RNA–Protein interactions for RNA: ENST00000522665.5

NDRG1-223, Transcript of N-myc downstream regulated 1, humanhuman

TSL 2

Gene NDRG1, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-223ENST00000522665 DEPDC5O75140 1603 aa22.2■■□□□ 1.14
NDRG1-223ENST00000522665 BCORL1Q5H9F3 1711 aa22.2■■□□□ 1.14
NDRG1-223ENST00000522665 ATP10AO60312 1499 aa22.18■■□□□ 1.14
NDRG1-223ENST00000522665 NUP155O75694 1391 aa22.18■■□□□ 1.14
NDRG1-223ENST00000522665 PZPP20742 1482 aa22.17■■□□□ 1.14
NDRG1-223ENST00000522665 RNF17Q9BXT8 1623 aaKnown RBP22.17■■□□□ 1.14
NDRG1-223ENST00000522665 IQGAP3Q86VI3 1631 aa22.16■■□□□ 1.14
NDRG1-223ENST00000522665 PRDM15P57071 1507 aaPredicted RBP22.16■■□□□ 1.14
NDRG1-223ENST00000522665 MPHOSPH9Q99550 1183 aa22.14■■□□□ 1.13
NDRG1-223ENST00000522665 FAM135AQ9P2D6 1515 aa22.14■■□□□ 1.13
NDRG1-223ENST00000522665 KANK1Q14678 1352 aa22.13■■□□□ 1.13
NDRG1-223ENST00000522665 KIF3BO15066 747 aa22.13■■□□□ 1.13
NDRG1-223ENST00000522665 ZEB1P37275 1124 aaPredicted RBP22.13■■□□□ 1.13
NDRG1-223ENST00000522665 SLC4A1APQ9BWU0 796 aaKnown RBP22.13■■□□□ 1.13
NDRG1-223ENST00000522665 AGLP35573 1532 aa22.11■■□□□ 1.13
NDRG1-223ENST00000522665 MROH1Q8NDA8 1641 aa22.11■■□□□ 1.13
NDRG1-223ENST00000522665 VWDEQ8N2E2 1590 aa22.1■■□□□ 1.13
NDRG1-223ENST00000522665 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.09■■□□□ 1.13
NDRG1-223ENST00000522665 TET3O43151 1660 aa22.04■■□□□ 1.12
NDRG1-223ENST00000522665 LMTK2Q8IWU2 1503 aa22.04■■□□□ 1.12
NDRG1-223ENST00000522665 PKD2Q13563 968 aa22.03■■□□□ 1.12
NDRG1-223ENST00000522665 ZC3H13Q5T200 1668 aaKnown RBP22.02■■□□□ 1.12
NDRG1-223ENST00000522665 GGT6Q6P531 493 aa21.99■■□□□ 1.11
NDRG1-223ENST00000522665 ABCC3O15438 1527 aa21.99■■□□□ 1.11
NDRG1-223ENST00000522665 EFCAB6Q5THR3 1501 aa21.99■■□□□ 1.11
NDRG1-223ENST00000522665 ANKRD30BQ9BXX2 1392 aa21.98■■□□□ 1.11
NDRG1-223ENST00000522665 CEP152O94986 1710 aa21.97■■□□□ 1.11
NDRG1-223ENST00000522665 SIGLEC1Q9BZZ2 1709 aa21.97■■□□□ 1.11
NDRG1-223ENST00000522665 PPP6R1Q9UPN7 881 aa21.96■■□□□ 1.11
NDRG1-223ENST00000522665 FOXD1Q16676 465 aa21.95■■□□□ 1.1
NDRG1-223ENST00000522665 E9PCH4 1651 aa21.95■■□□□ 1.1
NDRG1-223ENST00000522665 WASHC2CQ9Y4E1 1318 aa21.94■■□□□ 1.1
NDRG1-223ENST00000522665 RPRD2Q5VT52 1461 aaKnown RBP21.94■■□□□ 1.1
NDRG1-223ENST00000522665 CAMSAP1Q5T5Y3 1602 aa21.93■■□□□ 1.1
NDRG1-223ENST00000522665 ARID4BQ4LE39 1312 aaPredicted RBP21.91■■□□□ 1.1
NDRG1-223ENST00000522665 SIN3AQ96ST3 1273 aa21.89■■□□□ 1.09
NDRG1-223ENST00000522665 TIMELESSQ9UNS1 1208 aa21.89■■□□□ 1.09
NDRG1-223ENST00000522665 ARHGAP31Q2M1Z3 1444 aa21.89■■□□□ 1.09
NDRG1-223ENST00000522665 NEUROD1Q13562 356 aa21.88■■□□□ 1.09
NDRG1-223ENST00000522665 TRPM2O94759 1503 aa21.88■■□□□ 1.09
NDRG1-223ENST00000522665 SPHKAPQ2M3C7 1700 aa21.88■■□□□ 1.09
NDRG1-223ENST00000522665 CCDC144AA2RUR9 1427 aa21.87■■□□□ 1.09
NDRG1-223ENST00000522665 PTPRTO14522 1441 aa21.87■■□□□ 1.09
NDRG1-223ENST00000522665 NPATQ14207 1427 aa21.86■■□□□ 1.09
NDRG1-223ENST00000522665 TONSLQ96HA7 1378 aa21.86■■□□□ 1.09
NDRG1-223ENST00000522665 PLA2R1Q13018 1463 aa21.84■■□□□ 1.09
NDRG1-223ENST00000522665 CNTLNQ9NXG0 1405 aa21.84■■□□□ 1.09
NDRG1-223ENST00000522665 CLTCQ00610 1675 aaKnown RBP21.84■■□□□ 1.09
NDRG1-223ENST00000522665 MLECQ14165 292 aa21.83■■□□□ 1.09
NDRG1-223ENST00000522665 ESF1Q9H501 851 aaKnown RBP21.83■■□□□ 1.09
NDRG1-223ENST00000522665 MROH2AA6NES4 1674 aa21.79■■□□□ 1.08
NDRG1-223ENST00000522665 NOS1P29475 1434 aa21.77■■□□□ 1.08
NDRG1-223ENST00000522665 CLTCL1P53675 1640 aa21.77■■□□□ 1.07
NDRG1-223ENST00000522665 PREX1Q8TCU6 1659 aa21.76■■□□□ 1.07
NDRG1-223ENST00000522665 FER1L4A9Z1Z3 1794 aa21.75■■□□□ 1.07
NDRG1-223ENST00000522665 ERVK-7P63135 1459 aa21.74■■□□□ 1.07
NDRG1-223ENST00000522665 NEURL4Q96JN8 1562 aa21.73■■□□□ 1.07
NDRG1-223ENST00000522665 SYNMO15061 1565 aa21.72■■□□□ 1.07
NDRG1-223ENST00000522665 SPATA31D1Q6ZQQ2 1576 aa21.71■■□□□ 1.07
NDRG1-223ENST00000522665 ZMYM3Q14202 1370 aa21.71■■□□□ 1.07
NDRG1-223ENST00000522665 PIK3C2BO00750 1634 aa21.69■■□□□ 1.06
NDRG1-223ENST00000522665 UGGT1Q9NYU2 1555 aa21.69■■□□□ 1.06
NDRG1-223ENST00000522665 L3MBTL2Q969R5 705 aa21.68■■□□□ 1.06
NDRG1-223ENST00000522665 KIF1BO60333 1816 aa21.67■■□□□ 1.06
NDRG1-223ENST00000522665 SPATA31E1Q6ZUB1 1445 aa21.67■■□□□ 1.06
NDRG1-223ENST00000522665 ADAMTSL3P82987 1691 aa21.66■■□□□ 1.06
NDRG1-223ENST00000522665 SLC52A1Q9NWF4 448 aa21.66■■□□□ 1.06
NDRG1-223ENST00000522665 MADDQ8WXG6 1647 aa21.66■■□□□ 1.06
NDRG1-223ENST00000522665 ADGRB3O60242 1522 aa21.65■■□□□ 1.06
NDRG1-223ENST00000522665 CFAP65Q6ZU64 1925 aaKnown RBP21.65■■□□□ 1.06
NDRG1-223ENST00000522665 PPP1R15AO75807 674 aaPredicted RBP21.65■■□□□ 1.06
NDRG1-223ENST00000522665 C3P01024 1663 aa21.63■■□□□ 1.05
NDRG1-223ENST00000522665 FBXO31Q5XUX0 539 aaPredicted RBP21.62■■□□□ 1.05
NDRG1-223ENST00000522665 RIMS1Q86UR5 1692 aaKnown RBP21.62■■□□□ 1.05
NDRG1-223ENST00000522665 TNRQ92752 1358 aa21.61■■□□□ 1.05
NDRG1-223ENST00000522665 UHRF1BP1Q6BDS2 1440 aa21.58■■□□□ 1.05
NDRG1-223ENST00000522665 RGL3Q3MIN7 710 aa21.58■■□□□ 1.05
NDRG1-223ENST00000522665 STAC3Q96MF2 364 aa21.58■■□□□ 1.05
NDRG1-223ENST00000522665 IDI1Q13907 227 aa21.56■■□□□ 1.04
NDRG1-223ENST00000522665 DCAF11Q8TEB1 546 aa21.56■■□□□ 1.04
NDRG1-223ENST00000522665 TMEM131LA2VDJ0 1609 aa21.55■■□□□ 1.04
NDRG1-223ENST00000522665 CHGAP10645 457 aaKnown RBP21.55■■□□□ 1.04
NDRG1-223ENST00000522665 NLRP1Q9C000 1473 aa21.55■■□□□ 1.04
NDRG1-223ENST00000522665 MYOM2P54296 1465 aa21.54■■□□□ 1.04
NDRG1-223ENST00000522665 IFT172Q9UG01 1749 aa21.53■■□□□ 1.04
NDRG1-223ENST00000522665 KDM5AP29375 1690 aaKnown RBP21.53■■□□□ 1.04
NDRG1-223ENST00000522665 RPGRIP1LQ68CZ1 1315 aa21.53■■□□□ 1.04
NDRG1-223ENST00000522665 ZNF326Q5BKZ1 582 aaKnown RBP21.52■■□□□ 1.04
NDRG1-223ENST00000522665 PRAG1Q86YV5 1406 aa21.52■■□□□ 1.04
NDRG1-223ENST00000522665 CEBPAP49715 358 aaPredicted RBP21.5■■□□□ 1.03
NDRG1-223ENST00000522665 KDM2AQ9Y2K7 1162 aa21.5■■□□□ 1.03
NDRG1-223ENST00000522665 PPLO60437 1756 aa21.49■■□□□ 1.03
NDRG1-223ENST00000522665 STAG3Q9UJ98 1225 aa21.49■■□□□ 1.03
NDRG1-223ENST00000522665 RALGAPBQ86X10 1494 aa21.49■■□□□ 1.03
NDRG1-223ENST00000522665 NEXMIFQ5QGS0 1516 aa21.48■■□□□ 1.03
NDRG1-223ENST00000522665 MYO3AQ8NEV4 1616 aa21.47■■□□□ 1.03
NDRG1-223ENST00000522665 A2ML1A8K2U0 1454 aa21.47■■□□□ 1.03
NDRG1-223ENST00000522665 NBPF8Q3BBV2 869 aa21.47■■□□□ 1.03
NDRG1-223ENST00000522665 PTPRMP28827 1452 aa21.46■■□□□ 1.03
NDRG1-223ENST00000522665 MYO5BQ9ULV0 1848 aa21.45■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms