RNA–Protein interactions for RNA: ENST00000519932.5

LAMA4-213, Transcript of laminin subunit alpha 4, humanhuman

TSL 4

Gene LAMA4, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-213ENST00000519932 PTPRMP28827 1452 aa22.44■■□□□ 1.18
LAMA4-213ENST00000519932 RNF17Q9BXT8 1623 aaKnown RBP22.43■■□□□ 1.18
LAMA4-213ENST00000519932 ROCK1Q13464 1354 aa22.43■■□□□ 1.18
LAMA4-213ENST00000519932 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.41■■□□□ 1.18
LAMA4-213ENST00000519932 ANKRD50Q9ULJ7 1429 aa22.4■■□□□ 1.18
LAMA4-213ENST00000519932 CEP152O94986 1710 aa22.4■■□□□ 1.18
LAMA4-213ENST00000519932 C3P01024 1663 aa22.4■■□□□ 1.18
LAMA4-213ENST00000519932 MROH2AA6NES4 1674 aa22.39■■□□□ 1.18
LAMA4-213ENST00000519932 GCC2Q8IWJ2 1684 aa22.39■■□□□ 1.18
LAMA4-213ENST00000519932 CNTLNQ9NXG0 1405 aa22.39■■□□□ 1.17
LAMA4-213ENST00000519932 WASHC2CQ9Y4E1 1318 aa22.38■■□□□ 1.17
LAMA4-213ENST00000519932 KDM5DQ9BY66 1539 aa22.38■■□□□ 1.17
LAMA4-213ENST00000519932 ZC3H13Q5T200 1668 aaKnown RBP22.37■■□□□ 1.17
LAMA4-213ENST00000519932 DEPDC5O75140 1603 aa22.36■■□□□ 1.17
LAMA4-213ENST00000519932 CEBPAP49715 358 aaPredicted RBP22.36■■□□□ 1.17
LAMA4-213ENST00000519932 MROH1Q8NDA8 1641 aa22.35■■□□□ 1.17
LAMA4-213ENST00000519932 PPP6R1Q9UPN7 881 aa22.35■■□□□ 1.17
LAMA4-213ENST00000519932 KANK1Q14678 1352 aa22.35■■□□□ 1.17
LAMA4-213ENST00000519932 PRDM15P57071 1507 aaPredicted RBP22.33■■□□□ 1.17
LAMA4-213ENST00000519932 FAM135AQ9P2D6 1515 aa22.32■■□□□ 1.16
LAMA4-213ENST00000519932 CAMSAP1Q5T5Y3 1602 aa22.31■■□□□ 1.16
LAMA4-213ENST00000519932 ZMYM3Q14202 1370 aa22.3■■□□□ 1.16
LAMA4-213ENST00000519932 CFAP65Q6ZU64 1925 aaKnown RBP22.3■■□□□ 1.16
LAMA4-213ENST00000519932 ABCC3O15438 1527 aa22.3■■□□□ 1.16
LAMA4-213ENST00000519932 UNC13BO14795 1591 aa22.29■■□□□ 1.16
LAMA4-213ENST00000519932 NAIPQ13075 1403 aa22.29■■□□□ 1.16
LAMA4-213ENST00000519932 HFM1A2PYH4 1435 aa22.27■■□□□ 1.16
LAMA4-213ENST00000519932 PREX1Q8TCU6 1659 aa22.24■■□□□ 1.15
LAMA4-213ENST00000519932 TRIM52Q96A61 297 aa22.21■■□□□ 1.15
LAMA4-213ENST00000519932 NUP155O75694 1391 aa22.21■■□□□ 1.15
LAMA4-213ENST00000519932 PZPP20742 1482 aa22.21■■□□□ 1.15
LAMA4-213ENST00000519932 VWDEQ8N2E2 1590 aa22.21■■□□□ 1.15
LAMA4-213ENST00000519932 IQGAP3Q86VI3 1631 aa22.2■■□□□ 1.15
LAMA4-213ENST00000519932 SETD1BQ9UPS6 1966 aaKnown RBP22.2■■□□□ 1.14
LAMA4-213ENST00000519932 TET3O43151 1660 aa22.2■■□□□ 1.14
LAMA4-213ENST00000519932 FBXO31Q5XUX0 539 aaPredicted RBP22.18■■□□□ 1.14
LAMA4-213ENST00000519932 NPATQ14207 1427 aa22.17■■□□□ 1.14
LAMA4-213ENST00000519932 MYO3AQ8NEV4 1616 aa22.17■■□□□ 1.14
LAMA4-213ENST00000519932 EFCAB6Q5THR3 1501 aa22.16■■□□□ 1.14
LAMA4-213ENST00000519932 LMTK2Q8IWU2 1503 aa22.16■■□□□ 1.14
LAMA4-213ENST00000519932 UHRF1BP1Q6BDS2 1440 aa22.16■■□□□ 1.14
LAMA4-213ENST00000519932 SETD5Q9C0A6 1442 aa22.16■■□□□ 1.14
LAMA4-213ENST00000519932 TNRQ92752 1358 aa22.13■■□□□ 1.13
LAMA4-213ENST00000519932 E9PCH4 1651 aa22.13■■□□□ 1.13
LAMA4-213ENST00000519932 ERVK-7P63135 1459 aa22.12■■□□□ 1.13
LAMA4-213ENST00000519932 LMTK3Q96Q04 1460 aa22.11■■□□□ 1.13
LAMA4-213ENST00000519932 ARHGAP31Q2M1Z3 1444 aa22.11■■□□□ 1.13
LAMA4-213ENST00000519932 SPATA31D1Q6ZQQ2 1576 aa22.1■■□□□ 1.13
LAMA4-213ENST00000519932 RAB3GAP2Q9H2M9 1393 aa22.1■■□□□ 1.13
LAMA4-213ENST00000519932 TRIM26Q12899 539 aaPredicted RBP22.09■■□□□ 1.13
LAMA4-213ENST00000519932 ZNF142P52746 1687 aaPredicted RBP22.08■■□□□ 1.13
LAMA4-213ENST00000519932 CEP170BQ9Y4F5 1589 aaPredicted RBP22.08■■□□□ 1.12
LAMA4-213ENST00000519932 HSPA2P54652 639 aa22.07■■□□□ 1.12
LAMA4-213ENST00000519932 RPRD2Q5VT52 1461 aaKnown RBP22.06■■□□□ 1.12
LAMA4-213ENST00000519932 SLC4A1APQ9BWU0 796 aaKnown RBP22.05■■□□□ 1.12
LAMA4-213ENST00000519932 SPHKAPQ2M3C7 1700 aa22.04■■□□□ 1.12
LAMA4-213ENST00000519932 A2ML1A8K2U0 1454 aa22.03■■□□□ 1.12
LAMA4-213ENST00000519932 NLRP1Q9C000 1473 aa22.03■■□□□ 1.12
LAMA4-213ENST00000519932 SYNMO15061 1565 aa22.02■■□□□ 1.12
LAMA4-213ENST00000519932 ACIN1Q9UKV3 1341 aaKnown RBP22.02■■□□□ 1.12
LAMA4-213ENST00000519932 PIK3C2BO00750 1634 aa22■■□□□ 1.11
LAMA4-213ENST00000519932 STAG3Q9UJ98 1225 aa22■■□□□ 1.11
LAMA4-213ENST00000519932 UGGT1Q9NYU2 1555 aa21.99■■□□□ 1.11
LAMA4-213ENST00000519932 PKD2Q13563 968 aa21.99■■□□□ 1.11
LAMA4-213ENST00000519932 NOS1P29475 1434 aa21.97■■□□□ 1.11
LAMA4-213ENST00000519932 UBR1Q8IWV7 1749 aa21.97■■□□□ 1.11
LAMA4-213ENST00000519932 MPHOSPH9Q99550 1183 aa21.96■■□□□ 1.11
LAMA4-213ENST00000519932 MYO5BQ9ULV0 1848 aa21.95■■□□□ 1.1
LAMA4-213ENST00000519932 CHGAP10645 457 aaKnown RBP21.94■■□□□ 1.1
LAMA4-213ENST00000519932 FOXD1Q16676 465 aa21.94■■□□□ 1.1
LAMA4-213ENST00000519932 IDI1Q13907 227 aa21.92■■□□□ 1.1
LAMA4-213ENST00000519932 THEMISQ8N1K5 641 aaPredicted RBP21.92■■□□□ 1.1
LAMA4-213ENST00000519932 SLC52A1Q9NWF4 448 aa21.92■■□□□ 1.1
LAMA4-213ENST00000519932 POLR1AO95602 1720 aaPredicted RBP21.92■■□□□ 1.1
LAMA4-213ENST00000519932 STRCQ7RTU9 1775 aa21.91■■□□□ 1.1
LAMA4-213ENST00000519932 ADGRB3O60242 1522 aa21.9■■□□□ 1.1
LAMA4-213ENST00000519932 KIF1BO60333 1816 aa21.9■■□□□ 1.1
LAMA4-213ENST00000519932 KDM5AP29375 1690 aaKnown RBP21.89■■□□□ 1.1
LAMA4-213ENST00000519932 CLTCL1P53675 1640 aa21.89■■□□□ 1.09
LAMA4-213ENST00000519932 HRCP23327 699 aa21.89■■□□□ 1.09
LAMA4-213ENST00000519932 TRPM2O94759 1503 aa21.89■■□□□ 1.09
LAMA4-213ENST00000519932 NCKAP5LQ9HCH0 1330 aa21.86■■□□□ 1.09
LAMA4-213ENST00000519932 PLA2R1Q13018 1463 aa21.86■■□□□ 1.09
LAMA4-213ENST00000519932 PCGF6Q9BYE7 350 aa21.86■■□□□ 1.09
LAMA4-213ENST00000519932 PTPRTO14522 1441 aa21.86■■□□□ 1.09
LAMA4-213ENST00000519932 TMEM131LA2VDJ0 1609 aa21.85■■□□□ 1.09
LAMA4-213ENST00000519932 ANKLE2Q86XL3 938 aa21.82■■□□□ 1.08
LAMA4-213ENST00000519932 ZNF326Q5BKZ1 582 aaKnown RBP21.81■■□□□ 1.08
LAMA4-213ENST00000519932 EID1Q9Y6B2 187 aa21.81■■□□□ 1.08
LAMA4-213ENST00000519932 CCDC144AA2RUR9 1427 aa21.8■■□□□ 1.08
LAMA4-213ENST00000519932 DMRT2Q9Y5R5 561 aa21.8■■□□□ 1.08
LAMA4-213ENST00000519932 TXNDC2Q86VQ3 553 aa21.78■■□□□ 1.08
LAMA4-213ENST00000519932 SLIT1O75093 1534 aa21.78■■□□□ 1.08
LAMA4-213ENST00000519932 TMEM2Q9UHN6 1383 aa21.77■■□□□ 1.08
LAMA4-213ENST00000519932 IQGAP1P46940 1657 aa21.77■■□□□ 1.08
LAMA4-213ENST00000519932 PPP1R15AO75807 674 aaPredicted RBP21.77■■□□□ 1.08
LAMA4-213ENST00000519932 SCAF11Q99590 1463 aaKnown RBP21.77■■□□□ 1.07
LAMA4-213ENST00000519932 BCANQ96GW7 911 aa21.76■■□□□ 1.07
LAMA4-213ENST00000519932 NEURL4Q96JN8 1562 aa21.76■■□□□ 1.07
LAMA4-213ENST00000519932 SENP3Q9H4L4 574 aaPredicted RBP21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms