.53
PABPC1-221ENST00000522720 FBXO41Q8TF61 875 aa24.61■■□□□ 1.53
PABPC1-221ENST00000522720 ZNF335Q9H4Z2 1342 aaPredicted RBP24.61■■□□□ 1.53
PABPC1-221ENST00000522720 SCAF11Q99590 1463 aaKnown RBP24.6■■□□□ 1.53
PABPC1-221ENST00000522720 TRIM52Q96A61 297 aa24.59■■□□□ 1.53
PABPC1-221ENST00000522720 EID1Q9Y6B2 187 aa24.59■■□□□ 1.53
PABPC1-221ENST00000522720 ADGRB3O60242 1522 aa24.59■■□□□ 1.53
PABPC1-221ENST00000522720 IQGAP1P46940 1657 aa24.57■■□□□ 1.52
PABPC1-221ENST00000522720 TMEM131LA2VDJ0 1609 aa24.53■■□□□ 1.52
PABPC1-221ENST00000522720 MYO5BQ9ULV0 1848 aa24.53■■□□□ 1.52
PABPC1-221ENST00000522720 SPHKAPQ2M3C7 1700 aa24.52■■□□□ 1.52
PABPC1-221ENST00000522720 SLC4A1APQ9BWU0 796 aaKnown RBP24.51■■□□□ 1.51
PABPC1-221ENST00000522720 CHGAP10645 457 aaKnown RBP24.5■■□□□ 1.51
PABPC1-221ENST00000522720 HDGFP51858 240 aaKnown RBP24.48■■□□□ 1.51
PABPC1-221ENST00000522720 IQSEC2Q5JU85 1478 aa24.48■■□□□ 1.51
PABPC1-221ENST00000522720 SETD5Q9C0A6 1442 aa24.48■■□□□ 1.51
PABPC1-221ENST00000522720 ZFYVE9O95405 1425 aa24.47■■□□□ 1.51
PABPC1-221ENST00000522720 ACIN1Q9UKV3 1341 aaKnown RBP24.47■■□□□ 1.51
PABPC1-221ENST00000522720 RIMS2Q9UQ26 1411 aa24.45■■□□□ 1.51
PABPC1-221ENST00000522720 TRPM2O94759 1503 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms