RNA–Protein interactions for RNA: ENST00000521147.1

CASC9-202, Transcript of cancer susceptibility 9, humanhuman

TSL 2

Gene CASC9, Length 731 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC9-202ENST00000521147 FOXD4L1Q9NU39 408 aa12.32□□□□□ -0.44
CASC9-202ENST00000521147 PLA2R1Q13018 1463 aa12.32□□□□□ -0.44
CASC9-202ENST00000521147 ARHGAP35Q9NRY4 1499 aa12.32□□□□□ -0.44
CASC9-202ENST00000521147 SAMD9LQ8IVG5 1584 aa12.31□□□□□ -0.44
CASC9-202ENST00000521147 CLIP1P30622 1438 aa12.3□□□□□ -0.44
CASC9-202ENST00000521147 ALKQ9UM73 1620 aa12.29□□□□□ -0.44
CASC9-202ENST00000521147 PTPRKQ15262 1439 aa12.29□□□□□ -0.44
CASC9-202ENST00000521147 FMN1Q68DA7 1419 aa12.29□□□□□ -0.44
CASC9-202ENST00000521147 PKD2Q13563 968 aa12.29□□□□□ -0.44
CASC9-202ENST00000521147 CDK11AQ9UQ88 783 aaPredicted RBP12.29□□□□□ -0.44
CASC9-202ENST00000521147 ATF5Q9Y2D1 282 aaPredicted RBP12.29□□□□□ -0.44
CASC9-202ENST00000521147 POLR1AO95602 1720 aaPredicted RBP12.28□□□□□ -0.44
CASC9-202ENST00000521147 SYCP2Q9BX26 1530 aa12.28□□□□□ -0.44
CASC9-202ENST00000521147 NEURL4Q96JN8 1562 aa12.28□□□□□ -0.44
CASC9-202ENST00000521147 DNMT1P26358 1616 aaKnown RBP12.28□□□□□ -0.44
CASC9-202ENST00000521147 EEA1Q15075 1411 aa12.28□□□□□ -0.44
CASC9-202ENST00000521147 ZNF777Q9ULD5 760 aaPredicted RBP12.27□□□□□ -0.45
CASC9-202ENST00000521147 PLXNC1O60486 1568 aa12.26□□□□□ -0.45
CASC9-202ENST00000521147 GGT6Q6P531 493 aa12.25□□□□□ -0.45
CASC9-202ENST00000521147 ZBTB12Q9Y330 459 aaPredicted RBP12.25□□□□□ -0.45
CASC9-202ENST00000521147 ATP7AQ04656 1500 aa12.25□□□□□ -0.45
CASC9-202ENST00000521147 TOM1O60784 492 aa12.24□□□□□ -0.45
CASC9-202ENST00000521147 UBTFP17480 764 aaKnown RBP12.24□□□□□ -0.45
CASC9-202ENST00000521147 HNRNPMP52272 730 aaKnown RBP eCLIP12.24□□□□□ -0.45
CASC9-202ENST00000521147 SHANK2Q9UPX8 1470 aa12.24□□□□□ -0.45
CASC9-202ENST00000521147 INO80Q9ULG1 1556 aaPredicted RBP12.23□□□□□ -0.45
CASC9-202ENST00000521147 CPS1P31327 1500 aa12.23□□□□□ -0.45
CASC9-202ENST00000521147 A2ML1A8K2U0 1454 aa12.23□□□□□ -0.45
CASC9-202ENST00000521147 SPAG9O60271 1321 aaKnown RBP12.23□□□□□ -0.45
CASC9-202ENST00000521147 HRCP23327 699 aa12.23□□□□□ -0.45
CASC9-202ENST00000521147 STRCP1A6NGW2 1772 aa12.23□□□□□ -0.45
CASC9-202ENST00000521147 VWDEQ8N2E2 1590 aa12.22□□□□□ -0.45
CASC9-202ENST00000521147 A2MP01023 1474 aa12.22□□□□□ -0.45
CASC9-202ENST00000521147 AKT1S1Q96B36 256 aa12.21□□□□□ -0.45
CASC9-202ENST00000521147 FBXO31Q5XUX0 539 aaPredicted RBP12.2□□□□□ -0.46
CASC9-202ENST00000521147 RGS17Q9UGC6 210 aaPredicted RBP12.2□□□□□ -0.46
CASC9-202ENST00000521147 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.18□□□□□ -0.46
CASC9-202ENST00000521147 GPATCH8Q9UKJ3 1502 aaKnown RBP12.18□□□□□ -0.46
CASC9-202ENST00000521147 TRIM26Q12899 539 aaPredicted RBP12.18□□□□□ -0.46
CASC9-202ENST00000521147 ADGBQ8N7X0 1667 aa12.17□□□□□ -0.46
CASC9-202ENST00000521147 CCDC18Q5T9S5 1454 aa12.16□□□□□ -0.46
CASC9-202ENST00000521147 SETD1AO15047 1707 aaKnown RBP12.16□□□□□ -0.46
CASC9-202ENST00000521147 TNRQ92752 1358 aa12.16□□□□□ -0.46
CASC9-202ENST00000521147 CASKIN1Q8WXD9 1431 aa12.15□□□□□ -0.46
CASC9-202ENST00000521147 NPHP4O75161 1426 aaPredicted RBP12.14□□□□□ -0.47
CASC9-202ENST00000521147 IQGAP1P46940 1657 aa12.14□□□□□ -0.47
CASC9-202ENST00000521147 PCGF6Q9BYE7 350 aa12.14□□□□□ -0.47
CASC9-202ENST00000521147 LRRC7Q96NW7 1537 aa12.14□□□□□ -0.47
CASC9-202ENST00000521147 RNF17Q9BXT8 1623 aaKnown RBP12.14□□□□□ -0.47
CASC9-202ENST00000521147 ZNF644Q9H582 1327 aaPredicted RBP12.12□□□□□ -0.47
CASC9-202ENST00000521147 LOC105371045A0A1W2PR82 267 aa12.12□□□□□ -0.47
CASC9-202ENST00000521147 KIAA1107Q9UPP5 1409 aa12.11□□□□□ -0.47
CASC9-202ENST00000521147 XIRP1Q702N8 1843 aaKnown RBP12.11□□□□□ -0.47
CASC9-202ENST00000521147 UGGT1Q9NYU2 1555 aa12.11□□□□□ -0.47
CASC9-202ENST00000521147 PZPP20742 1482 aa12.11□□□□□ -0.47
CASC9-202ENST00000521147 POTEAQ6S8J7 498 aa12.11□□□□□ -0.47
CASC9-202ENST00000521147 ANKLE2Q86XL3 938 aa12.11□□□□□ -0.47
CASC9-202ENST00000521147 REM2Q8IYK8 340 aaPredicted RBP12.11□□□□□ -0.47
CASC9-202ENST00000521147 CFDP1Q9UEE9 299 aaPredicted RBP12.11□□□□□ -0.47
CASC9-202ENST00000521147 DEPDC5O75140 1603 aa12.11□□□□□ -0.47
CASC9-202ENST00000521147 SYNMO15061 1565 aa12.09□□□□□ -0.47
CASC9-202ENST00000521147 MED14O60244 1454 aa12.09□□□□□ -0.47
CASC9-202ENST00000521147 ZEB1P37275 1124 aaPredicted RBP12.09□□□□□ -0.47
CASC9-202ENST00000521147 KDM5DQ9BY66 1539 aa12.09□□□□□ -0.47
CASC9-202ENST00000521147 ZC3H13Q5T200 1668 aaKnown RBP12.09□□□□□ -0.47
CASC9-202ENST00000521147 PLEKHH2Q8IVE3 1493 aa12.08□□□□□ -0.47
CASC9-202ENST00000521147 KIF3BO15066 747 aa12.08□□□□□ -0.48
CASC9-202ENST00000521147 FYCO1Q9BQS8 1478 aa12.08□□□□□ -0.48
CASC9-202ENST00000521147 CCNB3Q8WWL7 1395 aa12.07□□□□□ -0.48
CASC9-202ENST00000521147 TIAM1Q13009 1591 aa12.07□□□□□ -0.48
CASC9-202ENST00000521147 CFAP65Q6ZU64 1925 aaKnown RBP12.07□□□□□ -0.48
CASC9-202ENST00000521147 MBD5Q9P267 1494 aa12.07□□□□□ -0.48
CASC9-202ENST00000521147 FAM135AQ9P2D6 1515 aa12.06□□□□□ -0.48
CASC9-202ENST00000521147 DHX29Q7Z478 1369 aaKnown RBP12.06□□□□□ -0.48
CASC9-202ENST00000521147 MIA2Q96PC5 1412 aa12.06□□□□□ -0.48
CASC9-202ENST00000521147 THEMISQ8N1K5 641 aaPredicted RBP12.05□□□□□ -0.48
CASC9-202ENST00000521147 NLRP1Q9C000 1473 aa12.04□□□□□ -0.48
CASC9-202ENST00000521147 WASHC2CQ9Y4E1 1318 aa12.04□□□□□ -0.48
CASC9-202ENST00000521147 PIP4P2Q8N4L2 257 aa12.03□□□□□ -0.48
CASC9-202ENST00000521147 SP7Q8TDD2 431 aaPredicted RBP12.03□□□□□ -0.48
CASC9-202ENST00000521147 ZBTB22O15209 634 aa12.02□□□□□ -0.49
CASC9-202ENST00000521147 UBR1Q8IWV7 1749 aa12.02□□□□□ -0.49
CASC9-202ENST00000521147 RTEL1-TNFRSF6BF6WH68 1400 aa12.02□□□□□ -0.49
CASC9-202ENST00000521147 ROBO1Q9Y6N7 1651 aa12□□□□□ -0.49
CASC9-202ENST00000521147 CEP152O94986 1710 aa12□□□□□ -0.49
CASC9-202ENST00000521147 RBM33Q96EV2 1170 aaKnown RBP12□□□□□ -0.49
CASC9-202ENST00000521147 MTUS2Q5JR59 1369 aa12□□□□□ -0.49
CASC9-202ENST00000521147 ABCC3O15438 1527 aa11.98□□□□□ -0.49
CASC9-202ENST00000521147 ERVK-7P63135 1459 aa11.98□□□□□ -0.49
CASC9-202ENST00000521147 NCOA2Q15596 1464 aa11.98□□□□□ -0.49
CASC9-202ENST00000521147 CCDC141Q6ZP82 1450 aa11.98□□□□□ -0.49
CASC9-202ENST00000521147 SCAF11Q99590 1463 aaKnown RBP11.98□□□□□ -0.49
CASC9-202ENST00000521147 PITPNM1O00562 1244 aa11.98□□□□□ -0.49
CASC9-202ENST00000521147 LTKP29376 864 aa11.98□□□□□ -0.49
CASC9-202ENST00000521147 CAMSAP2Q08AD1 1489 aa11.97□□□□□ -0.49
CASC9-202ENST00000521147 EHBP1L1Q8N3D4 1523 aa11.96□□□□□ -0.5
CASC9-202ENST00000521147 FAM135BQ49AJ0 1406 aa11.95□□□□□ -0.5
CASC9-202ENST00000521147 MROH1Q8NDA8 1641 aa11.95□□□□□ -0.5
CASC9-202ENST00000521147 MAP3K1Q13233 1512 aa11.95□□□□□ -0.5
CASC9-202ENST00000521147 CEP162Q5TB80 1403 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms