RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 TSPY4P0CV99 314 aa18.36■□□□□ 0.53
MRPS28-206ENST00000520946 TSPY10P0CW01 314 aa18.36■□□□□ 0.53
MRPS28-206ENST00000520946 TCOF1Q13428 1488 aaKnown RBP18.36■□□□□ 0.53
MRPS28-206ENST00000520946 TNRQ92752 1358 aa18.36■□□□□ 0.53
MRPS28-206ENST00000520946 FBXO31Q5XUX0 539 aaPredicted RBP18.35■□□□□ 0.53
MRPS28-206ENST00000520946 THEMISQ8N1K5 641 aaPredicted RBP18.35■□□□□ 0.53
MRPS28-206ENST00000520946 EHBP1L1Q8N3D4 1523 aa18.34■□□□□ 0.53
MRPS28-206ENST00000520946 TIAM1Q13009 1591 aa18.32■□□□□ 0.52
MRPS28-206ENST00000520946 MBD5Q9P267 1494 aa18.32■□□□□ 0.52
MRPS28-206ENST00000520946 CEP162Q5TB80 1403 aa18.31■□□□□ 0.52
MRPS28-206ENST00000520946 DNMT1P26358 1616 aaKnown RBP18.31■□□□□ 0.52
MRPS28-206ENST00000520946 HSPA1LP34931 641 aa18.3■□□□□ 0.52
MRPS28-206ENST00000520946 CCDC141Q6ZP82 1450 aa18.3■□□□□ 0.52
MRPS28-206ENST00000520946 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.29■□□□□ 0.52
MRPS28-206ENST00000520946 PHF23Q9BUL5 403 aaPredicted RBP18.28■□□□□ 0.52
MRPS28-206ENST00000520946 CPS1P31327 1500 aa18.28■□□□□ 0.52
MRPS28-206ENST00000520946 KDM5DQ9BY66 1539 aa18.28■□□□□ 0.52
MRPS28-206ENST00000520946 PZPP20742 1482 aa18.26■□□□□ 0.51
MRPS28-206ENST00000520946 SHANK2Q9UPX8 1470 aa18.26■□□□□ 0.51
MRPS28-206ENST00000520946 FAM135AQ9P2D6 1515 aa18.26■□□□□ 0.51
MRPS28-206ENST00000520946 MIA2Q96PC5 1412 aa18.25■□□□□ 0.51
MRPS28-206ENST00000520946 SENP3Q9H4L4 574 aaPredicted RBP18.25■□□□□ 0.51
MRPS28-206ENST00000520946 CAMSAP2Q08AD1 1489 aa18.25■□□□□ 0.51
MRPS28-206ENST00000520946 NCOA2Q15596 1464 aa18.25■□□□□ 0.51
MRPS28-206ENST00000520946 POLR1AO95602 1720 aaPredicted RBP18.23■□□□□ 0.51
MRPS28-206ENST00000520946 NLRP1Q9C000 1473 aa18.23■□□□□ 0.51
MRPS28-206ENST00000520946 UGGT1Q9NYU2 1555 aa18.22■□□□□ 0.51
MRPS28-206ENST00000520946 NPHP4O75161 1426 aaPredicted RBP18.22■□□□□ 0.51
MRPS28-206ENST00000520946 NEURL4Q96JN8 1562 aa18.17■□□□□ 0.5
MRPS28-206ENST00000520946 MED1Q15648 1581 aaPredicted RBP18.15■□□□□ 0.5
MRPS28-206ENST00000520946 ARHGEF5Q12774 1597 aa18.14■□□□□ 0.49
MRPS28-206ENST00000520946 STAG3Q9UJ98 1225 aa18.14■□□□□ 0.49
MRPS28-206ENST00000520946 MED14O60244 1454 aa18.14■□□□□ 0.49
MRPS28-206ENST00000520946 EID1Q9Y6B2 187 aa18.13■□□□□ 0.49
MRPS28-206ENST00000520946 VWDEQ8N2E2 1590 aa18.12■□□□□ 0.49
MRPS28-206ENST00000520946 DEPDC5O75140 1603 aa18.12■□□□□ 0.49
MRPS28-206ENST00000520946 TXNDC2Q86VQ3 553 aa18.11■□□□□ 0.49
MRPS28-206ENST00000520946 IQGAP1P46940 1657 aa18.11■□□□□ 0.49
MRPS28-206ENST00000520946 APLP2Q06481 763 aa18.1■□□□□ 0.49
MRPS28-206ENST00000520946 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.1■□□□□ 0.491e-8■■■□□ 15.2
MRPS28-206ENST00000520946 ABCC3O15438 1527 aa18.09■□□□□ 0.49
MRPS28-206ENST00000520946 LRRC9Q6ZRR7 1453 aa18.08■□□□□ 0.49
MRPS28-206ENST00000520946 ZC3H13Q5T200 1668 aaKnown RBP18.08■□□□□ 0.48
MRPS28-206ENST00000520946 ERVK-7P63135 1459 aa18.07■□□□□ 0.48
MRPS28-206ENST00000520946 CFAP65Q6ZU64 1925 aaKnown RBP18.06■□□□□ 0.48
MRPS28-206ENST00000520946 RRP7BPQ9NSQ0 103 aa18.06■□□□□ 0.48
MRPS28-206ENST00000520946 LRRC7Q96NW7 1537 aa18.06■□□□□ 0.48
MRPS28-206ENST00000520946 MYOM3Q5VTT5 1437 aa18.06■□□□□ 0.48
MRPS28-206ENST00000520946 VPS8Q8N3P4 1428 aa18.06■□□□□ 0.48
MRPS28-206ENST00000520946 RNF17Q9BXT8 1623 aaKnown RBP18.05■□□□□ 0.48
MRPS28-206ENST00000520946 KANK1Q14678 1352 aa18.04■□□□□ 0.48
MRPS28-206ENST00000520946 SCAF11Q99590 1463 aaKnown RBP18.04■□□□□ 0.48
MRPS28-206ENST00000520946 KANK4Q5T7N3 995 aaPredicted RBP18.04■□□□□ 0.48
MRPS28-206ENST00000520946 EIF2AK4Q9P2K8 1649 aaKnown RBP18.04■□□□□ 0.48
MRPS28-206ENST00000520946 MAST1Q9Y2H9 1570 aa18.04■□□□□ 0.48
MRPS28-206ENST00000520946 DUOX2Q9NRD8 1548 aa18.03■□□□□ 0.48
MRPS28-206ENST00000520946 BCANQ96GW7 911 aa18.03■□□□□ 0.48
MRPS28-206ENST00000520946 LOC105371045A0A1W2PR82 267 aa18.02■□□□□ 0.48
MRPS28-206ENST00000520946 LTKP29376 864 aa18.02■□□□□ 0.48
MRPS28-206ENST00000520946 SYNMO15061 1565 aa18.01■□□□□ 0.47
MRPS28-206ENST00000520946 KIF15Q9NS87 1388 aa18.01■□□□□ 0.47
MRPS28-206ENST00000520946 CEP152O94986 1710 aa18■□□□□ 0.47
MRPS28-206ENST00000520946 UBR1Q8IWV7 1749 aa17.98■□□□□ 0.47
MRPS28-206ENST00000520946 STRCP1A6NGW2 1772 aa17.97■□□□□ 0.47
MRPS28-206ENST00000520946 PROSER2Q86WR7 435 aaPredicted RBP17.97■□□□□ 0.47
MRPS28-206ENST00000520946 CHIC2Q9UKJ5 165 aa17.96■□□□□ 0.47
MRPS28-206ENST00000520946 ALKQ9UM73 1620 aa17.96■□□□□ 0.47
MRPS28-206ENST00000520946 ARHGAP31Q2M1Z3 1444 aa17.96■□□□□ 0.47
MRPS28-206ENST00000520946 ERBINQ96RT1 1412 aa17.96■□□□□ 0.47
MRPS28-206ENST00000520946 MAP3K1Q13233 1512 aa17.95■□□□□ 0.46
MRPS28-206ENST00000520946 TMEM2Q9UHN6 1383 aa17.94■□□□□ 0.46
MRPS28-206ENST00000520946 MROH1Q8NDA8 1641 aa17.94■□□□□ 0.46
MRPS28-206ENST00000520946 SLIT1O75093 1534 aa17.93■□□□□ 0.46
MRPS28-206ENST00000520946 KCNA6P17658 529 aa17.93■□□□□ 0.46
MRPS28-206ENST00000520946 SLC26A8Q96RN1 970 aa17.93■□□□□ 0.46
MRPS28-206ENST00000520946 ARHGAP23Q9P227 1491 aa17.93■□□□□ 0.46
MRPS28-206ENST00000520946 ANKRD30AQ9BXX3 1397 aa17.92■□□□□ 0.46
MRPS28-206ENST00000520946 IDI1Q13907 227 aa17.92■□□□□ 0.46
MRPS28-206ENST00000520946 ABCC5O15440 1437 aa17.91■□□□□ 0.46
MRPS28-206ENST00000520946 PRDM15P57071 1507 aaPredicted RBP17.91■□□□□ 0.46
MRPS28-206ENST00000520946 TMEM94Q12767 1356 aa17.91■□□□□ 0.46
MRPS28-206ENST00000520946 FAM135BQ49AJ0 1406 aa17.89■□□□□ 0.46
MRPS28-206ENST00000520946 PPP1R15AO75807 674 aaPredicted RBP17.89■□□□□ 0.45
MRPS28-206ENST00000520946 HDGFP51858 240 aaKnown RBP17.89■□□□□ 0.45
MRPS28-206ENST00000520946 RBM33Q96EV2 1170 aaKnown RBP17.89■□□□□ 0.45
MRPS28-206ENST00000520946 PIK3C2BO00750 1634 aa17.89■□□□□ 0.45
MRPS28-206ENST00000520946 DAPK1P53355 1430 aa17.89■□□□□ 0.45
MRPS28-206ENST00000520946 EFCAB6Q5THR3 1501 aa17.88■□□□□ 0.45
MRPS28-206ENST00000520946 PTPN23Q9H3S7 1636 aa17.88■□□□□ 0.45
MRPS28-206ENST00000520946 SLC52A1Q9NWF4 448 aa17.87■□□□□ 0.45
MRPS28-206ENST00000520946 RGS17Q9UGC6 210 aaPredicted RBP17.87■□□□□ 0.45
MRPS28-206ENST00000520946 C14orf37Q86TY3 774 aa17.86■□□□□ 0.45
MRPS28-206ENST00000520946 MSH6P52701 1360 aa17.86■□□□□ 0.45
MRPS28-206ENST00000520946 FAM50AQ14320 339 aaKnown RBP17.85■□□□□ 0.45
MRPS28-206ENST00000520946 CROCC2H7BZ55 1655 aa17.83■□□□□ 0.45
MRPS28-206ENST00000520946 FGD6Q6ZV73 1430 aa17.83■□□□□ 0.45
MRPS28-206ENST00000520946 CHGAP10645 457 aaKnown RBP17.83■□□□□ 0.44
MRPS28-206ENST00000520946 SLAIN2Q9P270 581 aa17.82■□□□□ 0.44
MRPS28-206ENST00000520946 POTEAQ6S8J7 498 aa17.81■□□□□ 0.44
MRPS28-206ENST00000520946 XIRP1Q702N8 1843 aaKnown RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms