RNA–Protein interactions for RNA: ENST00000521605.1

MRPS28-208, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2 BASIC

Gene MRPS28, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-208ENST00000521605 FBXO31Q5XUX0 539 aaPredicted RBP17.14■□□□□ 0.33
MRPS28-208ENST00000521605 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.14■□□□□ 0.33
MRPS28-208ENST00000521605 TNRQ92752 1358 aa17.13■□□□□ 0.33
MRPS28-208ENST00000521605 GPATCH8Q9UKJ3 1502 aaKnown RBP17.12■□□□□ 0.33
MRPS28-208ENST00000521605 ANKLE2Q86XL3 938 aa17.12■□□□□ 0.33
MRPS28-208ENST00000521605 RGS17Q9UGC6 210 aaPredicted RBP17.12■□□□□ 0.33
MRPS28-208ENST00000521605 CASKIN1Q8WXD9 1431 aa17.11■□□□□ 0.33
MRPS28-208ENST00000521605 NPHP4O75161 1426 aaPredicted RBP17.1■□□□□ 0.33
MRPS28-208ENST00000521605 ADGBQ8N7X0 1667 aa17.1■□□□□ 0.33
MRPS28-208ENST00000521605 CFDP1Q9UEE9 299 aaPredicted RBP17.09■□□□□ 0.33
MRPS28-208ENST00000521605 KIAA1107Q9UPP5 1409 aa17.08■□□□□ 0.32
MRPS28-208ENST00000521605 PLEKHH2Q8IVE3 1493 aa17.07■□□□□ 0.32
MRPS28-208ENST00000521605 RNF17Q9BXT8 1623 aaKnown RBP17.07■□□□□ 0.32
MRPS28-208ENST00000521605 THEMISQ8N1K5 641 aaPredicted RBP17.06■□□□□ 0.32
MRPS28-208ENST00000521605 STRCP1A6NGW2 1772 aa17.06■□□□□ 0.32
MRPS28-208ENST00000521605 LRRC7Q96NW7 1537 aa17.06■□□□□ 0.32
MRPS28-208ENST00000521605 IQGAP1P46940 1657 aa17.05■□□□□ 0.32
MRPS28-208ENST00000521605 UGGT1Q9NYU2 1555 aa17.05■□□□□ 0.32
MRPS28-208ENST00000521605 PZPP20742 1482 aa17.05■□□□□ 0.32
MRPS28-208ENST00000521605 CCNB3Q8WWL7 1395 aa17.03■□□□□ 0.32
MRPS28-208ENST00000521605 FAM135AQ9P2D6 1515 aa17.03■□□□□ 0.32
MRPS28-208ENST00000521605 KIF3BO15066 747 aa17.03■□□□□ 0.32
MRPS28-208ENST00000521605 MED14O60244 1454 aa17.03■□□□□ 0.32
MRPS28-208ENST00000521605 DEPDC5O75140 1603 aa17.03■□□□□ 0.32
MRPS28-208ENST00000521605 KDM5DQ9BY66 1539 aa17.02■□□□□ 0.32
MRPS28-208ENST00000521605 POTEAQ6S8J7 498 aa17.02■□□□□ 0.32
MRPS28-208ENST00000521605 ZNF644Q9H582 1327 aaPredicted RBP17.01■□□□□ 0.31
MRPS28-208ENST00000521605 WASHC2CQ9Y4E1 1318 aa17.01■□□□□ 0.31
MRPS28-208ENST00000521605 FYCO1Q9BQS8 1478 aa17.01■□□□□ 0.31
MRPS28-208ENST00000521605 SYNMO15061 1565 aa17.01■□□□□ 0.31
MRPS28-208ENST00000521605 MIA2Q96PC5 1412 aa17■□□□□ 0.31
MRPS28-208ENST00000521605 DHX29Q7Z478 1369 aaKnown RBP17■□□□□ 0.31
MRPS28-208ENST00000521605 NLRP1Q9C000 1473 aa16.99■□□□□ 0.31
MRPS28-208ENST00000521605 CEP162Q5TB80 1403 aa16.99■□□□□ 0.31
MRPS28-208ENST00000521605 SETD1AO15047 1707 aaKnown RBP16.97■□□□□ 0.31
MRPS28-208ENST00000521605 MBD5Q9P267 1494 aa16.95■□□□□ 0.3
MRPS28-208ENST00000521605 RTEL1-TNFRSF6BF6WH68 1400 aa16.94■□□□□ 0.3
MRPS28-208ENST00000521605 MTUS2Q5JR59 1369 aa16.93■□□□□ 0.3
MRPS28-208ENST00000521605 ZC3H13Q5T200 1668 aaKnown RBP16.92■□□□□ 0.3
MRPS28-208ENST00000521605 TIAM1Q13009 1591 aa16.92■□□□□ 0.3
MRPS28-208ENST00000521605 PIAS4Q8N2W9 510 aaPredicted RBP16.91■□□□□ 0.3
MRPS28-208ENST00000521605 XIRP1Q702N8 1843 aaKnown RBP16.89■□□□□ 0.29
MRPS28-208ENST00000521605 CCDC141Q6ZP82 1450 aa16.86■□□□□ 0.29
MRPS28-208ENST00000521605 SCAF11Q99590 1463 aaKnown RBP16.86■□□□□ 0.29
MRPS28-208ENST00000521605 FAM135BQ49AJ0 1406 aa16.86■□□□□ 0.29
MRPS28-208ENST00000521605 ROBO1Q9Y6N7 1651 aa16.85■□□□□ 0.29
MRPS28-208ENST00000521605 UBR1Q8IWV7 1749 aa16.84■□□□□ 0.29
MRPS28-208ENST00000521605 LTKP29376 864 aa16.84■□□□□ 0.29
MRPS28-208ENST00000521605 TXNDC2Q86VQ3 553 aa16.84■□□□□ 0.29
MRPS28-208ENST00000521605 ERVK-7P63135 1459 aa16.84■□□□□ 0.29
MRPS28-208ENST00000521605 ABCC3O15438 1527 aa16.84■□□□□ 0.29
MRPS28-208ENST00000521605 CAMSAP2Q08AD1 1489 aa16.82■□□□□ 0.28
MRPS28-208ENST00000521605 RBM33Q96EV2 1170 aaKnown RBP16.82■□□□□ 0.28
MRPS28-208ENST00000521605 EHBP1L1Q8N3D4 1523 aa16.81■□□□□ 0.28
MRPS28-208ENST00000521605 TMEM94Q12767 1356 aa16.81■□□□□ 0.28
MRPS28-208ENST00000521605 NCOA2Q15596 1464 aa16.8■□□□□ 0.28
MRPS28-208ENST00000521605 CFAP65Q6ZU64 1925 aaKnown RBP16.79■□□□□ 0.28
MRPS28-208ENST00000521605 UPF1Q92900 1129 aaKnown RBP eCLIP16.78■□□□□ 0.28
MRPS28-208ENST00000521605 TRIM52Q96A61 297 aa16.78■□□□□ 0.28
MRPS28-208ENST00000521605 EID1Q9Y6B2 187 aa16.78■□□□□ 0.28
MRPS28-208ENST00000521605 CEP152O94986 1710 aa16.78■□□□□ 0.28
MRPS28-208ENST00000521605 TSPY4P0CV99 314 aa16.77■□□□□ 0.28
MRPS28-208ENST00000521605 TSPY10P0CW01 314 aa16.77■□□□□ 0.28
MRPS28-208ENST00000521605 ARHGAP23Q9P227 1491 aa16.77■□□□□ 0.28
MRPS28-208ENST00000521605 VPS8Q8N3P4 1428 aa16.77■□□□□ 0.27
MRPS28-208ENST00000521605 SLIT1O75093 1534 aa16.76■□□□□ 0.27
MRPS28-208ENST00000521605 TRIM26Q12899 539 aaPredicted RBP16.76■□□□□ 0.27
MRPS28-208ENST00000521605 PHLPP1O60346 1717 aa16.76■□□□□ 0.27
MRPS28-208ENST00000521605 RSPH4AQ5TD94 716 aa16.75■□□□□ 0.27
MRPS28-208ENST00000521605 PROSER2Q86WR7 435 aaPredicted RBP16.75■□□□□ 0.27
MRPS28-208ENST00000521605 MAP3K1Q13233 1512 aa16.75■□□□□ 0.27
MRPS28-208ENST00000521605 JCADQ9P266 1359 aa16.74■□□□□ 0.27
MRPS28-208ENST00000521605 MROH1Q8NDA8 1641 aa16.73■□□□□ 0.27
MRPS28-208ENST00000521605 LRRC9Q6ZRR7 1453 aa16.73■□□□□ 0.27
MRPS28-208ENST00000521605 ARHGEF5Q12774 1597 aa16.72■□□□□ 0.27
MRPS28-208ENST00000521605 MEX3CQ5U5Q3 659 aaKnown RBP16.72■□□□□ 0.27
MRPS28-208ENST00000521605 SLC26A8Q96RN1 970 aa16.72■□□□□ 0.27
MRPS28-208ENST00000521605 STAG3Q9UJ98 1225 aa16.72■□□□□ 0.27
MRPS28-208ENST00000521605 PIK3C2BO00750 1634 aa16.71■□□□□ 0.27
MRPS28-208ENST00000521605 KCNA6P17658 529 aa16.71■□□□□ 0.27
MRPS28-208ENST00000521605 EIF2AK4Q9P2K8 1649 aaKnown RBP16.7■□□□□ 0.26
MRPS28-208ENST00000521605 TMEM2Q9UHN6 1383 aa16.7■□□□□ 0.26
MRPS28-208ENST00000521605 LRP6O75581 1613 aa16.7■□□□□ 0.26
MRPS28-208ENST00000521605 MSH6P52701 1360 aa16.68■□□□□ 0.26
MRPS28-208ENST00000521605 ZNF772Q68DY9 489 aaPredicted RBP16.68■□□□□ 0.26
MRPS28-208ENST00000521605 SLAIN2Q9P270 581 aa16.68■□□□□ 0.26
MRPS28-208ENST00000521605 PRDM15P57071 1507 aaPredicted RBP16.68■□□□□ 0.26
MRPS28-208ENST00000521605 BCANQ96GW7 911 aa16.66■□□□□ 0.26
MRPS28-208ENST00000521605 COL16A1Q07092 1604 aaPredicted RBP16.66■□□□□ 0.26
MRPS28-208ENST00000521605 MAST1Q9Y2H9 1570 aa16.64■□□□□ 0.25
MRPS28-208ENST00000521605 NKTRP30414 1462 aaKnown RBP16.64■□□□□ 0.25
MRPS28-208ENST00000521605 EFCAB6Q5THR3 1501 aa16.64■□□□□ 0.25
MRPS28-208ENST00000521605 SRCAPQ6ZRS2 3230 aa16.64■□□□□ 0.25
MRPS28-208ENST00000521605 RXRBP28702 533 aa16.63■□□□□ 0.25
MRPS28-208ENST00000521605 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.63■□□□□ 0.251e-8■■■□□ 15.2
MRPS28-208ENST00000521605 SPATA31A6Q5VVP1 1343 aa16.63■□□□□ 0.25
MRPS28-208ENST00000521605 TET3O43151 1660 aa16.62■□□□□ 0.25
MRPS28-208ENST00000521605 NWD1Q149M9 1564 aa16.62■□□□□ 0.25
MRPS28-208ENST00000521605 ARHGAP31Q2M1Z3 1444 aa16.62■□□□□ 0.25
MRPS28-208ENST00000521605 DUOX2Q9NRD8 1548 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms