RNA–Protein interactions for RNA: ENST00000521049.5

TRAM1-204, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 872 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-204ENST00000521049 FBXO31Q5XUX0 539 aaPredicted RBP26.36■■□□□ 1.81
TRAM1-204ENST00000521049 TNRQ92752 1358 aa26.33■■□□□ 1.81
TRAM1-204ENST00000521049 WASHC2CQ9Y4E1 1318 aa26.33■■□□□ 1.81
TRAM1-204ENST00000521049 DNMT1P26358 1616 aaKnown RBP26.32■■□□□ 1.8
TRAM1-204ENST00000521049 THEMISQ8N1K5 641 aaPredicted RBP26.3■■□□□ 1.8
TRAM1-204ENST00000521049 CCDC141Q6ZP82 1450 aa26.3■■□□□ 1.8
TRAM1-204ENST00000521049 ANKLE2Q86XL3 938 aa26.29■■□□□ 1.8
TRAM1-204ENST00000521049 TSPY4P0CV99 314 aa26.28■■□□□ 1.8
TRAM1-204ENST00000521049 TSPY10P0CW01 314 aa26.28■■□□□ 1.8
TRAM1-204ENST00000521049 PZPP20742 1482 aa26.28■■□□□ 1.8
TRAM1-204ENST00000521049 TOM1O60784 492 aa26.27■■□□□ 1.8
TRAM1-204ENST00000521049 FAM135AQ9P2D6 1515 aa26.27■■□□□ 1.8
TRAM1-204ENST00000521049 MIA2Q96PC5 1412 aa26.26■■□□□ 1.79
TRAM1-204ENST00000521049 NCOA2Q15596 1464 aa26.25■■□□□ 1.79
TRAM1-204ENST00000521049 KDM5DQ9BY66 1539 aa26.24■■□□□ 1.79
TRAM1-204ENST00000521049 CAMSAP2Q08AD1 1489 aa26.23■■□□□ 1.79
TRAM1-204ENST00000521049 SHANK2Q9UPX8 1470 aa26.23■■□□□ 1.79
TRAM1-204ENST00000521049 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.22■■□□□ 1.791e-6■□□□□ 9.9
TRAM1-204ENST00000521049 CPS1P31327 1500 aa26.22■■□□□ 1.79
TRAM1-204ENST00000521049 NLRP1Q9C000 1473 aa26.2■■□□□ 1.78
TRAM1-204ENST00000521049 HSPA1LP34931 641 aa26.2■■□□□ 1.78
TRAM1-204ENST00000521049 PIP4K2BP78356 416 aa26.2■■□□□ 1.78
TRAM1-204ENST00000521049 SCAF1Q9H7N4 1312 aaKnown RBP26.19■■□□□ 1.78
TRAM1-204ENST00000521049 NEURL4Q96JN8 1562 aa26.18■■□□□ 1.78
TRAM1-204ENST00000521049 MED14O60244 1454 aa26.15■■□□□ 1.78
TRAM1-204ENST00000521049 ARHGEF5Q12774 1597 aa26.15■■□□□ 1.78
TRAM1-204ENST00000521049 NPHP4O75161 1426 aaPredicted RBP26.14■■□□□ 1.77
TRAM1-204ENST00000521049 UGGT1Q9NYU2 1555 aa26.13■■□□□ 1.77
TRAM1-204ENST00000521049 POLR1AO95602 1720 aaPredicted RBP26.11■■□□□ 1.77
TRAM1-204ENST00000521049 VWDEQ8N2E2 1590 aa26.09■■□□□ 1.77
TRAM1-204ENST00000521049 DEPDC5O75140 1603 aa26.07■■□□□ 1.76
TRAM1-204ENST00000521049 LRRC9Q6ZRR7 1453 aa26.06■■□□□ 1.76
TRAM1-204ENST00000521049 ABCC3O15438 1527 aa26.04■■□□□ 1.76
TRAM1-204ENST00000521049 MAST1Q9Y2H9 1570 aa26.02■■□□□ 1.76
TRAM1-204ENST00000521049 KANK4Q5T7N3 995 aaPredicted RBP26.01■■□□□ 1.75
TRAM1-204ENST00000521049 VPS8Q8N3P4 1428 aa26.01■■□□□ 1.75
TRAM1-204ENST00000521049 RNF17Q9BXT8 1623 aaKnown RBP26.01■■□□□ 1.75
TRAM1-204ENST00000521049 ERVK-7P63135 1459 aa26■■□□□ 1.75
TRAM1-204ENST00000521049 MED1Q15648 1581 aaPredicted RBP25.99■■□□□ 1.75
TRAM1-204ENST00000521049 LRRC7Q96NW7 1537 aa25.97■■□□□ 1.75
TRAM1-204ENST00000521049 MYOM3Q5VTT5 1437 aa25.97■■□□□ 1.75
TRAM1-204ENST00000521049 ALKQ9UM73 1620 aa25.96■■□□□ 1.75
TRAM1-204ENST00000521049 IQGAP1P46940 1657 aa25.96■■□□□ 1.75
TRAM1-204ENST00000521049 ZC3H13Q5T200 1668 aaKnown RBP25.96■■□□□ 1.75
TRAM1-204ENST00000521049 EIF2AK4Q9P2K8 1649 aaKnown RBP25.95■■□□□ 1.74
TRAM1-204ENST00000521049 MAP3K1Q13233 1512 aa25.94■■□□□ 1.74
TRAM1-204ENST00000521049 TXNDC2Q86VQ3 553 aa25.94■■□□□ 1.74
TRAM1-204ENST00000521049 PHF23Q9BUL5 403 aaPredicted RBP25.94■■□□□ 1.74
TRAM1-204ENST00000521049 LTKP29376 864 aa25.93■■□□□ 1.74
TRAM1-204ENST00000521049 LOC105371045A0A1W2PR82 267 aa25.92■■□□□ 1.74
TRAM1-204ENST00000521049 DUOX2Q9NRD8 1548 aa25.92■■□□□ 1.74
TRAM1-204ENST00000521049 ARHGAP31Q2M1Z3 1444 aa25.91■■□□□ 1.74
TRAM1-204ENST00000521049 MROH1Q8NDA8 1641 aa25.91■■□□□ 1.74
TRAM1-204ENST00000521049 EID1Q9Y6B2 187 aa25.9■■□□□ 1.74
TRAM1-204ENST00000521049 SCAF11Q99590 1463 aaKnown RBP25.9■■□□□ 1.74
TRAM1-204ENST00000521049 ARHGAP23Q9P227 1491 aa25.88■■□□□ 1.73
TRAM1-204ENST00000521049 KIF15Q9NS87 1388 aa25.87■■□□□ 1.73
TRAM1-204ENST00000521049 RRP7BPQ9NSQ0 103 aa25.87■■□□□ 1.73
TRAM1-204ENST00000521049 STRCP1A6NGW2 1772 aa25.85■■□□□ 1.73
TRAM1-204ENST00000521049 SLIT1O75093 1534 aa25.85■■□□□ 1.73
TRAM1-204ENST00000521049 SYNMO15061 1565 aa25.84■■□□□ 1.73
TRAM1-204ENST00000521049 ERBINQ96RT1 1412 aa25.84■■□□□ 1.73
TRAM1-204ENST00000521049 SENP3Q9H4L4 574 aaPredicted RBP25.84■■□□□ 1.73
TRAM1-204ENST00000521049 UBR1Q8IWV7 1749 aa25.83■■□□□ 1.73
TRAM1-204ENST00000521049 ABCC5O15440 1437 aa25.83■■□□□ 1.73
TRAM1-204ENST00000521049 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.83■■□□□ 1.733e-7■■□□□ 12.8
TRAM1-204ENST00000521049 STAG3Q9UJ98 1225 aa25.81■■□□□ 1.72
TRAM1-204ENST00000521049 TMEM2Q9UHN6 1383 aa25.81■■□□□ 1.72
TRAM1-204ENST00000521049 CEP152O94986 1710 aa25.8■■□□□ 1.72
TRAM1-204ENST00000521049 PRDM15P57071 1507 aaPredicted RBP25.79■■□□□ 1.72
TRAM1-204ENST00000521049 KANK1Q14678 1352 aa25.79■■□□□ 1.72
TRAM1-204ENST00000521049 IDI1Q13907 227 aa25.77■■□□□ 1.72
TRAM1-204ENST00000521049 APLP2Q06481 763 aa25.76■■□□□ 1.71
TRAM1-204ENST00000521049 CFAP65Q6ZU64 1925 aaKnown RBP25.76■■□□□ 1.71
TRAM1-204ENST00000521049 FAM135BQ49AJ0 1406 aa25.74■■□□□ 1.71
TRAM1-204ENST00000521049 KCNA6P17658 529 aa25.74■■□□□ 1.71
TRAM1-204ENST00000521049 DAPK1P53355 1430 aa25.73■■□□□ 1.71
TRAM1-204ENST00000521049 RGS17Q9UGC6 210 aaPredicted RBP25.73■■□□□ 1.71
TRAM1-204ENST00000521049 ANKRD30AQ9BXX3 1397 aa25.71■■□□□ 1.71
TRAM1-204ENST00000521049 CHIC2Q9UKJ5 165 aa25.7■■□□□ 1.7
TRAM1-204ENST00000521049 TMEM94Q12767 1356 aa25.69■■□□□ 1.7
TRAM1-204ENST00000521049 LMTK2Q8IWU2 1503 aa25.69■■□□□ 1.7
TRAM1-204ENST00000521049 PTPN23Q9H3S7 1636 aa25.69■■□□□ 1.7
TRAM1-204ENST00000521049 PIK3C2BO00750 1634 aa25.68■■□□□ 1.7
TRAM1-204ENST00000521049 PROSER2Q86WR7 435 aaPredicted RBP25.68■■□□□ 1.7
TRAM1-204ENST00000521049 SLC26A8Q96RN1 970 aa25.68■■□□□ 1.7
TRAM1-204ENST00000521049 SLC52A1Q9NWF4 448 aa25.68■■□□□ 1.7
TRAM1-204ENST00000521049 EFCAB6Q5THR3 1501 aa25.67■■□□□ 1.7
TRAM1-204ENST00000521049 FGD6Q6ZV73 1430 aa25.66■■□□□ 1.7
TRAM1-204ENST00000521049 NOS1P29475 1434 aa25.64■■□□□ 1.7
TRAM1-204ENST00000521049 CROCC2H7BZ55 1655 aa25.64■■□□□ 1.69
TRAM1-204ENST00000521049 TET3O43151 1660 aa25.63■■□□□ 1.69
TRAM1-204ENST00000521049 KDM5AP29375 1690 aaKnown RBP25.63■■□□□ 1.69
TRAM1-204ENST00000521049 XIRP1Q702N8 1843 aaKnown RBP25.62■■□□□ 1.69
TRAM1-204ENST00000521049 RBM33Q96EV2 1170 aaKnown RBP25.6■■□□□ 1.69
TRAM1-204ENST00000521049 BCANQ96GW7 911 aa25.59■■□□□ 1.69
TRAM1-204ENST00000521049 HDGFP51858 240 aaKnown RBP25.58■■□□□ 1.69
TRAM1-204ENST00000521049 POTEAQ6S8J7 498 aa25.55■■□□□ 1.68
TRAM1-204ENST00000521049 SLAIN2Q9P270 581 aa25.55■■□□□ 1.68
TRAM1-204ENST00000521049 NKTRP30414 1462 aaKnown RBP25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms