RNA–Protein interactions for RNA: ENST00000521977.1

SHPRH-209, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5

Gene SHPRH, Length 927 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-209ENST00000521977 PLXNC1O60486 1568 aa14.13□□□□□ -0.15
SHPRH-209ENST00000521977 FAM69CQ0P6D2 419 aa14.13□□□□□ -0.15
SHPRH-209ENST00000521977 RTEL1-TNFRSF6BF6WH68 1400 aa14.13□□□□□ -0.15
SHPRH-209ENST00000521977 ACIN1Q9UKV3 1341 aaKnown RBP14.13□□□□□ -0.15
SHPRH-209ENST00000521977 KIF13AQ9H1H9 1805 aa14.12□□□□□ -0.15
SHPRH-209ENST00000521977 CLSPNQ9HAW4 1339 aa14.12□□□□□ -0.15
SHPRH-209ENST00000521977 PPRC1Q5VV67 1664 aaKnown RBP14.11□□□□□ -0.15
SHPRH-209ENST00000521977 ZEB1P37275 1124 aaPredicted RBP14.11□□□□□ -0.15
SHPRH-209ENST00000521977 KIF15Q9NS87 1388 aa14.1□□□□□ -0.15
SHPRH-209ENST00000521977 AKT1S1Q96B36 256 aa14.1□□□□□ -0.15
SHPRH-209ENST00000521977 INO80Q9ULG1 1556 aaPredicted RBP14.09□□□□□ -0.15
SHPRH-209ENST00000521977 ANKRD50Q9ULJ7 1429 aa14.09□□□□□ -0.15
SHPRH-209ENST00000521977 ZNF518AQ6AHZ1 1483 aa14.09□□□□□ -0.15
SHPRH-209ENST00000521977 ZFYVE16Q7Z3T8 1539 aa14.09□□□□□ -0.15
SHPRH-209ENST00000521977 KDM5CP41229 1560 aa14.09□□□□□ -0.15
SHPRH-209ENST00000521977 POGZQ7Z3K3 1410 aa14.08□□□□□ -0.15
SHPRH-209ENST00000521977 AFAP1Q8N556 730 aa14.08□□□□□ -0.16
SHPRH-209ENST00000521977 SPAG9O60271 1321 aaKnown RBP14.08□□□□□ -0.16
SHPRH-209ENST00000521977 TEX14Q8IWB6 1497 aa14.07□□□□□ -0.16
SHPRH-209ENST00000521977 ATP7AQ04656 1500 aa14.06□□□□□ -0.16
SHPRH-209ENST00000521977 DUOX2Q9NRD8 1548 aa14.06□□□□□ -0.16
SHPRH-209ENST00000521977 DENND4BO75064 1496 aaPredicted RBP14.06□□□□□ -0.16
SHPRH-209ENST00000521977 MLH3Q9UHC1 1453 aa14.05□□□□□ -0.16
SHPRH-209ENST00000521977 KIDINS220Q9ULH0 1771 aa14.04□□□□□ -0.16
SHPRH-209ENST00000521977 ERBINQ96RT1 1412 aa14.04□□□□□ -0.16
SHPRH-209ENST00000521977 RICTORQ6R327 1708 aa14.04□□□□□ -0.16
SHPRH-209ENST00000521977 KDM5DQ9BY66 1539 aa14.03□□□□□ -0.16
SHPRH-209ENST00000521977 TSPOAP1O95153 1857 aa14.03□□□□□ -0.16
SHPRH-209ENST00000521977 FRMPD1Q5SYB0 1578 aa14.01□□□□□ -0.17
SHPRH-209ENST00000521977 HECW2Q9P2P5 1572 aa14.01□□□□□ -0.17
SHPRH-209ENST00000521977 CHRDL2Q6WN34 429 aa14.01□□□□□ -0.17
SHPRH-209ENST00000521977 PZPP20742 1482 aa14□□□□□ -0.17
SHPRH-209ENST00000521977 TRIM52Q96A61 297 aa14□□□□□ -0.17
SHPRH-209ENST00000521977 UNC13BO14795 1591 aa14□□□□□ -0.17
SHPRH-209ENST00000521977 MAGI2Q86UL8 1455 aa13.99□□□□□ -0.17
SHPRH-209ENST00000521977 MPHOSPH9Q99550 1183 aa13.99□□□□□ -0.17
SHPRH-209ENST00000521977 ZMYM4Q5VZL5 1548 aa13.99□□□□□ -0.17
SHPRH-209ENST00000521977 DHX29Q7Z478 1369 aaKnown RBP13.98□□□□□ -0.17
SHPRH-209ENST00000521977 RAPGEF3O95398 923 aa13.98□□□□□ -0.17
SHPRH-209ENST00000521977 EIF2AK4Q9P2K8 1649 aaKnown RBP13.97□□□□□ -0.17
SHPRH-209ENST00000521977 ABCA6Q8N139 1617 aa13.96□□□□□ -0.17
SHPRH-209ENST00000521977 A2MP01023 1474 aa13.95□□□□□ -0.18
SHPRH-209ENST00000521977 DEPDC5O75140 1603 aa13.95□□□□□ -0.18
SHPRH-209ENST00000521977 DIP2CQ9Y2E4 1556 aa13.95□□□□□ -0.18
SHPRH-209ENST00000521977 NUP155O75694 1391 aa13.95□□□□□ -0.18
SHPRH-209ENST00000521977 BCORL1Q5H9F3 1711 aa13.94□□□□□ -0.18
SHPRH-209ENST00000521977 IQGAP3Q86VI3 1631 aa13.93□□□□□ -0.18
SHPRH-209ENST00000521977 COL17A1Q9UMD9 1497 aaPredicted RBP13.93□□□□□ -0.18
SHPRH-209ENST00000521977 FAM135AQ9P2D6 1515 aa13.93□□□□□ -0.18
SHPRH-209ENST00000521977 REM2Q8IYK8 340 aaPredicted RBP13.92□□□□□ -0.18
SHPRH-209ENST00000521977 MYT1LQ9UL68 1186 aa13.92□□□□□ -0.18
SHPRH-209ENST00000521977 VWDEQ8N2E2 1590 aa13.92□□□□□ -0.18
SHPRH-209ENST00000521977 ANKRD30BQ9BXX2 1392 aa13.91□□□□□ -0.18
SHPRH-209ENST00000521977 YEATS2Q9ULM3 1422 aa13.9□□□□□ -0.18
SHPRH-209ENST00000521977 PRDM15P57071 1507 aaPredicted RBP13.9□□□□□ -0.18
SHPRH-209ENST00000521977 MROH1Q8NDA8 1641 aa13.9□□□□□ -0.18
SHPRH-209ENST00000521977 RNF17Q9BXT8 1623 aaKnown RBP13.9□□□□□ -0.18
SHPRH-209ENST00000521977 SPDYE2BA6NHP3 402 aa13.9□□□□□ -0.18
SHPRH-209ENST00000521977 SPDYE6P0CI01 402 aa13.9□□□□□ -0.18
SHPRH-209ENST00000521977 SPDYE2Q495Y8 402 aa13.9□□□□□ -0.18
SHPRH-209ENST00000521977 REREQ9P2R6 1566 aa13.89□□□□□ -0.19
SHPRH-209ENST00000521977 TIMELESSQ9UNS1 1208 aa13.89□□□□□ -0.19
SHPRH-209ENST00000521977 PKD2Q13563 968 aa13.88□□□□□ -0.19
SHPRH-209ENST00000521977 SIN3AQ96ST3 1273 aa13.88□□□□□ -0.19
SHPRH-209ENST00000521977 KIF3BO15066 747 aa13.87□□□□□ -0.19
SHPRH-209ENST00000521977 ATP10AO60312 1499 aa13.87□□□□□ -0.19
SHPRH-209ENST00000521977 LMTK2Q8IWU2 1503 aa13.86□□□□□ -0.19
SHPRH-209ENST00000521977 ARHGEF40Q8TER5 1519 aa13.85□□□□□ -0.19
SHPRH-209ENST00000521977 AGLP35573 1532 aa13.85□□□□□ -0.19
SHPRH-209ENST00000521977 MKRN4PQ13434 485 aaPredicted RBP13.84□□□□□ -0.19
SHPRH-209ENST00000521977 RPRD2Q5VT52 1461 aaKnown RBP13.84□□□□□ -0.19
SHPRH-209ENST00000521977 TET3O43151 1660 aa13.84□□□□□ -0.19
SHPRH-209ENST00000521977 KANK1Q14678 1352 aa13.83□□□□□ -0.19
SHPRH-209ENST00000521977 NEUROD1Q13562 356 aa13.82□□□□□ -0.2
SHPRH-209ENST00000521977 E9PCH4 1651 aa13.81□□□□□ -0.2
SHPRH-209ENST00000521977 PLA2R1Q13018 1463 aa13.8□□□□□ -0.2
SHPRH-209ENST00000521977 EFCAB6Q5THR3 1501 aa13.8□□□□□ -0.2
SHPRH-209ENST00000521977 PTPRTO14522 1441 aa13.79□□□□□ -0.2
SHPRH-209ENST00000521977 CEP152O94986 1710 aa13.78□□□□□ -0.2
SHPRH-209ENST00000521977 SIGLEC1Q9BZZ2 1709 aa13.78□□□□□ -0.2
SHPRH-209ENST00000521977 TONSLQ96HA7 1378 aa13.78□□□□□ -0.2
SHPRH-209ENST00000521977 ABCC3O15438 1527 aa13.78□□□□□ -0.2
SHPRH-209ENST00000521977 ZC3H13Q5T200 1668 aaKnown RBP13.78□□□□□ -0.2
SHPRH-209ENST00000521977 PPP1R15AO75807 674 aaPredicted RBP13.76□□□□□ -0.21
SHPRH-209ENST00000521977 GGT6Q6P531 493 aa13.76□□□□□ -0.21
SHPRH-209ENST00000521977 TRPM2O94759 1503 aa13.75□□□□□ -0.21
SHPRH-209ENST00000521977 SPHKAPQ2M3C7 1700 aa13.75□□□□□ -0.21
SHPRH-209ENST00000521977 ARHGAP31Q2M1Z3 1444 aa13.74□□□□□ -0.21
SHPRH-209ENST00000521977 PITPNM1O00562 1244 aa13.74□□□□□ -0.21
SHPRH-209ENST00000521977 CCDC144AA2RUR9 1427 aa13.73□□□□□ -0.21
SHPRH-209ENST00000521977 CAMSAP1Q5T5Y3 1602 aa13.73□□□□□ -0.21
SHPRH-209ENST00000521977 NPATQ14207 1427 aa13.73□□□□□ -0.21
SHPRH-209ENST00000521977 WASHC2CQ9Y4E1 1318 aa13.72□□□□□ -0.21
SHPRH-209ENST00000521977 L3MBTL2Q969R5 705 aa13.71□□□□□ -0.21
SHPRH-209ENST00000521977 SSUH2Q9Y2M2 353 aa13.71□□□□□ -0.21
SHPRH-209ENST00000521977 NEURL4Q96JN8 1562 aa13.7□□□□□ -0.22
SHPRH-209ENST00000521977 CLTCL1P53675 1640 aa13.69□□□□□ -0.22
SHPRH-209ENST00000521977 NOS1P29475 1434 aa13.69□□□□□ -0.22
SHPRH-209ENST00000521977 CNTLNQ9NXG0 1405 aa13.69□□□□□ -0.22
SHPRH-209ENST00000521977 PIP4P2Q8N4L2 257 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms