RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 RALGAPBQ86X10 1494 aa11.76□□□□□ -0.53
HMGB4-203ENST00000519684 SPATA31E1Q6ZUB1 1445 aa11.75□□□□□ -0.53
HMGB4-203ENST00000519684 ADGRL1O94910 1474 aa11.75□□□□□ -0.53
HMGB4-203ENST00000519684 ATP7AQ04656 1500 aa11.75□□□□□ -0.53
HMGB4-203ENST00000519684 INO80Q9ULG1 1556 aaPredicted RBP11.75□□□□□ -0.53
HMGB4-203ENST00000519684 CFAP74Q9C0B2 1584 aa11.75□□□□□ -0.53
HMGB4-203ENST00000519684 KDM5CP41229 1560 aa11.74□□□□□ -0.53
HMGB4-203ENST00000519684 USP47Q96K76 1375 aa11.74□□□□□ -0.53
HMGB4-203ENST00000519684 AFAP1Q8N556 730 aa11.73□□□□□ -0.53
HMGB4-203ENST00000519684 SCAPERQ9BY12 1400 aa11.72□□□□□ -0.53
HMGB4-203ENST00000519684 DCAF11Q8TEB1 546 aa11.72□□□□□ -0.53
HMGB4-203ENST00000519684 MYT1LQ9UL68 1186 aa11.72□□□□□ -0.53
HMGB4-203ENST00000519684 KDM2AQ9Y2K7 1162 aa11.72□□□□□ -0.53
HMGB4-203ENST00000519684 DEPDC5O75140 1603 aa11.72□□□□□ -0.53
HMGB4-203ENST00000519684 EIF2AK4Q9P2K8 1649 aaKnown RBP11.71□□□□□ -0.54
HMGB4-203ENST00000519684 ATP10AO60312 1499 aa11.7□□□□□ -0.54
HMGB4-203ENST00000519684 PLA2R1Q13018 1463 aa11.7□□□□□ -0.54
HMGB4-203ENST00000519684 KIF7Q2M1P5 1343 aa11.7□□□□□ -0.54
HMGB4-203ENST00000519684 C11orf95C9JLR9 678 aaPredicted RBP11.7□□□□□ -0.54
HMGB4-203ENST00000519684 CARD11Q9BXL7 1154 aa11.7□□□□□ -0.54
HMGB4-203ENST00000519684 KANK1Q14678 1352 aa11.7□□□□□ -0.54
HMGB4-203ENST00000519684 E9PCH4 1651 aa11.69□□□□□ -0.54
HMGB4-203ENST00000519684 TRPM1Q7Z4N2 1603 aa11.69□□□□□ -0.54
HMGB4-203ENST00000519684 TET3O43151 1660 aa11.68□□□□□ -0.54
HMGB4-203ENST00000519684 ZNF518AQ6AHZ1 1483 aa11.68□□□□□ -0.54
HMGB4-203ENST00000519684 CD109Q6YHK3 1445 aa11.68□□□□□ -0.54
HMGB4-203ENST00000519684 BCORL1Q5H9F3 1711 aa11.68□□□□□ -0.54
HMGB4-203ENST00000519684 ROCK2O75116 1388 aaKnown RBP11.68□□□□□ -0.54
HMGB4-203ENST00000519684 SPHKAPQ2M3C7 1700 aa11.67□□□□□ -0.54
HMGB4-203ENST00000519684 PRAG1Q86YV5 1406 aa11.67□□□□□ -0.54
HMGB4-203ENST00000519684 ARID4BQ4LE39 1312 aaPredicted RBP11.67□□□□□ -0.54
HMGB4-203ENST00000519684 A2MP01023 1474 aa11.67□□□□□ -0.54
HMGB4-203ENST00000519684 RGL3Q3MIN7 710 aa11.66□□□□□ -0.54
HMGB4-203ENST00000519684 KIDINS220Q9ULH0 1771 aa11.66□□□□□ -0.54
HMGB4-203ENST00000519684 TRPM2O94759 1503 aa11.66□□□□□ -0.54
HMGB4-203ENST00000519684 DHX29Q7Z478 1369 aaKnown RBP11.65□□□□□ -0.54
HMGB4-203ENST00000519684 LAMC1P11047 1609 aa11.65□□□□□ -0.54
HMGB4-203ENST00000519684 PRDM15P57071 1507 aaPredicted RBP11.65□□□□□ -0.54
HMGB4-203ENST00000519684 CEP152O94986 1710 aa11.65□□□□□ -0.54
HMGB4-203ENST00000519684 VWDEQ8N2E2 1590 aa11.64□□□□□ -0.55
HMGB4-203ENST00000519684 POLR3GLQ9BT43 218 aa11.64□□□□□ -0.55
HMGB4-203ENST00000519684 KIF3BO15066 747 aa11.64□□□□□ -0.55
HMGB4-203ENST00000519684 POGZQ7Z3K3 1410 aa11.63□□□□□ -0.55
HMGB4-203ENST00000519684 HECW2Q9P2P5 1572 aa11.63□□□□□ -0.55
HMGB4-203ENST00000519684 MROH1Q8NDA8 1641 aa11.62□□□□□ -0.55
HMGB4-203ENST00000519684 PRKRIP1Q9H875 184 aaPredicted RBP11.61□□□□□ -0.55
HMGB4-203ENST00000519684 PTPRTO14522 1441 aa11.61□□□□□ -0.55
HMGB4-203ENST00000519684 NEO1Q92859 1461 aa11.61□□□□□ -0.55
HMGB4-203ENST00000519684 CLTCL1P53675 1640 aa11.61□□□□□ -0.55
HMGB4-203ENST00000519684 ST20-MTHFSA0A0A6YYL1 179 aa11.61□□□□□ -0.55
HMGB4-203ENST00000519684 RNF17Q9BXT8 1623 aaKnown RBP11.6□□□□□ -0.55
HMGB4-203ENST00000519684 GPRASP1Q5JY77 1395 aa11.6□□□□□ -0.55
HMGB4-203ENST00000519684 MLH3Q9UHC1 1453 aa11.6□□□□□ -0.55
HMGB4-203ENST00000519684 EFCAB6Q5THR3 1501 aa11.59□□□□□ -0.55
HMGB4-203ENST00000519684 MADDQ8WXG6 1647 aa11.58□□□□□ -0.56
HMGB4-203ENST00000519684 MAP3K4Q9Y6R4 1608 aa11.58□□□□□ -0.56
HMGB4-203ENST00000519684 LMTK2Q8IWU2 1503 aa11.58□□□□□ -0.56
HMGB4-203ENST00000519684 STAC3Q96MF2 364 aa11.58□□□□□ -0.56
HMGB4-203ENST00000519684 NEURL4Q96JN8 1562 aa11.57□□□□□ -0.56
HMGB4-203ENST00000519684 PPRC1Q5VV67 1664 aaKnown RBP11.57□□□□□ -0.56
HMGB4-203ENST00000519684 RIMBP3CA6NJZ7 1639 aa11.57□□□□□ -0.56
HMGB4-203ENST00000519684 RIMBP3BA6NNM3 1639 aa11.57□□□□□ -0.56
HMGB4-203ENST00000519684 RIMBP3Q9UFD9 1639 aa11.57□□□□□ -0.56
HMGB4-203ENST00000519684 KIF1BO60333 1816 aa11.57□□□□□ -0.56
HMGB4-203ENST00000519684 ABCA6Q8N139 1617 aa11.57□□□□□ -0.56
HMGB4-203ENST00000519684 NBPF1Q3BBV0 1214 aa11.57□□□□□ -0.56
HMGB4-203ENST00000519684 MRS2Q9HD23 443 aa11.57□□□□□ -0.56
HMGB4-203ENST00000519684 HNRNPUQ00839 825 aaKnown RBP eCLIP11.56□□□□□ -0.56
HMGB4-203ENST00000519684 GLI2P10070 1586 aa11.55□□□□□ -0.56
HMGB4-203ENST00000519684 FRMPD1Q5SYB0 1578 aa11.55□□□□□ -0.56
HMGB4-203ENST00000519684 CYB5RLQ6IPT4 315 aa11.54□□□□□ -0.56
HMGB4-203ENST00000519684 RICTORQ6R327 1708 aa11.54□□□□□ -0.56
HMGB4-203ENST00000519684 IQGAP1P46940 1657 aa11.53□□□□□ -0.56
HMGB4-203ENST00000519684 COL17A1Q9UMD9 1497 aaPredicted RBP11.53□□□□□ -0.56
HMGB4-203ENST00000519684 KIAA1210Q9ULL0 1709 aa11.53□□□□□ -0.56
HMGB4-203ENST00000519684 SUPT16HQ9Y5B9 1047 aaKnown RBP11.53□□□□□ -0.56
HMGB4-203ENST00000519684 CCDC184Q52MB2 194 aa11.52□□□□□ -0.57
HMGB4-203ENST00000519684 DIP2CQ9Y2E4 1556 aa11.52□□□□□ -0.57
HMGB4-203ENST00000519684 FAM9BQ8IZU0 186 aa11.52□□□□□ -0.57
HMGB4-203ENST00000519684 UGGT1Q9NYU2 1555 aa11.52□□□□□ -0.57
HMGB4-203ENST00000519684 KTN1Q86UP2 1357 aaKnown RBP11.51□□□□□ -0.57
HMGB4-203ENST00000519684 NEFLP07196 543 aa11.51□□□□□ -0.57
HMGB4-203ENST00000519684 TMF1P82094 1093 aa11.51□□□□□ -0.57
HMGB4-203ENST00000519684 MYOM2P54296 1465 aa11.51□□□□□ -0.57
HMGB4-203ENST00000519684 IFT172Q9UG01 1749 aa11.51□□□□□ -0.57
HMGB4-203ENST00000519684 RAPGEF3O95398 923 aa11.51□□□□□ -0.57
HMGB4-203ENST00000519684 CNGB1Q14028 1251 aaPredicted RBP11.51□□□□□ -0.57
HMGB4-203ENST00000519684 GGT6Q6P531 493 aa11.51□□□□□ -0.57
HMGB4-203ENST00000519684 CAMSAP1Q5T5Y3 1602 aa11.5□□□□□ -0.57
HMGB4-203ENST00000519684 MROH2AA6NES4 1674 aa11.5□□□□□ -0.57
HMGB4-203ENST00000519684 ABCC3O15438 1527 aa11.5□□□□□ -0.57
HMGB4-203ENST00000519684 SCAF11Q99590 1463 aaKnown RBP11.5□□□□□ -0.57
HMGB4-203ENST00000519684 DIP2BQ9P265 1576 aa11.49□□□□□ -0.57
HMGB4-203ENST00000519684 WASHC2CQ9Y4E1 1318 aa11.49□□□□□ -0.57
HMGB4-203ENST00000519684 ZC3H13Q5T200 1668 aaKnown RBP11.49□□□□□ -0.57
HMGB4-203ENST00000519684 EIF3AQ14152 1382 aaKnown RBP11.49□□□□□ -0.57
HMGB4-203ENST00000519684 DISP3Q9P2K9 1392 aa11.49□□□□□ -0.57
HMGB4-203ENST00000519684 TESK2Q96S53 571 aa11.48□□□□□ -0.57
HMGB4-203ENST00000519684 ADGRB3O60242 1522 aa11.48□□□□□ -0.57
HMGB4-203ENST00000519684 RALBP1Q15311 655 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms