RNA–Protein interactions for RNA: ENST00000521398.5

LAMA4-215, Transcript of laminin subunit alpha 4, humanhuman

TSL 5

Gene LAMA4, Length 1,330 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-215ENST00000521398 PCGF6Q9BYE7 350 aa29.12■■■□□ 2.25
LAMA4-215ENST00000521398 PPP6R1Q9UPN7 881 aa29.12■■■□□ 2.25
LAMA4-215ENST00000521398 PRDM15P57071 1507 aaPredicted RBP29.12■■■□□ 2.25
LAMA4-215ENST00000521398 FAM135AQ9P2D6 1515 aa29.12■■■□□ 2.25
LAMA4-215ENST00000521398 HRCP23327 699 aa29.11■■■□□ 2.25
LAMA4-215ENST00000521398 RAB3GAP2Q9H2M9 1393 aa29.1■■■□□ 2.25
LAMA4-215ENST00000521398 MROH1Q8NDA8 1641 aa29.09■■■□□ 2.25
LAMA4-215ENST00000521398 GGT6Q6P531 493 aa29.09■■■□□ 2.25
LAMA4-215ENST00000521398 KANK1Q14678 1352 aa29.06■■■□□ 2.24
LAMA4-215ENST00000521398 KDM5DQ9BY66 1539 aa29.05■■■□□ 2.24
LAMA4-215ENST00000521398 MLECQ14165 292 aa29.05■■■□□ 2.24
LAMA4-215ENST00000521398 VWDEQ8N2E2 1590 aa29.03■■■□□ 2.24
LAMA4-215ENST00000521398 ZC3H13Q5T200 1668 aaKnown RBP29.03■■■□□ 2.24
LAMA4-215ENST00000521398 ADAMTSL3P82987 1691 aa29.01■■■□□ 2.24
LAMA4-215ENST00000521398 CNTLNQ9NXG0 1405 aa29.01■■■□□ 2.23
LAMA4-215ENST00000521398 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29■■■□□ 2.23
LAMA4-215ENST00000521398 NUP155O75694 1391 aa29■■■□□ 2.23
LAMA4-215ENST00000521398 IQGAP3Q86VI3 1631 aa28.99■■■□□ 2.23
LAMA4-215ENST00000521398 ESF1Q9H501 851 aaKnown RBP28.98■■■□□ 2.23
LAMA4-215ENST00000521398 LMTK2Q8IWU2 1503 aa28.98■■■□□ 2.23
LAMA4-215ENST00000521398 FER1L4A9Z1Z3 1794 aa28.98■■■□□ 2.23
LAMA4-215ENST00000521398 WASHC2CQ9Y4E1 1318 aa28.97■■■□□ 2.23
LAMA4-215ENST00000521398 ABCC3O15438 1527 aa28.97■■■□□ 2.23
LAMA4-215ENST00000521398 TRIM52Q96A61 297 aa28.95■■■□□ 2.23
LAMA4-215ENST00000521398 MADDQ8WXG6 1647 aa28.94■■■□□ 2.22
LAMA4-215ENST00000521398 MROH2AA6NES4 1674 aa28.93■■■□□ 2.22
LAMA4-215ENST00000521398 CLTCQ00610 1675 aaKnown RBP28.93■■■□□ 2.22
LAMA4-215ENST00000521398 CEP152O94986 1710 aa28.92■■■□□ 2.22
LAMA4-215ENST00000521398 TET3O43151 1660 aa28.9■■■□□ 2.22
LAMA4-215ENST00000521398 PZPP20742 1482 aa28.89■■■□□ 2.22
LAMA4-215ENST00000521398 CAMSAP1Q5T5Y3 1602 aa28.89■■■□□ 2.21
LAMA4-215ENST00000521398 ARHGAP31Q2M1Z3 1444 aa28.87■■■□□ 2.21
LAMA4-215ENST00000521398 RIMS1Q86UR5 1692 aaKnown RBP28.87■■■□□ 2.21
LAMA4-215ENST00000521398 EFCAB6Q5THR3 1501 aa28.87■■■□□ 2.21
LAMA4-215ENST00000521398 SLC4A1APQ9BWU0 796 aaKnown RBP28.84■■■□□ 2.21
LAMA4-215ENST00000521398 ZMYM3Q14202 1370 aa28.84■■■□□ 2.21
LAMA4-215ENST00000521398 RPRD2Q5VT52 1461 aaKnown RBP28.83■■■□□ 2.21
LAMA4-215ENST00000521398 KDM4FA0A1W2PPD8 638 aa28.81■■■□□ 2.2
LAMA4-215ENST00000521398 MPHOSPH9Q99550 1183 aa28.81■■■□□ 2.2
LAMA4-215ENST00000521398 NPATQ14207 1427 aa28.79■■■□□ 2.2
LAMA4-215ENST00000521398 PTPRMP28827 1452 aa28.78■■■□□ 2.2
LAMA4-215ENST00000521398 E9PCH4 1651 aa28.78■■■□□ 2.2
LAMA4-215ENST00000521398 C3P01024 1663 aa28.78■■■□□ 2.2
LAMA4-215ENST00000521398 PKD2Q13563 968 aa28.75■■■□□ 2.19
LAMA4-215ENST00000521398 SPATA31D1Q6ZQQ2 1576 aa28.71■■■□□ 2.19
LAMA4-215ENST00000521398 PREX1Q8TCU6 1659 aa28.7■■■□□ 2.18
LAMA4-215ENST00000521398 ERVK-7P63135 1459 aa28.7■■■□□ 2.18
LAMA4-215ENST00000521398 NOS1P29475 1434 aa28.68■■■□□ 2.18
LAMA4-215ENST00000521398 DHX57Q6P158 1386 aaKnown RBP28.68■■■□□ 2.18
LAMA4-215ENST00000521398 CEBPAP49715 358 aaPredicted RBP28.68■■■□□ 2.18
LAMA4-215ENST00000521398 PTPRTO14522 1441 aa28.66■■■□□ 2.18
LAMA4-215ENST00000521398 SPHKAPQ2M3C7 1700 aa28.65■■■□□ 2.18
LAMA4-215ENST00000521398 FBXO31Q5XUX0 539 aaPredicted RBP28.64■■■□□ 2.17
LAMA4-215ENST00000521398 CFAP65Q6ZU64 1925 aaKnown RBP28.63■■■□□ 2.17
LAMA4-215ENST00000521398 TRPM2O94759 1503 aa28.62■■■□□ 2.17
LAMA4-215ENST00000521398 TNRQ92752 1358 aa28.62■■■□□ 2.17
LAMA4-215ENST00000521398 FOXD1Q16676 465 aa28.6■■■□□ 2.17
LAMA4-215ENST00000521398 SYNMO15061 1565 aa28.6■■■□□ 2.17
LAMA4-215ENST00000521398 SETD1BQ9UPS6 1966 aaKnown RBP28.59■■■□□ 2.17
LAMA4-215ENST00000521398 PLPPR3Q6T4P5 718 aa28.59■■■□□ 2.17
LAMA4-215ENST00000521398 PLA2R1Q13018 1463 aa28.58■■■□□ 2.17
LAMA4-215ENST00000521398 ANKRD30BQ9BXX2 1392 aa28.57■■■□□ 2.16
LAMA4-215ENST00000521398 SLC52A1Q9NWF4 448 aa28.57■■■□□ 2.16
LAMA4-215ENST00000521398 NLRP1Q9C000 1473 aa28.56■■■□□ 2.16
LAMA4-215ENST00000521398 PIK3C2BO00750 1634 aa28.54■■■□□ 2.16
LAMA4-215ENST00000521398 CCDC144AA2RUR9 1427 aa28.52■■■□□ 2.16
LAMA4-215ENST00000521398 MYO3AQ8NEV4 1616 aa28.52■■■□□ 2.16
LAMA4-215ENST00000521398 CLSPNQ9HAW4 1339 aa28.51■■■□□ 2.15
LAMA4-215ENST00000521398 CLTCL1P53675 1640 aa28.49■■■□□ 2.15
LAMA4-215ENST00000521398 UHRF1BP1Q6BDS2 1440 aa28.48■■■□□ 2.15
LAMA4-215ENST00000521398 UGGT1Q9NYU2 1555 aa28.47■■■□□ 2.15
LAMA4-215ENST00000521398 A2ML1A8K2U0 1454 aa28.46■■■□□ 2.15
LAMA4-215ENST00000521398 ZNF142P52746 1687 aaPredicted RBP28.46■■■□□ 2.15
LAMA4-215ENST00000521398 IDI1Q13907 227 aa28.46■■■□□ 2.15
LAMA4-215ENST00000521398 KDM5AP29375 1690 aaKnown RBP28.46■■■□□ 2.15
LAMA4-215ENST00000521398 CEP170BQ9Y4F5 1589 aaPredicted RBP28.45■■■□□ 2.14
LAMA4-215ENST00000521398 CCER1Q8TC90 406 aaPredicted RBP28.44■■■□□ 2.14
LAMA4-215ENST00000521398 KIF1BO60333 1816 aa28.42■■■□□ 2.14
LAMA4-215ENST00000521398 ADGRB3O60242 1522 aa28.42■■■□□ 2.14
LAMA4-215ENST00000521398 NEURL4Q96JN8 1562 aa28.41■■■□□ 2.14
LAMA4-215ENST00000521398 TMEM131LA2VDJ0 1609 aa28.38■■■□□ 2.13
LAMA4-215ENST00000521398 UBR1Q8IWV7 1749 aa28.38■■■□□ 2.13
LAMA4-215ENST00000521398 STAG3Q9UJ98 1225 aa28.38■■■□□ 2.13
LAMA4-215ENST00000521398 THEMISQ8N1K5 641 aaPredicted RBP28.34■■■□□ 2.13
LAMA4-215ENST00000521398 SPATA31E1Q6ZUB1 1445 aa28.33■■■□□ 2.13
LAMA4-215ENST00000521398 LMTK3Q96Q04 1460 aa28.33■■■□□ 2.13
LAMA4-215ENST00000521398 CHGAP10645 457 aaKnown RBP28.33■■■□□ 2.13
LAMA4-215ENST00000521398 AEBP2Q6ZN18 517 aaPredicted RBP28.31■■■□□ 2.12
LAMA4-215ENST00000521398 SIN3AQ96ST3 1273 aa28.3■■■□□ 2.12
LAMA4-215ENST00000521398 MYO5BQ9ULV0 1848 aa28.29■■■□□ 2.12
LAMA4-215ENST00000521398 SLIT1O75093 1534 aa28.27■■■□□ 2.12
LAMA4-215ENST00000521398 RPGRIP1LQ68CZ1 1315 aa28.26■■■□□ 2.11
LAMA4-215ENST00000521398 TMEM2Q9UHN6 1383 aa28.26■■■□□ 2.11
LAMA4-215ENST00000521398 ARHGAP23Q9P227 1491 aa28.26■■■□□ 2.11
LAMA4-215ENST00000521398 NEUROD1Q13562 356 aa28.25■■■□□ 2.11
LAMA4-215ENST00000521398 ZNF326Q5BKZ1 582 aaKnown RBP28.24■■■□□ 2.11
LAMA4-215ENST00000521398 HDGFP51858 240 aaKnown RBP28.23■■■□□ 2.11
LAMA4-215ENST00000521398 ZFYVE9O95405 1425 aa28.21■■■□□ 2.11
LAMA4-215ENST00000521398 RGL3Q3MIN7 710 aa28.21■■■□□ 2.11
LAMA4-215ENST00000521398 RIMS2Q9UQ26 1411 aa28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms