RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 ERBINQ96RT1 1412 aa18.26■□□□□ 0.51
PABPC1-219ENST00000522387 ARHGEF40Q8TER5 1519 aa18.26■□□□□ 0.51
PABPC1-219ENST00000522387 SLC4A1APQ9BWU0 796 aaKnown RBP18.25■□□□□ 0.51
PABPC1-219ENST00000522387 PLPPR3Q6T4P5 718 aa18.24■□□□□ 0.51
PABPC1-219ENST00000522387 MPHOSPH9Q99550 1183 aa18.22■□□□□ 0.51
PABPC1-219ENST00000522387 WASHC2CQ9Y4E1 1318 aa18.21■□□□□ 0.5
PABPC1-219ENST00000522387 DHX57Q6P158 1386 aaKnown RBP18.19■□□□□ 0.5
PABPC1-219ENST00000522387 PKD2Q13563 968 aa18.18■□□□□ 0.5
PABPC1-219ENST00000522387 ESF1Q9H501 851 aaKnown RBP18.15■□□□□ 0.5
PABPC1-219ENST00000522387 PZPP20742 1482 aa18.15■□□□□ 0.5
PABPC1-219ENST00000522387 KANK1Q14678 1352 aa18.15■□□□□ 0.5
PABPC1-219ENST00000522387 EIF2AK4Q9P2K8 1649 aaKnown RBP18.14■□□□□ 0.5
PABPC1-219ENST00000522387 FAM135AQ9P2D6 1515 aa18.14■□□□□ 0.49
PABPC1-219ENST00000522387 MROH1Q8NDA8 1641 aa18.14■□□□□ 0.49
PABPC1-219ENST00000522387 CFAP65Q6ZU64 1925 aaKnown RBP18.14■□□□□ 0.49
PABPC1-219ENST00000522387 UNC13BO14795 1591 aa18.13■□□□□ 0.49
PABPC1-219ENST00000522387 NEUROD1Q13562 356 aa18.12■□□□□ 0.49
PABPC1-219ENST00000522387 SIN3AQ96ST3 1273 aa18.11■□□□□ 0.49
PABPC1-219ENST00000522387 DEPDC5O75140 1603 aa18.11■□□□□ 0.49
PABPC1-219ENST00000522387 CEP152O94986 1710 aa18.11■□□□□ 0.49
PABPC1-219ENST00000522387 REREQ9P2R6 1566 aa18.1■□□□□ 0.49
PABPC1-219ENST00000522387 CEBPAP49715 358 aaPredicted RBP18.1■□□□□ 0.49
PABPC1-219ENST00000522387 AGLP35573 1532 aa18.1■□□□□ 0.49
PABPC1-219ENST00000522387 PRDM15P57071 1507 aaPredicted RBP18.1■□□□□ 0.49
PABPC1-219ENST00000522387 RNF17Q9BXT8 1623 aaKnown RBP18.09■□□□□ 0.49
PABPC1-219ENST00000522387 ZEB1P37275 1124 aaPredicted RBP18.08■□□□□ 0.48
PABPC1-219ENST00000522387 FBXO31Q5XUX0 539 aaPredicted RBP18.07■□□□□ 0.48
PABPC1-219ENST00000522387 IQGAP3Q86VI3 1631 aa18.07■□□□□ 0.48
PABPC1-219ENST00000522387 ABCC3O15438 1527 aa18.06■□□□□ 0.48
PABPC1-219ENST00000522387 CLTCQ00610 1675 aaKnown RBP18.05■□□□□ 0.48
PABPC1-219ENST00000522387 BCORL1Q5H9F3 1711 aa18.05■□□□□ 0.48
PABPC1-219ENST00000522387 KDM5DQ9BY66 1539 aa18.05■□□□□ 0.48
PABPC1-219ENST00000522387 VWDEQ8N2E2 1590 aa18.03■□□□□ 0.48
PABPC1-219ENST00000522387 NPATQ14207 1427 aa18.02■□□□□ 0.48
PABPC1-219ENST00000522387 E9PCH4 1651 aa18.02■□□□□ 0.48
PABPC1-219ENST00000522387 ZMYM3Q14202 1370 aa18.02■□□□□ 0.47
PABPC1-219ENST00000522387 ACIN1Q9UKV3 1341 aaKnown RBP18■□□□□ 0.47
PABPC1-219ENST00000522387 TET3O43151 1660 aa18■□□□□ 0.47
PABPC1-219ENST00000522387 CAMSAP1Q5T5Y3 1602 aa17.99■□□□□ 0.47
PABPC1-219ENST00000522387 EFCAB6Q5THR3 1501 aa17.99■□□□□ 0.47
PABPC1-219ENST00000522387 ANKRD30BQ9BXX2 1392 aa17.99■□□□□ 0.47
PABPC1-219ENST00000522387 MADDQ8WXG6 1647 aa17.99■□□□□ 0.47
PABPC1-219ENST00000522387 FER1L4A9Z1Z3 1794 aa17.98■□□□□ 0.47
PABPC1-219ENST00000522387 PPP6R1Q9UPN7 881 aa17.98■□□□□ 0.47
PABPC1-219ENST00000522387 CHGAP10645 457 aaKnown RBP17.98■□□□□ 0.47
PABPC1-219ENST00000522387 RGL3Q3MIN7 710 aa17.97■□□□□ 0.47
PABPC1-219ENST00000522387 UGGT1Q9NYU2 1555 aa17.97■□□□□ 0.47
PABPC1-219ENST00000522387 PLA2R1Q13018 1463 aa17.96■□□□□ 0.47
PABPC1-219ENST00000522387 LMTK2Q8IWU2 1503 aa17.95■□□□□ 0.46
PABPC1-219ENST00000522387 RIMS1Q86UR5 1692 aaKnown RBP17.95■□□□□ 0.46
PABPC1-219ENST00000522387 SENP3Q9H4L4 574 aaPredicted RBP17.94■□□□□ 0.46
PABPC1-219ENST00000522387 ZC3H13Q5T200 1668 aaKnown RBP17.94■□□□□ 0.46
PABPC1-219ENST00000522387 KDM4FA0A1W2PPD8 638 aa17.94■□□□□ 0.46
PABPC1-219ENST00000522387 CCDC144AA2RUR9 1427 aa17.93■□□□□ 0.46
PABPC1-219ENST00000522387 IDI1Q13907 227 aa17.91■□□□□ 0.46
PABPC1-219ENST00000522387 CNTLNQ9NXG0 1405 aa17.9■□□□□ 0.46
PABPC1-219ENST00000522387 ADAMTSL3P82987 1691 aa17.9■□□□□ 0.46
PABPC1-219ENST00000522387 SPHKAPQ2M3C7 1700 aa17.9■□□□□ 0.46
PABPC1-219ENST00000522387 C3P01024 1663 aa17.89■□□□□ 0.45
PABPC1-219ENST00000522387 RPRD2Q5VT52 1461 aaKnown RBP17.89■□□□□ 0.45
PABPC1-219ENST00000522387 ARHGAP31Q2M1Z3 1444 aa17.88■□□□□ 0.45
PABPC1-219ENST00000522387 CLSPNQ9HAW4 1339 aa17.88■□□□□ 0.45
PABPC1-219ENST00000522387 NUTM2DQ5VT03 806 aaPredicted RBP17.88■□□□□ 0.45
PABPC1-219ENST00000522387 KDM2AQ9Y2K7 1162 aa17.88■□□□□ 0.45
PABPC1-219ENST00000522387 PREX1Q8TCU6 1659 aa17.88■□□□□ 0.45
PABPC1-219ENST00000522387 STAG3Q9UJ98 1225 aa17.88■□□□□ 0.45
PABPC1-219ENST00000522387 ERVK-7P63135 1459 aa17.88■□□□□ 0.45
PABPC1-219ENST00000522387 PTPRTO14522 1441 aa17.87■□□□□ 0.45
PABPC1-219ENST00000522387 ZNF326Q5BKZ1 582 aaKnown RBP17.87■□□□□ 0.45
PABPC1-219ENST00000522387 SYNMO15061 1565 aa17.86■□□□□ 0.45
PABPC1-219ENST00000522387 NOS1P29475 1434 aa17.86■□□□□ 0.45
PABPC1-219ENST00000522387 TONSLQ96HA7 1378 aa17.86■□□□□ 0.45
PABPC1-219ENST00000522387 TRPM2O94759 1503 aa17.85■□□□□ 0.45
PABPC1-219ENST00000522387 CLTCL1P53675 1640 aa17.85■□□□□ 0.45
PABPC1-219ENST00000522387 PTPRMP28827 1452 aa17.85■□□□□ 0.45
PABPC1-219ENST00000522387 L3MBTL2Q969R5 705 aa17.85■□□□□ 0.45
PABPC1-219ENST00000522387 TNRQ92752 1358 aa17.84■□□□□ 0.45
PABPC1-219ENST00000522387 DCAF11Q8TEB1 546 aa17.83■□□□□ 0.45
PABPC1-219ENST00000522387 MROH2AA6NES4 1674 aa17.83■□□□□ 0.44
PABPC1-219ENST00000522387 SLC52A1Q9NWF4 448 aa17.82■□□□□ 0.44
PABPC1-219ENST00000522387 SPATA31D1Q6ZQQ2 1576 aa17.81■□□□□ 0.44
PABPC1-219ENST00000522387 PIK3C2BO00750 1634 aa17.76■□□□□ 0.43
PABPC1-219ENST00000522387 MYO5BQ9ULV0 1848 aa17.76■□□□□ 0.43
PABPC1-219ENST00000522387 KIF1BO60333 1816 aa17.75■□□□□ 0.43
PABPC1-219ENST00000522387 SPATA31E1Q6ZUB1 1445 aa17.75■□□□□ 0.43
PABPC1-219ENST00000522387 PPP1R15AO75807 674 aaPredicted RBP17.71■□□□□ 0.43
PABPC1-219ENST00000522387 HSPA2P54652 639 aa17.71■□□□□ 0.43
PABPC1-219ENST00000522387 NBPF8Q3BBV2 869 aa17.71■□□□□ 0.43
PABPC1-219ENST00000522387 TMEM131LA2VDJ0 1609 aa17.71■□□□□ 0.42
PABPC1-219ENST00000522387 ADGRF5Q8IZF2 1346 aa17.7■□□□□ 0.42
PABPC1-219ENST00000522387 MYO3AQ8NEV4 1616 aa17.7■□□□□ 0.42
PABPC1-219ENST00000522387 A2ML1A8K2U0 1454 aa17.7■□□□□ 0.42
PABPC1-219ENST00000522387 ADGRB3O60242 1522 aa17.69■□□□□ 0.42
PABPC1-219ENST00000522387 BCANQ96GW7 911 aa17.69■□□□□ 0.42
PABPC1-219ENST00000522387 SETD1BQ9UPS6 1966 aaKnown RBP17.69■□□□□ 0.42
PABPC1-219ENST00000522387 NLRP1Q9C000 1473 aa17.68■□□□□ 0.42
PABPC1-219ENST00000522387 UHRF1BP1Q6BDS2 1440 aa17.67■□□□□ 0.42
PABPC1-219ENST00000522387 LTKP29376 864 aa17.66■□□□□ 0.42
PABPC1-219ENST00000522387 THEMISQ8N1K5 641 aaPredicted RBP17.66■□□□□ 0.42
PABPC1-219ENST00000522387 UBR1Q8IWV7 1749 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms