RNA–Protein interactions for RNA: ENST00000522638.1

IGKV3D-34-201, Transcript of immunoglobulin kappa variable 3D-34 (pseudogene), humanhuman

BASIC

Gene IGKV3D-34, Length 302 nt, Biotype IG V pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-34-201ENST00000522638 CLIP1P30622 1438 aa10.19□□□□□ -0.78
IGKV3D-34-201ENST00000522638 FAM135BQ49AJ0 1406 aa10.19□□□□□ -0.78
IGKV3D-34-201ENST00000522638 TNRQ92752 1358 aa10.19□□□□□ -0.78
IGKV3D-34-201ENST00000522638 RANGAP1P46060 587 aaPredicted RBP10.18□□□□□ -0.78
IGKV3D-34-201ENST00000522638 PHLPP1O60346 1717 aa10.18□□□□□ -0.78
IGKV3D-34-201ENST00000522638 FAM135AQ9P2D6 1515 aa10.17□□□□□ -0.78
IGKV3D-34-201ENST00000522638 NLRP1Q9C000 1473 aa10.17□□□□□ -0.78
IGKV3D-34-201ENST00000522638 ANKLE2Q86XL3 938 aa10.16□□□□□ -0.78
IGKV3D-34-201ENST00000522638 KDM5DQ9BY66 1539 aa10.16□□□□□ -0.78
IGKV3D-34-201ENST00000522638 UBR1Q8IWV7 1749 aa10.16□□□□□ -0.78
IGKV3D-34-201ENST00000522638 FMN1Q68DA7 1419 aa10.15□□□□□ -0.79
IGKV3D-34-201ENST00000522638 LRP6O75581 1613 aa10.15□□□□□ -0.79
IGKV3D-34-201ENST00000522638 COL16A1Q07092 1604 aaPredicted RBP10.15□□□□□ -0.79
IGKV3D-34-201ENST00000522638 MAP3K1Q13233 1512 aa10.14□□□□□ -0.79
IGKV3D-34-201ENST00000522638 CDK11AQ9UQ88 783 aaPredicted RBP10.14□□□□□ -0.79
IGKV3D-34-201ENST00000522638 SPAG9O60271 1321 aaKnown RBP10.13□□□□□ -0.79
IGKV3D-34-201ENST00000522638 FBXO31Q5XUX0 539 aaPredicted RBP10.13□□□□□ -0.79
IGKV3D-34-201ENST00000522638 GGT6Q6P531 493 aa10.13□□□□□ -0.79
IGKV3D-34-201ENST00000522638 CDK12Q9NYV4 1490 aaPredicted RBP10.12□□□□□ -0.79
IGKV3D-34-201ENST00000522638 CSRNP3Q8WYN3 585 aa10.12□□□□□ -0.79
IGKV3D-34-201ENST00000522638 ARHGAP35Q9NRY4 1499 aa10.11□□□□□ -0.79
IGKV3D-34-201ENST00000522638 MIA2Q96PC5 1412 aa10.11□□□□□ -0.79
IGKV3D-34-201ENST00000522638 THEMISQ8N1K5 641 aaPredicted RBP10.11□□□□□ -0.79
IGKV3D-34-201ENST00000522638 SHPRHQ149N8 1683 aa10.11□□□□□ -0.79
IGKV3D-34-201ENST00000522638 LRRC9Q6ZRR7 1453 aa10.1□□□□□ -0.79
IGKV3D-34-201ENST00000522638 KIAA1107Q9UPP5 1409 aa10.1□□□□□ -0.79
IGKV3D-34-201ENST00000522638 GPATCH8Q9UKJ3 1502 aaKnown RBP10.09□□□□□ -0.79
IGKV3D-34-201ENST00000522638 SETBP1Q9Y6X0 1596 aa10.09□□□□□ -0.79
IGKV3D-34-201ENST00000522638 TRIM52Q96A61 297 aa10.08□□□□□ -0.8
IGKV3D-34-201ENST00000522638 JCADQ9P266 1359 aa10.08□□□□□ -0.8
IGKV3D-34-201ENST00000522638 PLEKHH2Q8IVE3 1493 aa10.08□□□□□ -0.8
IGKV3D-34-201ENST00000522638 SCAF11Q99590 1463 aaKnown RBP10.08□□□□□ -0.8
IGKV3D-34-201ENST00000522638 ARHGAP23Q9P227 1491 aa10.08□□□□□ -0.8
IGKV3D-34-201ENST00000522638 TIAM1Q13009 1591 aa10.08□□□□□ -0.8
IGKV3D-34-201ENST00000522638 SLIT1O75093 1534 aa10.07□□□□□ -0.8
IGKV3D-34-201ENST00000522638 CCDC18Q5T9S5 1454 aa10.07□□□□□ -0.8
IGKV3D-34-201ENST00000522638 NWD1Q149M9 1564 aa10.06□□□□□ -0.8
IGKV3D-34-201ENST00000522638 NCOA2Q15596 1464 aa10.06□□□□□ -0.8
IGKV3D-34-201ENST00000522638 CFAP65Q6ZU64 1925 aaKnown RBP10.06□□□□□ -0.8
IGKV3D-34-201ENST00000522638 HNRNPMP52272 730 aaKnown RBP eCLIP10.06□□□□□ -0.8
IGKV3D-34-201ENST00000522638 ATP1B4Q9UN42 357 aaPredicted RBP10.06□□□□□ -0.8
IGKV3D-34-201ENST00000522638 TMEM94Q12767 1356 aa10.04□□□□□ -0.8
IGKV3D-34-201ENST00000522638 KDM5AP29375 1690 aaKnown RBP10.04□□□□□ -0.8
IGKV3D-34-201ENST00000522638 EP400Q96L91 3159 aa10.04□□□□□ -0.8
IGKV3D-34-201ENST00000522638 RGS12O14924 1447 aa10.04□□□□□ -0.8
IGKV3D-34-201ENST00000522638 EEA1Q15075 1411 aa10.04□□□□□ -0.8
IGKV3D-34-201ENST00000522638 ERVK-7P63135 1459 aa10.04□□□□□ -0.8
IGKV3D-34-201ENST00000522638 DHX29Q7Z478 1369 aaKnown RBP10.03□□□□□ -0.8
IGKV3D-34-201ENST00000522638 RTEL1-TNFRSF6BF6WH68 1400 aa10.03□□□□□ -0.8
IGKV3D-34-201ENST00000522638 CEP152O94986 1710 aa10.03□□□□□ -0.8
IGKV3D-34-201ENST00000522638 DIP2AQ14689 1571 aa10.03□□□□□ -0.8
IGKV3D-34-201ENST00000522638 ZNF772Q68DY9 489 aaPredicted RBP10.03□□□□□ -0.8
IGKV3D-34-201ENST00000522638 FGD6Q6ZV73 1430 aa10.03□□□□□ -0.8
IGKV3D-34-201ENST00000522638 AHDC1Q5TGY3 1603 aaPredicted RBP10.03□□□□□ -0.8
IGKV3D-34-201ENST00000522638 CAMSAP2Q08AD1 1489 aa10.03□□□□□ -0.8
IGKV3D-34-201ENST00000522638 MBD5Q9P267 1494 aa10.03□□□□□ -0.8
IGKV3D-34-201ENST00000522638 ABCC3O15438 1527 aa10.02□□□□□ -0.8
IGKV3D-34-201ENST00000522638 PRDM15P57071 1507 aaPredicted RBP10.02□□□□□ -0.8
IGKV3D-34-201ENST00000522638 ZNF777Q9ULD5 760 aaPredicted RBP10.02□□□□□ -0.81
IGKV3D-34-201ENST00000522638 LRP5O75197 1615 aa10.02□□□□□ -0.81
IGKV3D-34-201ENST00000522638 MROH1Q8NDA8 1641 aa10.01□□□□□ -0.81
IGKV3D-34-201ENST00000522638 NKTRP30414 1462 aaKnown RBP10.01□□□□□ -0.81
IGKV3D-34-201ENST00000522638 SPATA31A6Q5VVP1 1343 aa10.01□□□□□ -0.81
IGKV3D-34-201ENST00000522638 CASKIN1Q8WXD9 1431 aa10□□□□□ -0.81
IGKV3D-34-201ENST00000522638 TET3O43151 1660 aa10□□□□□ -0.81
IGKV3D-34-201ENST00000522638 RXRBP28702 533 aa10□□□□□ -0.81
IGKV3D-34-201ENST00000522638 LTKP29376 864 aa10□□□□□ -0.81
IGKV3D-34-201ENST00000522638 PIK3C2BO00750 1634 aa10□□□□□ -0.81
IGKV3D-34-201ENST00000522638 CHD2O14647 1828 aaKnown RBP9.98□□□□□ -0.81
IGKV3D-34-201ENST00000522638 WASHC2CQ9Y4E1 1318 aa9.98□□□□□ -0.81
IGKV3D-34-201ENST00000522638 KIF3BO15066 747 aa9.97□□□□□ -0.81
IGKV3D-34-201ENST00000522638 EIF2AK4Q9P2K8 1649 aaKnown RBP9.96□□□□□ -0.81
IGKV3D-34-201ENST00000522638 FYCO1Q9BQS8 1478 aa9.96□□□□□ -0.82
IGKV3D-34-201ENST00000522638 MEX3CQ5U5Q3 659 aaKnown RBP9.95□□□□□ -0.82
IGKV3D-34-201ENST00000522638 MAST1Q9Y2H9 1570 aa9.95□□□□□ -0.82
IGKV3D-34-201ENST00000522638 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.95□□□□□ -0.82
IGKV3D-34-201ENST00000522638 NHSL1Q5SYE7 1610 aa9.94□□□□□ -0.82
IGKV3D-34-201ENST00000522638 KCNA6P17658 529 aa9.94□□□□□ -0.82
IGKV3D-34-201ENST00000522638 RBM33Q96EV2 1170 aaKnown RBP9.94□□□□□ -0.82
IGKV3D-34-201ENST00000522638 CFDP1Q9UEE9 299 aaPredicted RBP9.94□□□□□ -0.82
IGKV3D-34-201ENST00000522638 CCDC141Q6ZP82 1450 aa9.93□□□□□ -0.82
IGKV3D-34-201ENST00000522638 MSH6P52701 1360 aa9.93□□□□□ -0.82
IGKV3D-34-201ENST00000522638 ZNF644Q9H582 1327 aaPredicted RBP9.93□□□□□ -0.82
IGKV3D-34-201ENST00000522638 TXNDC2Q86VQ3 553 aa9.93□□□□□ -0.82
IGKV3D-34-201ENST00000522638 SLAIN2Q9P270 581 aa9.93□□□□□ -0.82
IGKV3D-34-201ENST00000522638 ZRANB1Q9UGI0 708 aa9.93□□□□□ -0.82
IGKV3D-34-201ENST00000522638 CCNB3Q8WWL7 1395 aa9.92□□□□□ -0.82
IGKV3D-34-201ENST00000522638 AFF2P51816 1311 aa9.92□□□□□ -0.82
IGKV3D-34-201ENST00000522638 ATAD2Q6PL18 1390 aa9.91□□□□□ -0.82
IGKV3D-34-201ENST00000522638 TMEM2Q9UHN6 1383 aa9.91□□□□□ -0.82
IGKV3D-34-201ENST00000522638 PROSER2Q86WR7 435 aaPredicted RBP9.91□□□□□ -0.82
IGKV3D-34-201ENST00000522638 ARHGEF5Q12774 1597 aa9.9□□□□□ -0.82
IGKV3D-34-201ENST00000522638 EFCAB6Q5THR3 1501 aa9.9□□□□□ -0.82
IGKV3D-34-201ENST00000522638 MYO5BQ9ULV0 1848 aa9.89□□□□□ -0.83
IGKV3D-34-201ENST00000522638 RBM6P78332 1123 aaKnown RBP9.89□□□□□ -0.83
IGKV3D-34-201ENST00000522638 NUTM2BA6NNL0 878 aaPredicted RBP9.88□□□□□ -0.83
IGKV3D-34-201ENST00000522638 NUTM2EB1AL46 878 aaPredicted RBP9.88□□□□□ -0.83
IGKV3D-34-201ENST00000522638 NUTM2DQ5VT03 806 aaPredicted RBP9.88□□□□□ -0.83
IGKV3D-34-201ENST00000522638 NUTM2AQ8IVF1 878 aaPredicted RBP9.88□□□□□ -0.83
IGKV3D-34-201ENST00000522638 ARHGAP31Q2M1Z3 1444 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms