RNA–Protein interactions for RNA: ENST00000519770.1

IGHV3-52-201, Transcript of immunoglobulin heavy variable 3-52 (pseudogene), humanhuman

BASIC

Gene IGHV3-52, Length 353 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-52-201ENST00000519770 REREQ9P2R6 1566 aa25.84■■□□□ 1.73
IGHV3-52-201ENST00000519770 ARID4BQ4LE39 1312 aaPredicted RBP25.82■■□□□ 1.72
IGHV3-52-201ENST00000519770 SLC4A1APQ9BWU0 796 aaKnown RBP25.81■■□□□ 1.72
IGHV3-52-201ENST00000519770 GGT6Q6P531 493 aa25.8■■□□□ 1.72
IGHV3-52-201ENST00000519770 UNC13BO14795 1591 aa25.78■■□□□ 1.72
IGHV3-52-201ENST00000519770 MPHOSPH9Q99550 1183 aa25.78■■□□□ 1.72
IGHV3-52-201ENST00000519770 AGLP35573 1532 aa25.78■■□□□ 1.72
IGHV3-52-201ENST00000519770 DHX57Q6P158 1386 aaKnown RBP25.76■■□□□ 1.71
IGHV3-52-201ENST00000519770 BCORL1Q5H9F3 1711 aa25.75■■□□□ 1.71
IGHV3-52-201ENST00000519770 KDM5DQ9BY66 1539 aa25.73■■□□□ 1.71
IGHV3-52-201ENST00000519770 ESF1Q9H501 851 aaKnown RBP25.73■■□□□ 1.71
IGHV3-52-201ENST00000519770 PPP6R1Q9UPN7 881 aa25.73■■□□□ 1.71
IGHV3-52-201ENST00000519770 DEPDC5O75140 1603 aa25.73■■□□□ 1.71
IGHV3-52-201ENST00000519770 RNF17Q9BXT8 1623 aaKnown RBP25.73■■□□□ 1.71
IGHV3-52-201ENST00000519770 WASHC2CQ9Y4E1 1318 aa25.7■■□□□ 1.71
IGHV3-52-201ENST00000519770 PRDM15P57071 1507 aaPredicted RBP25.7■■□□□ 1.7
IGHV3-52-201ENST00000519770 FAM135AQ9P2D6 1515 aa25.7■■□□□ 1.7
IGHV3-52-201ENST00000519770 CLSPNQ9HAW4 1339 aa25.69■■□□□ 1.7
IGHV3-52-201ENST00000519770 MLECQ14165 292 aa25.69■■□□□ 1.7
IGHV3-52-201ENST00000519770 IQGAP3Q86VI3 1631 aa25.69■■□□□ 1.7
IGHV3-52-201ENST00000519770 PZPP20742 1482 aa25.68■■□□□ 1.7
IGHV3-52-201ENST00000519770 PKD2Q13563 968 aa25.67■■□□□ 1.7
IGHV3-52-201ENST00000519770 MROH1Q8NDA8 1641 aa25.63■■□□□ 1.69
IGHV3-52-201ENST00000519770 VWDEQ8N2E2 1590 aa25.61■■□□□ 1.69
IGHV3-52-201ENST00000519770 TET3O43151 1660 aa25.59■■□□□ 1.69
IGHV3-52-201ENST00000519770 ZC3H13Q5T200 1668 aaKnown RBP25.59■■□□□ 1.69
IGHV3-52-201ENST00000519770 LMTK2Q8IWU2 1503 aa25.58■■□□□ 1.69
IGHV3-52-201ENST00000519770 ABCC3O15438 1527 aa25.58■■□□□ 1.68
IGHV3-52-201ENST00000519770 FOXD1Q16676 465 aa25.57■■□□□ 1.68
IGHV3-52-201ENST00000519770 SIGLEC1Q9BZZ2 1709 aa25.57■■□□□ 1.68
IGHV3-52-201ENST00000519770 CEP152O94986 1710 aa25.56■■□□□ 1.68
IGHV3-52-201ENST00000519770 CNTLNQ9NXG0 1405 aa25.54■■□□□ 1.68
IGHV3-52-201ENST00000519770 ZEB1P37275 1124 aaPredicted RBP25.53■■□□□ 1.68
IGHV3-52-201ENST00000519770 EFCAB6Q5THR3 1501 aa25.53■■□□□ 1.68
IGHV3-52-201ENST00000519770 RPRD2Q5VT52 1461 aaKnown RBP25.51■■□□□ 1.67
IGHV3-52-201ENST00000519770 CAMSAP1Q5T5Y3 1602 aa25.5■■□□□ 1.67
IGHV3-52-201ENST00000519770 ANKRD30BQ9BXX2 1392 aa25.49■■□□□ 1.67
IGHV3-52-201ENST00000519770 ARHGAP31Q2M1Z3 1444 aa25.48■■□□□ 1.67
IGHV3-52-201ENST00000519770 NEUROD1Q13562 356 aa25.48■■□□□ 1.67
IGHV3-52-201ENST00000519770 E9PCH4 1651 aa25.48■■□□□ 1.67
IGHV3-52-201ENST00000519770 CLTCQ00610 1675 aaKnown RBP25.48■■□□□ 1.67
IGHV3-52-201ENST00000519770 CCDC144AA2RUR9 1427 aa25.44■■□□□ 1.66
IGHV3-52-201ENST00000519770 NPATQ14207 1427 aa25.44■■□□□ 1.66
IGHV3-52-201ENST00000519770 ZMYM3Q14202 1370 aa25.44■■□□□ 1.66
IGHV3-52-201ENST00000519770 SIN3AQ96ST3 1273 aa25.43■■□□□ 1.66
IGHV3-52-201ENST00000519770 FER1L4A9Z1Z3 1794 aa25.42■■□□□ 1.66
IGHV3-52-201ENST00000519770 MROH2AA6NES4 1674 aa25.39■■□□□ 1.66
IGHV3-52-201ENST00000519770 PTPRTO14522 1441 aa25.39■■□□□ 1.66
IGHV3-52-201ENST00000519770 SPHKAPQ2M3C7 1700 aa25.39■■□□□ 1.65
IGHV3-52-201ENST00000519770 TIMELESSQ9UNS1 1208 aa25.38■■□□□ 1.65
IGHV3-52-201ENST00000519770 TONSLQ96HA7 1378 aa25.38■■□□□ 1.65
IGHV3-52-201ENST00000519770 TRPM2O94759 1503 aa25.37■■□□□ 1.65
IGHV3-52-201ENST00000519770 CFAP65Q6ZU64 1925 aaKnown RBP25.35■■□□□ 1.65
IGHV3-52-201ENST00000519770 SLC52A1Q9NWF4 448 aa25.34■■□□□ 1.65
IGHV3-52-201ENST00000519770 PLA2R1Q13018 1463 aa25.34■■□□□ 1.65
IGHV3-52-201ENST00000519770 ADAMTSL3P82987 1691 aa25.33■■□□□ 1.65
IGHV3-52-201ENST00000519770 NOS1P29475 1434 aa25.33■■□□□ 1.65
IGHV3-52-201ENST00000519770 PLPPR3Q6T4P5 718 aa25.33■■□□□ 1.65
IGHV3-52-201ENST00000519770 MADDQ8WXG6 1647 aa25.33■■□□□ 1.65
IGHV3-52-201ENST00000519770 ERVK-7P63135 1459 aa25.33■■□□□ 1.65
IGHV3-52-201ENST00000519770 FBXO31Q5XUX0 539 aaPredicted RBP25.32■■□□□ 1.64
IGHV3-52-201ENST00000519770 PREX1Q8TCU6 1659 aa25.31■■□□□ 1.64
IGHV3-52-201ENST00000519770 RIMS1Q86UR5 1692 aaKnown RBP25.3■■□□□ 1.64
IGHV3-52-201ENST00000519770 CHGAP10645 457 aaKnown RBP25.28■■□□□ 1.64
IGHV3-52-201ENST00000519770 CEBPAP49715 358 aaPredicted RBP25.27■■□□□ 1.64
IGHV3-52-201ENST00000519770 STAG3Q9UJ98 1225 aa25.27■■□□□ 1.64
IGHV3-52-201ENST00000519770 TNRQ92752 1358 aa25.27■■□□□ 1.64
IGHV3-52-201ENST00000519770 SPATA31D1Q6ZQQ2 1576 aa25.27■■□□□ 1.64
IGHV3-52-201ENST00000519770 C3P01024 1663 aa25.25■■□□□ 1.63
IGHV3-52-201ENST00000519770 CLTCL1P53675 1640 aa25.24■■□□□ 1.63
IGHV3-52-201ENST00000519770 RGL3Q3MIN7 710 aa25.23■■□□□ 1.63
IGHV3-52-201ENST00000519770 SYNMO15061 1565 aa25.22■■□□□ 1.63
IGHV3-52-201ENST00000519770 KIF1BO60333 1816 aa25.22■■□□□ 1.63
IGHV3-52-201ENST00000519770 IDI1Q13907 227 aa25.22■■□□□ 1.63
IGHV3-52-201ENST00000519770 ZNF326Q5BKZ1 582 aaKnown RBP25.21■■□□□ 1.63
IGHV3-52-201ENST00000519770 UGGT1Q9NYU2 1555 aa25.2■■□□□ 1.62
IGHV3-52-201ENST00000519770 L3MBTL2Q969R5 705 aa25.19■■□□□ 1.62
IGHV3-52-201ENST00000519770 PIK3C2BO00750 1634 aa25.18■■□□□ 1.62
IGHV3-52-201ENST00000519770 PTPRMP28827 1452 aa25.17■■□□□ 1.62
IGHV3-52-201ENST00000519770 NLRP1Q9C000 1473 aa25.16■■□□□ 1.62
IGHV3-52-201ENST00000519770 DCAF11Q8TEB1 546 aa25.16■■□□□ 1.62
IGHV3-52-201ENST00000519770 NEURL4Q96JN8 1562 aa25.15■■□□□ 1.62
IGHV3-52-201ENST00000519770 STAC3Q96MF2 364 aa25.15■■□□□ 1.62
IGHV3-52-201ENST00000519770 SPATA31E1Q6ZUB1 1445 aa25.14■■□□□ 1.62
IGHV3-52-201ENST00000519770 RPGRIP1LQ68CZ1 1315 aa25.13■■□□□ 1.61
IGHV3-52-201ENST00000519770 KDM2AQ9Y2K7 1162 aa25.13■■□□□ 1.61
IGHV3-52-201ENST00000519770 PPP1R15AO75807 674 aaPredicted RBP25.12■■□□□ 1.61
IGHV3-52-201ENST00000519770 HDGFP51858 240 aaKnown RBP25.1■■□□□ 1.61
IGHV3-52-201ENST00000519770 ADGRB3O60242 1522 aa25.1■■□□□ 1.61
IGHV3-52-201ENST00000519770 KDM4FA0A1W2PPD8 638 aa25.09■■□□□ 1.61
IGHV3-52-201ENST00000519770 SETD1BQ9UPS6 1966 aaKnown RBP25.08■■□□□ 1.61
IGHV3-52-201ENST00000519770 TMEM131LA2VDJ0 1609 aa25.06■■□□□ 1.6
IGHV3-52-201ENST00000519770 VGFO15240 615 aaPredicted RBP25.05■■□□□ 1.6
IGHV3-52-201ENST00000519770 THEMISQ8N1K5 641 aaPredicted RBP25.05■■□□□ 1.6
IGHV3-52-201ENST00000519770 A2ML1A8K2U0 1454 aa25.03■■□□□ 1.6
IGHV3-52-201ENST00000519770 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.03■■□□□ 1.6
IGHV3-52-201ENST00000519770 MYO3AQ8NEV4 1616 aa25.03■■□□□ 1.6
IGHV3-52-201ENST00000519770 KDM5AP29375 1690 aaKnown RBP25.03■■□□□ 1.6
IGHV3-52-201ENST00000519770 UHRF1BP1Q6BDS2 1440 aa25.03■■□□□ 1.6
IGHV3-52-201ENST00000519770 EID1Q9Y6B2 187 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms