RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 KIF3BO15066 747 aa18.05■□□□□ 0.48
HPS4-218ENST00000519774 PTPRMP28827 1452 aa18.04■□□□□ 0.48
HPS4-218ENST00000519774 GGT6Q6P531 493 aa18.04■□□□□ 0.48
HPS4-218ENST00000519774 EIF2AK4Q9P2K8 1649 aaKnown RBP18.04■□□□□ 0.48
HPS4-218ENST00000519774 NCOA1Q15788 1441 aa18.04■□□□□ 0.48
HPS4-218ENST00000519774 ESF1Q9H501 851 aaKnown RBP18.03■□□□□ 0.48
HPS4-218ENST00000519774 ERBINQ96RT1 1412 aa18.01■□□□□ 0.47
HPS4-218ENST00000519774 RNF17Q9BXT8 1623 aaKnown RBP18.01■□□□□ 0.47
HPS4-218ENST00000519774 CLTCQ00610 1675 aaKnown RBP18■□□□□ 0.47
HPS4-218ENST00000519774 ROCK1Q13464 1354 aa17.98■□□□□ 0.47
HPS4-218ENST00000519774 CNTLNQ9NXG0 1405 aa17.98■□□□□ 0.47
HPS4-218ENST00000519774 MROH1Q8NDA8 1641 aa17.97■□□□□ 0.47
HPS4-218ENST00000519774 MROH2AA6NES4 1674 aa17.96■□□□□ 0.47
HPS4-218ENST00000519774 KDM5DQ9BY66 1539 aa17.96■□□□□ 0.47
HPS4-218ENST00000519774 ANKRD50Q9ULJ7 1429 aa17.96■□□□□ 0.47
HPS4-218ENST00000519774 C3P01024 1663 aa17.96■□□□□ 0.47
HPS4-218ENST00000519774 CEBPAP49715 358 aaPredicted RBP17.94■□□□□ 0.46
HPS4-218ENST00000519774 DEPDC5O75140 1603 aa17.94■□□□□ 0.46
HPS4-218ENST00000519774 PRDM15P57071 1507 aaPredicted RBP17.93■□□□□ 0.46
HPS4-218ENST00000519774 FAM135AQ9P2D6 1515 aa17.93■□□□□ 0.46
HPS4-218ENST00000519774 CEP152O94986 1710 aa17.93■□□□□ 0.46
HPS4-218ENST00000519774 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.92■□□□□ 0.46
HPS4-218ENST00000519774 ZC3H13Q5T200 1668 aaKnown RBP17.92■□□□□ 0.46
HPS4-218ENST00000519774 GCC2Q8IWJ2 1684 aa17.92■□□□□ 0.46
HPS4-218ENST00000519774 WASHC2CQ9Y4E1 1318 aa17.92■□□□□ 0.46
HPS4-218ENST00000519774 ABCC3O15438 1527 aa17.91■□□□□ 0.46
HPS4-218ENST00000519774 ZMYM3Q14202 1370 aa17.9■□□□□ 0.46
HPS4-218ENST00000519774 KANK1Q14678 1352 aa17.89■□□□□ 0.45
HPS4-218ENST00000519774 UNC13BO14795 1591 aa17.87■□□□□ 0.45
HPS4-218ENST00000519774 CAMSAP1Q5T5Y3 1602 aa17.87■□□□□ 0.45
HPS4-218ENST00000519774 NAIPQ13075 1403 aa17.87■□□□□ 0.45
HPS4-218ENST00000519774 HFM1A2PYH4 1435 aa17.86■□□□□ 0.45
HPS4-218ENST00000519774 PREX1Q8TCU6 1659 aa17.84■□□□□ 0.45
HPS4-218ENST00000519774 VWDEQ8N2E2 1590 aa17.84■□□□□ 0.45
HPS4-218ENST00000519774 PZPP20742 1482 aa17.83■□□□□ 0.45
HPS4-218ENST00000519774 NPATQ14207 1427 aa17.81■□□□□ 0.44
HPS4-218ENST00000519774 LMTK2Q8IWU2 1503 aa17.81■□□□□ 0.44
HPS4-218ENST00000519774 SETD1BQ9UPS6 1966 aaKnown RBP17.8■□□□□ 0.44
HPS4-218ENST00000519774 CFAP65Q6ZU64 1925 aaKnown RBP17.8■□□□□ 0.44
HPS4-218ENST00000519774 UHRF1BP1Q6BDS2 1440 aa17.8■□□□□ 0.44
HPS4-218ENST00000519774 IQGAP3Q86VI3 1631 aa17.8■□□□□ 0.44
HPS4-218ENST00000519774 EFCAB6Q5THR3 1501 aa17.79■□□□□ 0.44
HPS4-218ENST00000519774 FBXO31Q5XUX0 539 aaPredicted RBP17.79■□□□□ 0.44
HPS4-218ENST00000519774 LMTK3Q96Q04 1460 aa17.79■□□□□ 0.44
HPS4-218ENST00000519774 TET3O43151 1660 aa17.79■□□□□ 0.44
HPS4-218ENST00000519774 MYO3AQ8NEV4 1616 aa17.79■□□□□ 0.44
HPS4-218ENST00000519774 NUP155O75694 1391 aa17.78■□□□□ 0.44
HPS4-218ENST00000519774 TNRQ92752 1358 aa17.77■□□□□ 0.43
HPS4-218ENST00000519774 ERVK-7P63135 1459 aa17.76■□□□□ 0.43
HPS4-218ENST00000519774 ARHGAP31Q2M1Z3 1444 aa17.76■□□□□ 0.43
HPS4-218ENST00000519774 SPATA31D1Q6ZQQ2 1576 aa17.75■□□□□ 0.43
HPS4-218ENST00000519774 TRIM52Q96A61 297 aa17.74■□□□□ 0.43
HPS4-218ENST00000519774 ZNF142P52746 1687 aaPredicted RBP17.74■□□□□ 0.43
HPS4-218ENST00000519774 SETD5Q9C0A6 1442 aa17.73■□□□□ 0.43
HPS4-218ENST00000519774 HSPA2P54652 639 aa17.73■□□□□ 0.43
HPS4-218ENST00000519774 E9PCH4 1651 aa17.72■□□□□ 0.43
HPS4-218ENST00000519774 CEP170BQ9Y4F5 1589 aaPredicted RBP17.72■□□□□ 0.43
HPS4-218ENST00000519774 A2ML1A8K2U0 1454 aa17.69■□□□□ 0.42
HPS4-218ENST00000519774 RPRD2Q5VT52 1461 aaKnown RBP17.69■□□□□ 0.42
HPS4-218ENST00000519774 RAB3GAP2Q9H2M9 1393 aa17.68■□□□□ 0.42
HPS4-218ENST00000519774 SYNMO15061 1565 aa17.68■□□□□ 0.42
HPS4-218ENST00000519774 NLRP1Q9C000 1473 aa17.68■□□□□ 0.42
HPS4-218ENST00000519774 NOS1P29475 1434 aa17.65■□□□□ 0.42
HPS4-218ENST00000519774 UGGT1Q9NYU2 1555 aa17.63■□□□□ 0.41
HPS4-218ENST00000519774 PIK3C2BO00750 1634 aa17.63■□□□□ 0.41
HPS4-218ENST00000519774 SLC4A1APQ9BWU0 796 aaKnown RBP17.63■□□□□ 0.41
HPS4-218ENST00000519774 SPHKAPQ2M3C7 1700 aa17.63■□□□□ 0.41
HPS4-218ENST00000519774 UBR1Q8IWV7 1749 aa17.61■□□□□ 0.41
HPS4-218ENST00000519774 TRIM26Q12899 539 aaPredicted RBP17.61■□□□□ 0.41
HPS4-218ENST00000519774 PKD2Q13563 968 aa17.61■□□□□ 0.41
HPS4-218ENST00000519774 STRCQ7RTU9 1775 aa17.59■□□□□ 0.41
HPS4-218ENST00000519774 PLA2R1Q13018 1463 aa17.58■□□□□ 0.41
HPS4-218ENST00000519774 ACIN1Q9UKV3 1341 aaKnown RBP17.58■□□□□ 0.4
HPS4-218ENST00000519774 IDI1Q13907 227 aa17.58■□□□□ 0.4
HPS4-218ENST00000519774 STAG3Q9UJ98 1225 aa17.58■□□□□ 0.4
HPS4-218ENST00000519774 ADGRB3O60242 1522 aa17.57■□□□□ 0.4
HPS4-218ENST00000519774 SLC52A1Q9NWF4 448 aa17.57■□□□□ 0.4
HPS4-218ENST00000519774 THEMISQ8N1K5 641 aaPredicted RBP17.56■□□□□ 0.4
HPS4-218ENST00000519774 MPHOSPH9Q99550 1183 aa17.56■□□□□ 0.4
HPS4-218ENST00000519774 TRPM2O94759 1503 aa17.56■□□□□ 0.4
HPS4-218ENST00000519774 PTPRTO14522 1441 aa17.55■□□□□ 0.4
HPS4-218ENST00000519774 POLR1AO95602 1720 aaPredicted RBP17.55■□□□□ 0.4
HPS4-218ENST00000519774 MYO5BQ9ULV0 1848 aa17.55■□□□□ 0.4
HPS4-218ENST00000519774 KDM5AP29375 1690 aaKnown RBP17.55■□□□□ 0.4
HPS4-218ENST00000519774 NCKAP5LQ9HCH0 1330 aa17.54■□□□□ 0.4
HPS4-218ENST00000519774 CHGAP10645 457 aaKnown RBP17.54■□□□□ 0.4
HPS4-218ENST00000519774 PPP4R3CPQ6ZMV5 832 aa17.54■□□□□ 0.4
HPS4-218ENST00000519774 CLTCL1P53675 1640 aa17.54■□□□□ 0.4
HPS4-218ENST00000519774 TMEM131LA2VDJ0 1609 aa17.52■□□□□ 0.4
HPS4-218ENST00000519774 HRCP23327 699 aa17.52■□□□□ 0.4
HPS4-218ENST00000519774 NEURL4Q96JN8 1562 aa17.5■□□□□ 0.39
HPS4-218ENST00000519774 SLIT1O75093 1534 aa17.5■□□□□ 0.39
HPS4-218ENST00000519774 ANKLE2Q86XL3 938 aa17.49■□□□□ 0.39
HPS4-218ENST00000519774 ARHGAP23Q9P227 1491 aa17.49■□□□□ 0.39
HPS4-218ENST00000519774 KIF1BO60333 1816 aa17.49■□□□□ 0.39
HPS4-218ENST00000519774 TMEM2Q9UHN6 1383 aa17.48■□□□□ 0.39
HPS4-218ENST00000519774 DMRT2Q9Y5R5 561 aa17.47■□□□□ 0.39
HPS4-218ENST00000519774 SCAF11Q99590 1463 aaKnown RBP17.47■□□□□ 0.39
HPS4-218ENST00000519774 CCDC144AA2RUR9 1427 aa17.46■□□□□ 0.39
HPS4-218ENST00000519774 TXNDC2Q86VQ3 553 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms