RNA–Protein interactions for RNA: ENST00000522052.5

CTNNA1-233, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-233ENST00000522052 REPIN1Q9BWE0 567 aaKnown RBP9.5□□□□□ -0.89
CTNNA1-233ENST00000522052 CLCN1P35523 988 aa9.49□□□□□ -0.89
CTNNA1-233ENST00000522052 PCMTD1Q96MG8 357 aaPredicted RBP9.49□□□□□ -0.89
CTNNA1-233ENST00000522052 ONECUT3O60422 494 aaPredicted RBP9.47□□□□□ -0.89
CTNNA1-233ENST00000522052 TYW1BQ6NUM6 668 aa9.47□□□□□ -0.89
CTNNA1-233ENST00000522052 SLAIN1Q8ND83 568 aa9.47□□□□□ -0.89
CTNNA1-233ENST00000522052 RBM33Q96EV2 1170 aaKnown RBP9.47□□□□□ -0.89
CTNNA1-233ENST00000522052 GPCPD1Q9NPB8 672 aa9.47□□□□□ -0.89
CTNNA1-233ENST00000522052 PCDHGA10Q9Y5H3 936 aa9.47□□□□□ -0.89
CTNNA1-233ENST00000522052 SH3D19Q5HYK7 790 aa9.46□□□□□ -0.9
CTNNA1-233ENST00000522052 METRNQ9UJH8 293 aa9.46□□□□□ -0.9
CTNNA1-233ENST00000522052 MDM2Q00987 491 aaPredicted RBP9.45□□□□□ -0.9
CTNNA1-233ENST00000522052 TSR1Q2NL82 804 aaKnown RBP9.45□□□□□ -0.9
CTNNA1-233ENST00000522052 PCDHGA4Q9Y5G9 962 aa9.45□□□□□ -0.9
CTNNA1-233ENST00000522052 FBXW7Q969H0 707 aa9.44□□□□□ -0.9
CTNNA1-233ENST00000522052 PHOX2BQ99453 314 aa9.44□□□□□ -0.9
CTNNA1-233ENST00000522052 UBTFP17480 764 aaKnown RBP9.43□□□□□ -0.9
CTNNA1-233ENST00000522052 SSTR3P32745 418 aaPredicted RBP9.42□□□□□ -0.9
CTNNA1-233ENST00000522052 JPH4Q96JJ6 628 aa9.42□□□□□ -0.9
CTNNA1-233ENST00000522052 KDM4FA0A1W2PPD8 638 aa9.41□□□□□ -0.9
CTNNA1-233ENST00000522052 SKIV2LQ15477 1246 aaKnown RBP9.41□□□□□ -0.9
CTNNA1-233ENST00000522052 LHX8Q68G74 356 aa9.41□□□□□ -0.9
CTNNA1-233ENST00000522052 CERKQ8TCT0 537 aa9.41□□□□□ -0.9
CTNNA1-233ENST00000522052 C1orf115Q9H7X2 142 aa9.41□□□□□ -0.9
CTNNA1-233ENST00000522052 A6NJR5 290 aa9.4□□□□□ -0.9
CTNNA1-233ENST00000522052 OATP04181 439 aa9.4□□□□□ -0.9
CTNNA1-233ENST00000522052 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.4□□□□□ -0.9
CTNNA1-233ENST00000522052 METTL3Q86U44 580 aaKnown RBP9.39□□□□□ -0.91
CTNNA1-233ENST00000522052 FAM217BQ9NTX9 383 aaPredicted RBP9.39□□□□□ -0.91
CTNNA1-233ENST00000522052 BEGAINQ9BUH8 593 aa9.38□□□□□ -0.91
CTNNA1-233ENST00000522052 ARID3CA6NKF2 412 aa9.37□□□□□ -0.91
CTNNA1-233ENST00000522052 APBB1O00213 710 aa9.37□□□□□ -0.91
CTNNA1-233ENST00000522052 FOSBP53539 338 aa9.37□□□□□ -0.91
CTNNA1-233ENST00000522052 FAM161AQ3B820 660 aa9.37□□□□□ -0.91
CTNNA1-233ENST00000522052 C6orf132Q5T0Z8 1188 aa9.37□□□□□ -0.91
CTNNA1-233ENST00000522052 PADI6Q6TGC4 694 aa9.37□□□□□ -0.91
CTNNA1-233ENST00000522052 ARID3AQ99856 593 aa9.37□□□□□ -0.91
CTNNA1-233ENST00000522052 ADGRG1Q9Y653 693 aa9.37□□□□□ -0.91
CTNNA1-233ENST00000522052 POTEIP0CG38 1075 aa9.36□□□□□ -0.91
CTNNA1-233ENST00000522052 MCM6Q14566 821 aa9.36□□□□□ -0.91
CTNNA1-233ENST00000522052 PXYLP1Q8TE99 480 aa9.36□□□□□ -0.91
CTNNA1-233ENST00000522052 RBM27Q9P2N5 1060 aaKnown RBP9.36□□□□□ -0.91
CTNNA1-233ENST00000522052 TTC13Q8NBP0 860 aa9.35□□□□□ -0.91
CTNNA1-233ENST00000522052 ZDHHC16Q969W1 377 aa9.35□□□□□ -0.91
CTNNA1-233ENST00000522052 TRAK2O60296 914 aa9.34□□□□□ -0.91
CTNNA1-233ENST00000522052 CLUAP1Q96AJ1 413 aa9.34□□□□□ -0.91
CTNNA1-233ENST00000522052 PROCA1Q8NCQ7 364 aaPredicted RBP9.33□□□□□ -0.92
CTNNA1-233ENST00000522052 NLRP7Q8WX94 980 aa9.33□□□□□ -0.92
CTNNA1-233ENST00000522052 ZNF454Q8N9F8 522 aa9.32□□□□□ -0.92
CTNNA1-233ENST00000522052 MYSM1Q5VVJ2 828 aa9.31□□□□□ -0.92
CTNNA1-233ENST00000522052 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.31□□□□□ -0.92
CTNNA1-233ENST00000522052 POLR3EQ9NVU0 708 aa9.31□□□□□ -0.92
CTNNA1-233ENST00000522052 ATP1B4Q9UN42 357 aaPredicted RBP9.31□□□□□ -0.92
CTNNA1-233ENST00000522052 PRSS12P56730 875 aa9.3□□□□□ -0.92
CTNNA1-233ENST00000522052 RBM46Q8TBY0 533 aaKnown RBP9.29□□□□□ -0.92
CTNNA1-233ENST00000522052 ADAM33Q9BZ11 813 aa9.29□□□□□ -0.92
CTNNA1-233ENST00000522052 CLK2P49760 499 aaKnown RBP9.28□□□□□ -0.92
CTNNA1-233ENST00000522052 DIXDC1Q155Q3 683 aa9.28□□□□□ -0.92
CTNNA1-233ENST00000522052 TBC1D2Q9BYX2 928 aa9.28□□□□□ -0.92
CTNNA1-233ENST00000522052 NUDT7P0C024 238 aa9.27□□□□□ -0.93
CTNNA1-233ENST00000522052 DOK7Q18PE1 504 aa9.27□□□□□ -0.93
CTNNA1-233ENST00000522052 PROSER2Q86WR7 435 aaPredicted RBP9.27□□□□□ -0.93
CTNNA1-233ENST00000522052 CDCA7LQ96GN5 454 aa9.27□□□□□ -0.93
CTNNA1-233ENST00000522052 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.25□□□□□ -0.93
CTNNA1-233ENST00000522052 SPDYE5A6NIY4 337 aa9.25□□□□□ -0.93
CTNNA1-233ENST00000522052 ARSIQ5FYB1 569 aa9.25□□□□□ -0.93
CTNNA1-233ENST00000522052 CCDC82Q8N4S0 544 aa9.25□□□□□ -0.93
CTNNA1-233ENST00000522052 KHSRPQ92945 711 aaKnown RBP eCLIP9.25□□□□□ -0.93
CTNNA1-233ENST00000522052 ZSWIM6Q9HCJ5 1215 aa9.25□□□□□ -0.93
CTNNA1-233ENST00000522052 PODXL2Q9NZ53 605 aa9.25□□□□□ -0.93
CTNNA1-233ENST00000522052 RAD21O60216 631 aa9.24□□□□□ -0.93
CTNNA1-233ENST00000522052 HOXB3P14651 431 aaPredicted RBP9.24□□□□□ -0.93
CTNNA1-233ENST00000522052 FNBP4Q8N3X1 1017 aaPredicted RBP9.24□□□□□ -0.93
CTNNA1-233ENST00000522052 BANK1Q8NDB2 785 aa9.24□□□□□ -0.93
CTNNA1-233ENST00000522052 POM121Q96HA1 1249 aa9.24□□□□□ -0.93
CTNNA1-233ENST00000522052 RIMBP2O15034 1052 aa9.23□□□□□ -0.93
CTNNA1-233ENST00000522052 RFC5P40937 340 aa9.23□□□□□ -0.93
CTNNA1-233ENST00000522052 RCCD1A6NED2 376 aa9.22□□□□□ -0.93
CTNNA1-233ENST00000522052 GPR153Q6NV75 609 aa9.22□□□□□ -0.93
CTNNA1-233ENST00000522052 EYA1Q99502 592 aa9.22□□□□□ -0.93
CTNNA1-233ENST00000522052 FAM198AQ9UFP1 575 aa9.22□□□□□ -0.93
CTNNA1-233ENST00000522052 PPP2R2DQ66LE6 453 aa9.21□□□□□ -0.94
CTNNA1-233ENST00000522052 SPIRE2Q8WWL2 714 aa9.21□□□□□ -0.94
CTNNA1-233ENST00000522052 LIMD1Q9UGP4 676 aa9.21□□□□□ -0.94
CTNNA1-233ENST00000522052 ZNF777Q9ULD5 760 aaPredicted RBP9.21□□□□□ -0.94
CTNNA1-233ENST00000522052 CD46P15529 392 aa9.2□□□□□ -0.94
CTNNA1-233ENST00000522052 TRIM26Q12899 539 aaPredicted RBP9.2□□□□□ -0.94
CTNNA1-233ENST00000522052 TUSC1Q2TAM9 212 aa9.2□□□□□ -0.94
CTNNA1-233ENST00000522052 TMEM259Q4ZIN3 620 aa9.2□□□□□ -0.94
CTNNA1-233ENST00000522052 RIC3Q7Z5B4 369 aa9.2□□□□□ -0.94
CTNNA1-233ENST00000522052 COG6Q9Y2V7 657 aa9.2□□□□□ -0.94
CTNNA1-233ENST00000522052 PSDA5PKW4 1024 aaPredicted RBP9.19□□□□□ -0.94
CTNNA1-233ENST00000522052 COL9A1P20849 921 aa9.19□□□□□ -0.94
CTNNA1-233ENST00000522052 PPP4R3BQ5MIZ7 849 aa9.19□□□□□ -0.94
CTNNA1-233ENST00000522052 SULF1Q8IWU6 871 aa9.19□□□□□ -0.94
CTNNA1-233ENST00000522052 BCL2L12Q9HB09 334 aa9.19□□□□□ -0.94
CTNNA1-233ENST00000522052 SNRKQ9NRH2 765 aa9.19□□□□□ -0.94
CTNNA1-233ENST00000522052 LHX6Q9UPM6 363 aa9.19□□□□□ -0.94
CTNNA1-233ENST00000522052 SPTLC1O15269 473 aa9.18□□□□□ -0.94
CTNNA1-233ENST00000522052 FBXO31Q5XUX0 539 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms