RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 AGLP35573 1532 aa21.15■□□□□ 0.98
SDC2-203ENST00000519587 RNF17Q9BXT8 1623 aaKnown RBP21.13■□□□□ 0.97
SDC2-203ENST00000519587 ACIN1Q9UKV3 1341 aaKnown RBP21.12■□□□□ 0.97
SDC2-203ENST00000519587 DEPDC5O75140 1603 aa21.11■□□□□ 0.97
SDC2-203ENST00000519587 UNC13BO14795 1591 aa21.1■□□□□ 0.97
SDC2-203ENST00000519587 SIGLEC1Q9BZZ2 1709 aa21.09■□□□□ 0.97
SDC2-203ENST00000519587 RAB3GAP2Q9H2M9 1393 aa21.09■□□□□ 0.97
SDC2-203ENST00000519587 MADDQ8WXG6 1647 aa21.07■□□□□ 0.96
SDC2-203ENST00000519587 PRDM15P57071 1507 aaPredicted RBP21.07■□□□□ 0.96
SDC2-203ENST00000519587 FAM135AQ9P2D6 1515 aa21.06■□□□□ 0.96
SDC2-203ENST00000519587 KIF3BO15066 747 aa21.05■□□□□ 0.96
SDC2-203ENST00000519587 ARID4BQ4LE39 1312 aaPredicted RBP21.04■□□□□ 0.96
SDC2-203ENST00000519587 ZC3H13Q5T200 1668 aaKnown RBP21.04■□□□□ 0.96
SDC2-203ENST00000519587 MROH1Q8NDA8 1641 aa21.03■□□□□ 0.96
SDC2-203ENST00000519587 KANK1Q14678 1352 aa21.02■□□□□ 0.96
SDC2-203ENST00000519587 HRCP23327 699 aa21.02■□□□□ 0.96
SDC2-203ENST00000519587 KDM5DQ9BY66 1539 aa21.02■□□□□ 0.96
SDC2-203ENST00000519587 IQGAP3Q86VI3 1631 aa21.01■□□□□ 0.95
SDC2-203ENST00000519587 RIMS1Q86UR5 1692 aaKnown RBP20.99■□□□□ 0.95
SDC2-203ENST00000519587 VWDEQ8N2E2 1590 aa20.97■□□□□ 0.95
SDC2-203ENST00000519587 PPP6R1Q9UPN7 881 aa20.97■□□□□ 0.95
SDC2-203ENST00000519587 CEP152O94986 1710 aa20.97■□□□□ 0.95
SDC2-203ENST00000519587 FER1L4A9Z1Z3 1794 aa20.97■□□□□ 0.95
SDC2-203ENST00000519587 GGT6Q6P531 493 aa20.96■□□□□ 0.95
SDC2-203ENST00000519587 TRIM52Q96A61 297 aa20.96■□□□□ 0.95
SDC2-203ENST00000519587 NUP155O75694 1391 aa20.96■□□□□ 0.95
SDC2-203ENST00000519587 TET3O43151 1660 aa20.96■□□□□ 0.95
SDC2-203ENST00000519587 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.95■□□□□ 0.941e-13■□□□□ 9.2
SDC2-203ENST00000519587 ABCC3O15438 1527 aa20.94■□□□□ 0.94
SDC2-203ENST00000519587 CERKQ8TCT0 537 aa20.94■□□□□ 0.94
SDC2-203ENST00000519587 CLTCQ00610 1675 aaKnown RBP20.93■□□□□ 0.94
SDC2-203ENST00000519587 SOCS7O14512 581 aa20.93■□□□□ 0.94
SDC2-203ENST00000519587 MLECQ14165 292 aa20.93■□□□□ 0.94
SDC2-203ENST00000519587 ESF1Q9H501 851 aaKnown RBP20.93■□□□□ 0.94
SDC2-203ENST00000519587 DISP3Q9P2K9 1392 aa20.93■□□□□ 0.94
SDC2-203ENST00000519587 CNTLNQ9NXG0 1405 aa20.93■□□□□ 0.94
SDC2-203ENST00000519587 LMTK2Q8IWU2 1503 aa20.93■□□□□ 0.94
SDC2-203ENST00000519587 CAMSAP1Q5T5Y3 1602 aa20.93■□□□□ 0.94
SDC2-203ENST00000519587 MROH2AA6NES4 1674 aa20.93■□□□□ 0.94
SDC2-203ENST00000519587 HSPA2P54652 639 aa20.92■□□□□ 0.94
SDC2-203ENST00000519587 ILDR2Q71H61 639 aa20.92■□□□□ 0.94
SDC2-203ENST00000519587 EFCAB6Q5THR3 1501 aa20.9■□□□□ 0.94
SDC2-203ENST00000519587 PZPP20742 1482 aa20.9■□□□□ 0.94
SDC2-203ENST00000519587 WASHC2CQ9Y4E1 1318 aa20.9■□□□□ 0.94
SDC2-203ENST00000519587 SLC4A1APQ9BWU0 796 aaKnown RBP20.86■□□□□ 0.93
SDC2-203ENST00000519587 RPRD2Q5VT52 1461 aaKnown RBP20.85■□□□□ 0.93
SDC2-203ENST00000519587 E9PCH4 1651 aa20.84■□□□□ 0.93
SDC2-203ENST00000519587 ARHGAP31Q2M1Z3 1444 aa20.82■□□□□ 0.92
SDC2-203ENST00000519587 PLPPR3Q6T4P5 718 aa20.82■□□□□ 0.92
SDC2-203ENST00000519587 MPHOSPH9Q99550 1183 aa20.81■□□□□ 0.92
SDC2-203ENST00000519587 SPATA31D1Q6ZQQ2 1576 aa20.8■□□□□ 0.92
SDC2-203ENST00000519587 C3P01024 1663 aa20.8■□□□□ 0.92
SDC2-203ENST00000519587 SPHKAPQ2M3C7 1700 aa20.79■□□□□ 0.92
SDC2-203ENST00000519587 PREX1Q8TCU6 1659 aa20.78■□□□□ 0.92
SDC2-203ENST00000519587 DHX57Q6P158 1386 aaKnown RBP20.78■□□□□ 0.92
SDC2-203ENST00000519587 NPATQ14207 1427 aa20.78■□□□□ 0.92
SDC2-203ENST00000519587 PKD2Q13563 968 aa20.77■□□□□ 0.92
SDC2-203ENST00000519587 ZMYM3Q14202 1370 aa20.75■□□□□ 0.91
SDC2-203ENST00000519587 CFAP65Q6ZU64 1925 aaKnown RBP20.74■□□□□ 0.91
SDC2-203ENST00000519587 ERVK-7P63135 1459 aa20.73■□□□□ 0.91
SDC2-203ENST00000519587 TRPM2O94759 1503 aa20.73■□□□□ 0.91
SDC2-203ENST00000519587 PTPRTO14522 1441 aa20.69■□□□□ 0.9
SDC2-203ENST00000519587 NOS1P29475 1434 aa20.69■□□□□ 0.9
SDC2-203ENST00000519587 CCER1Q8TC90 406 aaPredicted RBP20.68■□□□□ 0.9
SDC2-203ENST00000519587 CLSPNQ9HAW4 1339 aa20.68■□□□□ 0.9
SDC2-203ENST00000519587 SYNMO15061 1565 aa20.68■□□□□ 0.9
SDC2-203ENST00000519587 FOXD1Q16676 465 aa20.66■□□□□ 0.9
SDC2-203ENST00000519587 STRCQ7RTU9 1775 aa20.65■□□□□ 0.9
SDC2-203ENST00000519587 PIK3C2BO00750 1634 aa20.65■□□□□ 0.9
SDC2-203ENST00000519587 CCDC144AA2RUR9 1427 aa20.65■□□□□ 0.9
SDC2-203ENST00000519587 TNRQ92752 1358 aa20.65■□□□□ 0.9
SDC2-203ENST00000519587 ANKRD30BQ9BXX2 1392 aa20.65■□□□□ 0.9
SDC2-203ENST00000519587 CLTCL1P53675 1640 aa20.64■□□□□ 0.89
SDC2-203ENST00000519587 KIF1BO60333 1816 aa20.63■□□□□ 0.89
SDC2-203ENST00000519587 MYO3AQ8NEV4 1616 aa20.63■□□□□ 0.89
SDC2-203ENST00000519587 SETD1BQ9UPS6 1966 aaKnown RBP20.63■□□□□ 0.89
SDC2-203ENST00000519587 PLA2R1Q13018 1463 aa20.62■□□□□ 0.89
SDC2-203ENST00000519587 NLRP1Q9C000 1473 aa20.62■□□□□ 0.89
SDC2-203ENST00000519587 DMRT2Q9Y5R5 561 aa20.62■□□□□ 0.89
SDC2-203ENST00000519587 CEBPAP49715 358 aaPredicted RBP20.61■□□□□ 0.89
SDC2-203ENST00000519587 FBXO31Q5XUX0 539 aaPredicted RBP20.61■□□□□ 0.89
SDC2-203ENST00000519587 KDM5AP29375 1690 aaKnown RBP20.6■□□□□ 0.89
SDC2-203ENST00000519587 UGGT1Q9NYU2 1555 aa20.59■□□□□ 0.89
SDC2-203ENST00000519587 ZNF142P52746 1687 aaPredicted RBP20.59■□□□□ 0.89
SDC2-203ENST00000519587 SLC52A1Q9NWF4 448 aa20.59■□□□□ 0.89
SDC2-203ENST00000519587 ADGRB3O60242 1522 aa20.57■□□□□ 0.88
SDC2-203ENST00000519587 NEURL4Q96JN8 1562 aa20.55■□□□□ 0.88
SDC2-203ENST00000519587 CEP170BQ9Y4F5 1589 aaPredicted RBP20.55■□□□□ 0.88
SDC2-203ENST00000519587 UHRF1BP1Q6BDS2 1440 aa20.54■□□□□ 0.88
SDC2-203ENST00000519587 A2ML1A8K2U0 1454 aa20.54■□□□□ 0.88
SDC2-203ENST00000519587 UBR1Q8IWV7 1749 aa20.53■□□□□ 0.88
SDC2-203ENST00000519587 TMEM131LA2VDJ0 1609 aa20.52■□□□□ 0.88
SDC2-203ENST00000519587 MYO5BQ9ULV0 1848 aa20.51■□□□□ 0.87
SDC2-203ENST00000519587 IDI1Q13907 227 aa20.5■□□□□ 0.87
SDC2-203ENST00000519587 STAG3Q9UJ98 1225 aa20.5■□□□□ 0.87
SDC2-203ENST00000519587 IQSEC2Q5JU85 1478 aa20.5■□□□□ 0.87
SDC2-203ENST00000519587 LTBP4Q8N2S1 1624 aa20.49■□□□□ 0.87
SDC2-203ENST00000519587 SPATA31E1Q6ZUB1 1445 aa20.47■□□□□ 0.87
SDC2-203ENST00000519587 CHGAP10645 457 aaKnown RBP20.47■□□□□ 0.87
SDC2-203ENST00000519587 NEUROD1Q13562 356 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms