RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 SLC24A3Q9HC58 644 aa7.34□□□□□ -1.23
HMGN1P28-201ENST00000521340 HRO43593 1189 aa7.32□□□□□ -1.24
HMGN1P28-201ENST00000521340 TK2O00142 265 aa7.31□□□□□ -1.24
HMGN1P28-201ENST00000521340 ANO8Q9HCE9 1232 aaPredicted RBP7.31□□□□□ -1.24
HMGN1P28-201ENST00000521340 RBM26Q5T8P6 1007 aaKnown RBP7.3□□□□□ -1.24
HMGN1P28-201ENST00000521340 GPR37O15354 613 aa7.29□□□□□ -1.24
HMGN1P28-201ENST00000521340 FOSBP53539 338 aa7.29□□□□□ -1.24
HMGN1P28-201ENST00000521340 PDIA6Q15084 440 aa7.29□□□□□ -1.24
HMGN1P28-201ENST00000521340 ZNF454Q8N9F8 522 aa7.29□□□□□ -1.24
HMGN1P28-201ENST00000521340 KCNK17Q96T54 332 aa7.29□□□□□ -1.24
HMGN1P28-201ENST00000521340 EVI5O60447 810 aa7.28□□□□□ -1.24
HMGN1P28-201ENST00000521340 DPYSL4O14531 572 aa7.27□□□□□ -1.25
HMGN1P28-201ENST00000521340 SMYD5Q6GMV2 418 aa7.27□□□□□ -1.25
HMGN1P28-201ENST00000521340 BCL2L12Q9HB09 334 aa7.26□□□□□ -1.25
HMGN1P28-201ENST00000521340 VPS9D1Q9Y2B5 631 aa7.26□□□□□ -1.25
HMGN1P28-201ENST00000521340 SPDYE16A6NNV3 312 aaPredicted RBP7.25□□□□□ -1.25
HMGN1P28-201ENST00000521340 MAP3K9P80192 1104 aa7.24□□□□□ -1.25
HMGN1P28-201ENST00000521340 JPH4Q96JJ6 628 aa7.24□□□□□ -1.25
HMGN1P28-201ENST00000521340 HCSTQ9UBK5 93 aa7.24□□□□□ -1.25
HMGN1P28-201ENST00000521340 SLC4A5Q9BY07 1137 aa7.23□□□□□ -1.25
HMGN1P28-201ENST00000521340 ADAM33Q9BZ11 813 aa7.23□□□□□ -1.25
HMGN1P28-201ENST00000521340 BHMG1C9JSJ3 638 aaPredicted RBP7.22□□□□□ -1.25
HMGN1P28-201ENST00000521340 NEUROD2Q15784 382 aa7.22□□□□□ -1.25
HMGN1P28-201ENST00000521340 ZDHHC16Q969W1 377 aa7.22□□□□□ -1.25
HMGN1P28-201ENST00000521340 PTPREP23469 700 aa7.21□□□□□ -1.26
HMGN1P28-201ENST00000521340 KCTD12Q96CX2 325 aaKnown RBP7.21□□□□□ -1.26
HMGN1P28-201ENST00000521340 KCNH8Q96L42 1107 aa7.21□□□□□ -1.26
HMGN1P28-201ENST00000521340 AK7Q96M32 723 aa7.21□□□□□ -1.26
HMGN1P28-201ENST00000521340 ZBED2Q9BTP6 218 aa7.21□□□□□ -1.26
HMGN1P28-201ENST00000521340 PCDHGA10Q9Y5H3 936 aa7.21□□□□□ -1.26
HMGN1P28-201ENST00000521340 TRIM66O15016 1216 aa7.2□□□□□ -1.26
HMGN1P28-201ENST00000521340 PLA2G2EQ9NZK7 142 aa7.2□□□□□ -1.26
HMGN1P28-201ENST00000521340 OSBPP22059 807 aa7.19□□□□□ -1.26
HMGN1P28-201ENST00000521340 PRIM1P49642 420 aaKnown RBP7.19□□□□□ -1.26
HMGN1P28-201ENST00000521340 GPIHBP1Q8IV16 184 aa7.19□□□□□ -1.26
HMGN1P28-201ENST00000521340 STAC3Q96MF2 364 aa7.19□□□□□ -1.26
HMGN1P28-201ENST00000521340 GPBP1L1Q9HC44 474 aaPredicted RBP7.18□□□□□ -1.26
HMGN1P28-201ENST00000521340 COL9A1P20849 921 aa7.16□□□□□ -1.26
HMGN1P28-201ENST00000521340 ERICH6Q7L0X2 663 aa7.16□□□□□ -1.26
HMGN1P28-201ENST00000521340 PDE4DQ08499 809 aa7.15□□□□□ -1.26
HMGN1P28-201ENST00000521340 PHF14O94880 888 aa7.14□□□□□ -1.27
HMGN1P28-201ENST00000521340 PTPN5P54829 565 aa7.14□□□□□ -1.27
HMGN1P28-201ENST00000521340 TYW1BQ6NUM6 668 aa7.14□□□□□ -1.27
HMGN1P28-201ENST00000521340 PPP1R3GB7ZBB8 358 aa7.13□□□□□ -1.27
HMGN1P28-201ENST00000521340 PROX2Q3B8N5 592 aa7.13□□□□□ -1.27
HMGN1P28-201ENST00000521340 THSD4Q6ZMP0 1018 aa7.13□□□□□ -1.27
HMGN1P28-201ENST00000521340 KDM4CQ9H3R0 1056 aa7.13□□□□□ -1.27
HMGN1P28-201ENST00000521340 FECHP22830 423 aa7.12□□□□□ -1.27
HMGN1P28-201ENST00000521340 MRPL50Q8N5N7 158 aaKnown RBP7.12□□□□□ -1.27
HMGN1P28-201ENST00000521340 FBXW7Q969H0 707 aa7.12□□□□□ -1.27
HMGN1P28-201ENST00000521340 MINK1Q8N4C8 1332 aaPredicted RBP7.11□□□□□ -1.27
HMGN1P28-201ENST00000521340 IRF6O14896 467 aa7.11□□□□□ -1.27
HMGN1P28-201ENST00000521340 WNT2BQ93097 391 aa7.11□□□□□ -1.27
HMGN1P28-201ENST00000521340 GRXCR2A6NFK2 248 aa7.1□□□□□ -1.27
HMGN1P28-201ENST00000521340 C6orf132Q5T0Z8 1188 aa7.1□□□□□ -1.27
HMGN1P28-201ENST00000521340 KRI1Q8N9T8 703 aaKnown RBP7.1□□□□□ -1.27
HMGN1P28-201ENST00000521340 RABGEF1Q9UJ41 708 aa7.1□□□□□ -1.27
HMGN1P28-201ENST00000521340 PLEKHG3A1L390 1219 aa7.09□□□□□ -1.27
HMGN1P28-201ENST00000521340 GOLGA8CPA6NN73 597 aa7.09□□□□□ -1.27
HMGN1P28-201ENST00000521340 AMHR2Q16671 573 aa7.09□□□□□ -1.27
HMGN1P28-201ENST00000521340 C14orf37Q86TY3 774 aa7.09□□□□□ -1.27
HMGN1P28-201ENST00000521340 DDX12PQ92771 950 aa7.09□□□□□ -1.27
HMGN1P28-201ENST00000521340 EPAS1Q99814 870 aa7.09□□□□□ -1.27
HMGN1P28-201ENST00000521340 NBPF3Q9H094 633 aa7.09□□□□□ -1.27
HMGN1P28-201ENST00000521340 NPDC1Q9NQX5 325 aaPredicted RBP7.09□□□□□ -1.27
HMGN1P28-201ENST00000521340 MAP2K5Q13163 448 aa7.08□□□□□ -1.28
HMGN1P28-201ENST00000521340 IL27Q8NEV9 243 aa7.08□□□□□ -1.28
HMGN1P28-201ENST00000521340 FAM117AQ9C073 453 aa7.08□□□□□ -1.28
HMGN1P28-201ENST00000521340 GNPATO15228 680 aa7.07□□□□□ -1.28
HMGN1P28-201ENST00000521340 CCDC102AQ96A19 550 aa7.07□□□□□ -1.28
HMGN1P28-201ENST00000521340 RBM33Q96EV2 1170 aaKnown RBP7.07□□□□□ -1.28
HMGN1P28-201ENST00000521340 KIAA1468Q9P260 1216 aa7.07□□□□□ -1.28
HMGN1P28-201ENST00000521340 PTGDRQ13258 359 aa7.06□□□□□ -1.28
HMGN1P28-201ENST00000521340 HIC1Q14526 733 aa7.06□□□□□ -1.28
HMGN1P28-201ENST00000521340 PARP9Q8IXQ6 854 aa7.06□□□□□ -1.28
HMGN1P28-201ENST00000521340 NUTM2FA1L443 756 aa7.05□□□□□ -1.28
HMGN1P28-201ENST00000521340 ONECUT3O60422 494 aaPredicted RBP7.05□□□□□ -1.28
HMGN1P28-201ENST00000521340 TMUB1Q9BVT8 246 aa7.05□□□□□ -1.28
HMGN1P28-201ENST00000521340 TSR1Q2NL82 804 aaKnown RBP7.04□□□□□ -1.28
HMGN1P28-201ENST00000521340 LAPTM4BQ86VI4 370 aa7.04□□□□□ -1.28
HMGN1P28-201ENST00000521340 REPIN1Q9BWE0 567 aaKnown RBP7.04□□□□□ -1.28
HMGN1P28-201ENST00000521340 TRIM6-TRIM34B2RNG4 842 aa7.03□□□□□ -1.28
HMGN1P28-201ENST00000521340 FCHSD2O94868 740 aa7.03□□□□□ -1.28
HMGN1P28-201ENST00000521340 BCAMP50895 628 aa7.03□□□□□ -1.28
HMGN1P28-201ENST00000521340 EN1Q05925 392 aaPredicted RBP7.03□□□□□ -1.28
HMGN1P28-201ENST00000521340 IFFO2Q5TF58 517 aa7.03□□□□□ -1.28
HMGN1P28-201ENST00000521340 ANKK1Q8NFD2 765 aa7.02□□□□□ -1.29
HMGN1P28-201ENST00000521340 ZFRQ96KR1 1074 aaKnown RBP7.02□□□□□ -1.29
HMGN1P28-201ENST00000521340 SEPT9Q9UHD8 586 aaPredicted RBP7.02□□□□□ -1.29
HMGN1P28-201ENST00000521340 SOWAHBA6NEL2 793 aa7.01□□□□□ -1.29
HMGN1P28-201ENST00000521340 ARXQ96QS3 562 aa7.01□□□□□ -1.29
HMGN1P28-201ENST00000521340 TSKSQ9UJT2 592 aa7.01□□□□□ -1.29
HMGN1P28-201ENST00000521340 MAP3K7O43318 606 aa7□□□□□ -1.29
HMGN1P28-201ENST00000521340 PHOX2BQ99453 314 aa7□□□□□ -1.29
HMGN1P28-201ENST00000521340 CDHR5Q9HBB8 845 aa7□□□□□ -1.29
HMGN1P28-201ENST00000521340 DAXXQ9UER7 740 aaPredicted RBP6.99□□□□□ -1.29
HMGN1P28-201ENST00000521340 FAM198AQ9UFP1 575 aa6.99□□□□□ -1.29
HMGN1P28-201ENST00000521340 A0A0G2JS52 829 aa6.98□□□□□ -1.29
HMGN1P28-201ENST00000521340 C3orf80F5H4A9 247 aa6.98□□□□□ -1.29
HMGN1P28-201ENST00000521340 MS4A1P11836 297 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms