RNA–Protein interactions for RNA: ENST00000521604.6

TCEA1-208, Transcript of transcription elongation factor A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TCEA1, Length 2,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA1-208ENST00000521604 NBPF1Q3BBV0 1214 aa23.56■■□□□ 1.36
TCEA1-208ENST00000521604 UHRF1BP1Q6BDS2 1440 aa23.56■■□□□ 1.36
TCEA1-208ENST00000521604 KIAA0586Q9BVV6 1533 aa23.56■■□□□ 1.36
TCEA1-208ENST00000521604 HNRNPMP52272 730 aaKnown RBP eCLIP23.54■■□□□ 1.361e-6■■■■□ 21.8
TCEA1-208ENST00000521604 CRBNQ96SW2 442 aa23.53■■□□□ 1.36
TCEA1-208ENST00000521604 KTN1Q86UP2 1357 aaKnown RBP23.53■■□□□ 1.36
TCEA1-208ENST00000521604 TSPY4P0CV99 314 aa23.52■■□□□ 1.36
TCEA1-208ENST00000521604 TSPY10P0CW01 314 aa23.52■■□□□ 1.36
TCEA1-208ENST00000521604 ANO8Q9HCE9 1232 aaPredicted RBP23.51■■□□□ 1.35
TCEA1-208ENST00000521604 ADGRL2O95490 1459 aa23.5■■□□□ 1.35
TCEA1-208ENST00000521604 SLC4A3P48751 1232 aa23.49■■□□□ 1.35
TCEA1-208ENST00000521604 PER1O15534 1290 aaPredicted RBP23.49■■□□□ 1.35
TCEA1-208ENST00000521604 C20orf194Q5TEA3 1177 aa23.49■■□□□ 1.35
TCEA1-208ENST00000521604 C9orf84Q5VXU9 1444 aa23.47■■□□□ 1.35
TCEA1-208ENST00000521604 PDE3BQ13370 1112 aa23.47■■□□□ 1.35
TCEA1-208ENST00000521604 PLEKHD1A6NEE1 506 aa23.47■■□□□ 1.35
TCEA1-208ENST00000521604 ADGBQ8N7X0 1667 aa23.46■■□□□ 1.35
TCEA1-208ENST00000521604 PARD3Q8TEW0 1356 aa23.46■■□□□ 1.35
TCEA1-208ENST00000521604 CHMP7Q8WUX9 453 aaPredicted RBP23.46■■□□□ 1.35
TCEA1-208ENST00000521604 MS4A1P11836 297 aa23.46■■□□□ 1.35
TCEA1-208ENST00000521604 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.45■■□□□ 1.343e-7■■■■□ 23.7
TCEA1-208ENST00000521604 PANK3Q9H999 370 aa23.45■■□□□ 1.34
TCEA1-208ENST00000521604 GRIN2AQ12879 1464 aa23.41■■□□□ 1.34
TCEA1-208ENST00000521604 ARHGEF12Q9NZN5 1544 aa23.4■■□□□ 1.34
TCEA1-208ENST00000521604 ITSN2Q9NZM3 1697 aa23.4■■□□□ 1.34
TCEA1-208ENST00000521604 MRC2Q9UBG0 1479 aa23.4■■□□□ 1.34
TCEA1-208ENST00000521604 DISP3Q9P2K9 1392 aa23.39■■□□□ 1.34
TCEA1-208ENST00000521604 JPH4Q96JJ6 628 aa23.38■■□□□ 1.33
TCEA1-208ENST00000521604 CROCC2H7BZ55 1655 aa23.38■■□□□ 1.33
TCEA1-208ENST00000521604 ADAMTS8Q9UP79 889 aa23.38■■□□□ 1.33
TCEA1-208ENST00000521604 PPM1GO15355 546 aaPredicted RBP23.36■■□□□ 1.33
TCEA1-208ENST00000521604 TESK2Q96S53 571 aa23.35■■□□□ 1.33
TCEA1-208ENST00000521604 USP35Q9P2H5 1018 aa23.35■■□□□ 1.33
TCEA1-208ENST00000521604 PRAG1Q86YV5 1406 aa23.34■■□□□ 1.33
TCEA1-208ENST00000521604 CCDC144AA2RUR9 1427 aa23.33■■□□□ 1.33
TCEA1-208ENST00000521604 E9PCH4 1651 aa23.32■■□□□ 1.32
TCEA1-208ENST00000521604 IFT140Q96RY7 1462 aa23.32■■□□□ 1.32
TCEA1-208ENST00000521604 CEP170Q5SW79 1584 aa23.32■■□□□ 1.32
TCEA1-208ENST00000521604 BRPF3Q9ULD4 1205 aa23.3■■□□□ 1.32
TCEA1-208ENST00000521604 NFKBIBQ15653 356 aa23.29■■□□□ 1.32
TCEA1-208ENST00000521604 DDRGK1Q96HY6 314 aa23.29■■□□□ 1.32
TCEA1-208ENST00000521604 CDC42BPAQ5VT25 1732 aa23.28■■□□□ 1.32
TCEA1-208ENST00000521604 RGS3P49796 1198 aa23.28■■□□□ 1.32
TCEA1-208ENST00000521604 DAXXQ9UER7 740 aaPredicted RBP23.28■■□□□ 1.32
TCEA1-208ENST00000521604 KDM5DQ9BY66 1539 aa23.28■■□□□ 1.32
TCEA1-208ENST00000521604 MAGI1Q96QZ7 1491 aaPredicted RBP23.28■■□□□ 1.32
TCEA1-208ENST00000521604 ATP10BO94823 1461 aa23.27■■□□□ 1.31
TCEA1-208ENST00000521604 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.26■■□□□ 1.31
TCEA1-208ENST00000521604 PTPRGP23470 1445 aa23.26■■□□□ 1.31
TCEA1-208ENST00000521604 ABCC10Q5T3U5 1492 aa23.26■■□□□ 1.31
TCEA1-208ENST00000521604 TMF1P82094 1093 aa23.26■■□□□ 1.31
TCEA1-208ENST00000521604 BLMP54132 1417 aaPredicted RBP23.26■■□□□ 1.31
TCEA1-208ENST00000521604 CARMIL2Q6F5E8 1435 aa23.26■■□□□ 1.31
TCEA1-208ENST00000521604 FAM135AQ9P2D6 1515 aa23.26■■□□□ 1.31
TCEA1-208ENST00000521604 ADCY10Q96PN6 1610 aa23.25■■□□□ 1.31
TCEA1-208ENST00000521604 KDM2BQ8NHM5 1336 aa23.24■■□□□ 1.31
TCEA1-208ENST00000521604 WASHC2CQ9Y4E1 1318 aa23.24■■□□□ 1.31
TCEA1-208ENST00000521604 PLEKHH1Q9ULM0 1364 aa23.24■■□□□ 1.31
TCEA1-208ENST00000521604 SHANK2Q9UPX8 1470 aa23.24■■□□□ 1.31
TCEA1-208ENST00000521604 ERBINQ96RT1 1412 aa23.24■■□□□ 1.31
TCEA1-208ENST00000521604 GSE1Q14687 1217 aa23.23■■□□□ 1.31
TCEA1-208ENST00000521604 WDR43Q15061 677 aaKnown RBP eCLIP23.23■■□□□ 1.31
TCEA1-208ENST00000521604 DUSP27Q5VZP5 1158 aa23.23■■□□□ 1.31
TCEA1-208ENST00000521604 COL17A1Q9UMD9 1497 aaPredicted RBP23.23■■□□□ 1.31
TCEA1-208ENST00000521604 CCDC146Q8IYE0 955 aa23.22■■□□□ 1.31
TCEA1-208ENST00000521604 A2MP01023 1474 aa23.22■■□□□ 1.31
TCEA1-208ENST00000521604 PLA2R1Q13018 1463 aa23.22■■□□□ 1.31
TCEA1-208ENST00000521604 TRPM1Q7Z4N2 1603 aa23.21■■□□□ 1.31
TCEA1-208ENST00000521604 EIF4G3O43432 1585 aaKnown RBP23.21■■□□□ 1.31
TCEA1-208ENST00000521604 CENPQQ7L2Z9 268 aaPredicted RBP23.2■■□□□ 1.3
TCEA1-208ENST00000521604 FRAT1Q92837 279 aaPredicted RBP23.2■■□□□ 1.3
TCEA1-208ENST00000521604 KNSTRNQ9Y448 316 aa23.2■■□□□ 1.3
TCEA1-208ENST00000521604 PPP2R1AP30153 589 aa23.2■■□□□ 1.3
TCEA1-208ENST00000521604 C8orf34Q49A92 452 aa23.2■■□□□ 1.3
TCEA1-208ENST00000521604 PRKCSHP14314 528 aaPredicted RBP23.19■■□□□ 1.3
TCEA1-208ENST00000521604 FAM161AQ3B820 660 aa23.18■■□□□ 1.3
TCEA1-208ENST00000521604 GPRASP1Q5JY77 1395 aa23.18■■□□□ 1.3
TCEA1-208ENST00000521604 GOLGA2Q08379 1002 aa23.17■■□□□ 1.3
TCEA1-208ENST00000521604 ZMYM4Q5VZL5 1548 aa23.17■■□□□ 1.3
TCEA1-208ENST00000521604 SPINK5Q9NQ38 1064 aaPredicted RBP23.15■■□□□ 1.3
TCEA1-208ENST00000521604 FRAT2O75474 233 aaPredicted RBP23.15■■□□□ 1.3
TCEA1-208ENST00000521604 BCAR3O75815 825 aa23.13■■□□□ 1.29
TCEA1-208ENST00000521604 CCDC141Q6ZP82 1450 aa23.12■■□□□ 1.29
TCEA1-208ENST00000521604 SYNJ2O15056 1496 aa23.12■■□□□ 1.29
TCEA1-208ENST00000521604 MAGI2Q86UL8 1455 aa23.12■■□□□ 1.29
TCEA1-208ENST00000521604 ABCA8O94911 1581 aa23.11■■□□□ 1.29
TCEA1-208ENST00000521604 APAF1O14727 1248 aa23.1■■□□□ 1.29
TCEA1-208ENST00000521604 AMER1Q5JTC6 1135 aaPredicted RBP23.1■■□□□ 1.29
TCEA1-208ENST00000521604 PRDM15P57071 1507 aaPredicted RBP23.09■■□□□ 1.29
TCEA1-208ENST00000521604 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.09■■□□□ 1.29
TCEA1-208ENST00000521604 PLEKHH2Q8IVE3 1493 aa23.09■■□□□ 1.29
TCEA1-208ENST00000521604 SLFN5Q08AF3 891 aa23.08■■□□□ 1.29
TCEA1-208ENST00000521604 ZNF521Q96K83 1311 aa23.08■■□□□ 1.29
TCEA1-208ENST00000521604 SAMD9LQ8IVG5 1584 aa23.07■■□□□ 1.28
TCEA1-208ENST00000521604 INSRP06213 1382 aa23.07■■□□□ 1.28
TCEA1-208ENST00000521604 DMRT2Q9Y5R5 561 aa23.06■■□□□ 1.28
TCEA1-208ENST00000521604 IGHDP01880 384 aa23.05■■□□□ 1.28
TCEA1-208ENST00000521604 ARHGEF5Q12774 1597 aa23.04■■□□□ 1.28
TCEA1-208ENST00000521604 WDR7Q9Y4E6 1490 aa23.04■■□□□ 1.28
TCEA1-208ENST00000521604 SYCP2Q9BX26 1530 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms