RNA–Protein interactions for RNA: ENST00000519894.1

FBXO28-204, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-204ENST00000519894 PTPN23Q9H3S7 1636 aa23.31■■□□□ 1.32
FBXO28-204ENST00000519894 FGD6Q6ZV73 1430 aa23.28■■□□□ 1.32
FBXO28-204ENST00000519894 ABCC5O15440 1437 aa23.26■■□□□ 1.31
FBXO28-204ENST00000519894 NPATQ14207 1427 aa23.26■■□□□ 1.31
FBXO28-204ENST00000519894 TCOF1Q13428 1488 aaKnown RBP23.26■■□□□ 1.31
FBXO28-204ENST00000519894 PTPRKQ15262 1439 aa23.24■■□□□ 1.31
FBXO28-204ENST00000519894 DAPK1P53355 1430 aa23.22■■□□□ 1.31
FBXO28-204ENST00000519894 SHANK2Q9UPX8 1470 aa23.21■■□□□ 1.31
FBXO28-204ENST00000519894 CROCC2H7BZ55 1655 aa23.21■■□□□ 1.31
FBXO28-204ENST00000519894 DNMT1P26358 1616 aaKnown RBP23.2■■□□□ 1.3
FBXO28-204ENST00000519894 WASHC2CQ9Y4E1 1318 aa23.19■■□□□ 1.3
FBXO28-204ENST00000519894 STRCQ7RTU9 1775 aa23.19■■□□□ 1.3
FBXO28-204ENST00000519894 KDM5DQ9BY66 1539 aa23.18■■□□□ 1.3
FBXO28-204ENST00000519894 FAM135AQ9P2D6 1515 aa23.18■■□□□ 1.3
FBXO28-204ENST00000519894 ILDR1Q86SU0 546 aaPredicted RBP23.18■■□□□ 1.3
FBXO28-204ENST00000519894 EIF2AK4Q9P2K8 1649 aaKnown RBP23.17■■□□□ 1.3
FBXO28-204ENST00000519894 DUOX2Q9NRD8 1548 aa23.17■■□□□ 1.3
FBXO28-204ENST00000519894 RNF17Q9BXT8 1623 aaKnown RBP23.16■■□□□ 1.3
FBXO28-204ENST00000519894 RRP7BPQ9NSQ0 103 aa23.16■■□□□ 1.3
FBXO28-204ENST00000519894 KIF15Q9NS87 1388 aa23.15■■□□□ 1.3
FBXO28-204ENST00000519894 FBXO31Q5XUX0 539 aaPredicted RBP23.14■■□□□ 1.29
FBXO28-204ENST00000519894 CHIC2Q9UKJ5 165 aa23.14■■□□□ 1.29
FBXO28-204ENST00000519894 MYO3AQ8NEV4 1616 aa23.13■■□□□ 1.29
FBXO28-204ENST00000519894 PZPP20742 1482 aa23.12■■□□□ 1.29
FBXO28-204ENST00000519894 FAM50AQ14320 339 aaKnown RBP23.12■■□□□ 1.29
FBXO28-204ENST00000519894 MROH1Q8NDA8 1641 aa23.11■■□□□ 1.29
FBXO28-204ENST00000519894 ZNF142P52746 1687 aaPredicted RBP23.09■■□□□ 1.29
FBXO28-204ENST00000519894 NCOA1Q15788 1441 aa23.09■■□□□ 1.29
FBXO28-204ENST00000519894 ERBINQ96RT1 1412 aa23.09■■□□□ 1.29
FBXO28-204ENST00000519894 ABCC3O15438 1527 aa23.09■■□□□ 1.29
FBXO28-204ENST00000519894 CAMSAP1Q5T5Y3 1602 aa23.09■■□□□ 1.29
FBXO28-204ENST00000519894 ANKRD30AQ9BXX3 1397 aa23.09■■□□□ 1.29
FBXO28-204ENST00000519894 CEP170BQ9Y4F5 1589 aaPredicted RBP23.09■■□□□ 1.29
FBXO28-204ENST00000519894 PPARGC1BQ86YN6 1023 aaKnown RBP23.08■■□□□ 1.29
FBXO28-204ENST00000519894 TNRQ92752 1358 aa23.07■■□□□ 1.28
FBXO28-204ENST00000519894 PTPRTO14522 1441 aa23.07■■□□□ 1.28
FBXO28-204ENST00000519894 ZC3H13Q5T200 1668 aaKnown RBP23.06■■□□□ 1.28
FBXO28-204ENST00000519894 A2ML1A8K2U0 1454 aa23.05■■□□□ 1.28
FBXO28-204ENST00000519894 ADGRL2O95490 1459 aa23.05■■□□□ 1.28
FBXO28-204ENST00000519894 CEP152O94986 1710 aa23.04■■□□□ 1.28
FBXO28-204ENST00000519894 NCKAP5LQ9HCH0 1330 aa23.03■■□□□ 1.28
FBXO28-204ENST00000519894 DCAF8L1A6NGE4 600 aa23.02■■□□□ 1.28
FBXO28-204ENST00000519894 PLA2R1Q13018 1463 aa23.02■■□□□ 1.28
FBXO28-204ENST00000519894 PRDM15P57071 1507 aaPredicted RBP23.02■■□□□ 1.28
FBXO28-204ENST00000519894 FBXO41Q8TF61 875 aa23.01■■□□□ 1.27
FBXO28-204ENST00000519894 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.01■■□□□ 1.27
FBXO28-204ENST00000519894 DEPDC5O75140 1603 aa23■■□□□ 1.27
FBXO28-204ENST00000519894 SPATA31D1Q6ZQQ2 1576 aa22.99■■□□□ 1.27
FBXO28-204ENST00000519894 CERKQ8TCT0 537 aa22.99■■□□□ 1.27
FBXO28-204ENST00000519894 PKD2Q13563 968 aa22.98■■□□□ 1.27
FBXO28-204ENST00000519894 ERVK-7P63135 1459 aa22.97■■□□□ 1.27
FBXO28-204ENST00000519894 NLRP1Q9C000 1473 aa22.97■■□□□ 1.27
FBXO28-204ENST00000519894 ARHGAP31Q2M1Z3 1444 aa22.95■■□□□ 1.26
FBXO28-204ENST00000519894 CFAP65Q6ZU64 1925 aaKnown RBP22.95■■□□□ 1.26
FBXO28-204ENST00000519894 KANK1Q14678 1352 aa22.94■■□□□ 1.26
FBXO28-204ENST00000519894 VWDEQ8N2E2 1590 aa22.93■■□□□ 1.26
FBXO28-204ENST00000519894 ANKRD50Q9ULJ7 1429 aa22.93■■□□□ 1.26
FBXO28-204ENST00000519894 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.92■■□□□ 1.26
FBXO28-204ENST00000519894 UGGT1Q9NYU2 1555 aa22.92■■□□□ 1.26
FBXO28-204ENST00000519894 THEMISQ8N1K5 641 aaPredicted RBP22.91■■□□□ 1.26
FBXO28-204ENST00000519894 LMTK2Q8IWU2 1503 aa22.91■■□□□ 1.26
FBXO28-204ENST00000519894 ROCK1Q13464 1354 aa22.89■■□□□ 1.26
FBXO28-204ENST00000519894 LTBP4Q8N2S1 1624 aa22.89■■□□□ 1.25
FBXO28-204ENST00000519894 ITGAEP38570 1179 aa22.88■■□□□ 1.25
FBXO28-204ENST00000519894 ANKLE2Q86XL3 938 aa22.86■■□□□ 1.25
FBXO28-204ENST00000519894 NEURL4Q96JN8 1562 aa22.85■■□□□ 1.25
FBXO28-204ENST00000519894 RNF39Q9H2S5 420 aa22.85■■□□□ 1.25
FBXO28-204ENST00000519894 POLR1AO95602 1720 aaPredicted RBP22.85■■□□□ 1.25
FBXO28-204ENST00000519894 ZNF335Q9H4Z2 1342 aaPredicted RBP22.83■■□□□ 1.25
FBXO28-204ENST00000519894 RRBP1Q9P2E9 1410 aaKnown RBP22.83■■□□□ 1.25
FBXO28-204ENST00000519894 UBR1Q8IWV7 1749 aa22.81■■□□□ 1.24
FBXO28-204ENST00000519894 EFCAB6Q5THR3 1501 aa22.81■■□□□ 1.24
FBXO28-204ENST00000519894 NOS1P29475 1434 aa22.79■■□□□ 1.24
FBXO28-204ENST00000519894 UNC13BO14795 1591 aa22.79■■□□□ 1.24
FBXO28-204ENST00000519894 MED14O60244 1454 aa22.79■■□□□ 1.24
FBXO28-204ENST00000519894 NPHP4O75161 1426 aaPredicted RBP22.77■■□□□ 1.24
FBXO28-204ENST00000519894 IDI1Q13907 227 aa22.77■■□□□ 1.24
FBXO28-204ENST00000519894 SYNMO15061 1565 aa22.76■■□□□ 1.23
FBXO28-204ENST00000519894 PIK3C2BO00750 1634 aa22.76■■□□□ 1.23
FBXO28-204ENST00000519894 TET3O43151 1660 aa22.75■■□□□ 1.23
FBXO28-204ENST00000519894 HOXD11P31277 338 aaPredicted RBP22.75■■□□□ 1.23
FBXO28-204ENST00000519894 RPRD2Q5VT52 1461 aaKnown RBP22.74■■□□□ 1.23
FBXO28-204ENST00000519894 ARHGAP23Q9P227 1491 aa22.74■■□□□ 1.23
FBXO28-204ENST00000519894 IQSEC2Q5JU85 1478 aa22.73■■□□□ 1.23
FBXO28-204ENST00000519894 SLIT1O75093 1534 aa22.72■■□□□ 1.23
FBXO28-204ENST00000519894 LTKP29376 864 aa22.72■■□□□ 1.23
FBXO28-204ENST00000519894 GCC2Q8IWJ2 1684 aa22.71■■□□□ 1.23
FBXO28-204ENST00000519894 TXNDC2Q86VQ3 553 aa22.71■■□□□ 1.23
FBXO28-204ENST00000519894 STAG3Q9UJ98 1225 aa22.71■■□□□ 1.23
FBXO28-204ENST00000519894 IQGAP1P46940 1657 aa22.71■■□□□ 1.23
FBXO28-204ENST00000519894 SLC52A1Q9NWF4 448 aa22.7■■□□□ 1.22
FBXO28-204ENST00000519894 NUP155O75694 1391 aa22.7■■□□□ 1.22
FBXO28-204ENST00000519894 SCAF11Q99590 1463 aaKnown RBP22.7■■□□□ 1.22
FBXO28-204ENST00000519894 IQGAP3Q86VI3 1631 aa22.7■■□□□ 1.22
FBXO28-204ENST00000519894 KDM5AP29375 1690 aaKnown RBP22.68■■□□□ 1.22
FBXO28-204ENST00000519894 TMEM2Q9UHN6 1383 aa22.68■■□□□ 1.22
FBXO28-204ENST00000519894 E9PCH4 1651 aa22.68■■□□□ 1.22
FBXO28-204ENST00000519894 EID1Q9Y6B2 187 aa22.66■■□□□ 1.22
FBXO28-204ENST00000519894 NAIPQ13075 1403 aa22.65■■□□□ 1.22
FBXO28-204ENST00000519894 ADGRB3O60242 1522 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms