RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 MYO3AQ8NEV4 1616 aa17.1■□□□□ 0.33
PVT1-208ENST00000519481 KANK4Q5T7N3 995 aaPredicted RBP17.09■□□□□ 0.33
PVT1-208ENST00000519481 PLA2R1Q13018 1463 aa17.09■□□□□ 0.33
PVT1-208ENST00000519481 FAM135AQ9P2D6 1515 aa17.09■□□□□ 0.33
PVT1-208ENST00000519481 CEP170BQ9Y4F5 1589 aaPredicted RBP17.09■□□□□ 0.33
PVT1-208ENST00000519481 ZNF142P52746 1687 aaPredicted RBP17.08■□□□□ 0.32
PVT1-208ENST00000519481 MIA2Q96PC5 1412 aa17.08■□□□□ 0.32
PVT1-208ENST00000519481 KDM5DQ9BY66 1539 aa17.07■□□□□ 0.32
PVT1-208ENST00000519481 A2ML1A8K2U0 1454 aa17.06■□□□□ 0.32
PVT1-208ENST00000519481 MYOM3Q5VTT5 1437 aa17.06■□□□□ 0.32
PVT1-208ENST00000519481 TNRQ92752 1358 aa17.06■□□□□ 0.32
PVT1-208ENST00000519481 PZPP20742 1482 aa17.05■□□□□ 0.32
PVT1-208ENST00000519481 FBXO31Q5XUX0 539 aaPredicted RBP17.04■□□□□ 0.32
PVT1-208ENST00000519481 LTBP4Q8N2S1 1624 aa17.03■□□□□ 0.32
PVT1-208ENST00000519481 TCOF1Q13428 1488 aaKnown RBP17.03■□□□□ 0.32
PVT1-208ENST00000519481 IQSEC2Q5JU85 1478 aa17.03■□□□□ 0.32
PVT1-208ENST00000519481 MAST1Q9Y2H9 1570 aa17.02■□□□□ 0.32
PVT1-208ENST00000519481 ZNF335Q9H4Z2 1342 aaPredicted RBP17■□□□□ 0.31
PVT1-208ENST00000519481 THEMISQ8N1K5 641 aaPredicted RBP17■□□□□ 0.31
PVT1-208ENST00000519481 DNMT1P26358 1616 aaKnown RBP16.99■□□□□ 0.31
PVT1-208ENST00000519481 ANKLE2Q86XL3 938 aa16.98■□□□□ 0.31
PVT1-208ENST00000519481 NLRP1Q9C000 1473 aa16.98■□□□□ 0.31
PVT1-208ENST00000519481 RNF17Q9BXT8 1623 aaKnown RBP16.96■□□□□ 0.31
PVT1-208ENST00000519481 EIF2AK4Q9P2K8 1649 aaKnown RBP16.96■□□□□ 0.31
PVT1-208ENST00000519481 DUOX2Q9NRD8 1548 aa16.96■□□□□ 0.3
PVT1-208ENST00000519481 ABCC3O15438 1527 aa16.95■□□□□ 0.3
PVT1-208ENST00000519481 ZC3H13Q5T200 1668 aaKnown RBP16.94■□□□□ 0.3
PVT1-208ENST00000519481 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.94■□□□□ 0.3
PVT1-208ENST00000519481 KIF15Q9NS87 1388 aa16.94■□□□□ 0.3
PVT1-208ENST00000519481 UBAP1LF5GYI3 381 aa16.94■□□□□ 0.3
PVT1-208ENST00000519481 UGGT1Q9NYU2 1555 aa16.94■□□□□ 0.3
PVT1-208ENST00000519481 RRP7BPQ9NSQ0 103 aa16.93■□□□□ 0.3
PVT1-208ENST00000519481 SHANK2Q9UPX8 1470 aa16.93■□□□□ 0.3
PVT1-208ENST00000519481 PTPN23Q9H3S7 1636 aa16.92■□□□□ 0.3
PVT1-208ENST00000519481 ABCC5O15440 1437 aa16.92■□□□□ 0.3
PVT1-208ENST00000519481 POLR1AO95602 1720 aaPredicted RBP16.91■□□□□ 0.3
PVT1-208ENST00000519481 FGD6Q6ZV73 1430 aa16.91■□□□□ 0.3
PVT1-208ENST00000519481 ERBINQ96RT1 1412 aa16.9■□□□□ 0.3
PVT1-208ENST00000519481 ERVK-7P63135 1459 aa16.9■□□□□ 0.3
PVT1-208ENST00000519481 KANK1Q14678 1352 aa16.89■□□□□ 0.3
PVT1-208ENST00000519481 DISP3Q9P2K9 1392 aa16.89■□□□□ 0.3
PVT1-208ENST00000519481 SPATA31D1Q6ZQQ2 1576 aa16.89■□□□□ 0.3
PVT1-208ENST00000519481 DAPK1P53355 1430 aa16.89■□□□□ 0.29
PVT1-208ENST00000519481 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.89■□□□□ 0.298e-7■■■■□ 19.8
PVT1-208ENST00000519481 ANKRD30AQ9BXX3 1397 aa16.89■□□□□ 0.29
PVT1-208ENST00000519481 NPHP4O75161 1426 aaPredicted RBP16.87■□□□□ 0.29
PVT1-208ENST00000519481 CPS1P31327 1500 aa16.87■□□□□ 0.29
PVT1-208ENST00000519481 NEURL4Q96JN8 1562 aa16.87■□□□□ 0.29
PVT1-208ENST00000519481 CHIC2Q9UKJ5 165 aa16.87■□□□□ 0.29
PVT1-208ENST00000519481 MROH1Q8NDA8 1641 aa16.87■□□□□ 0.29
PVT1-208ENST00000519481 CROCC2H7BZ55 1655 aa16.87■□□□□ 0.29
PVT1-208ENST00000519481 CEP152O94986 1710 aa16.86■□□□□ 0.29
PVT1-208ENST00000519481 MED14O60244 1454 aa16.86■□□□□ 0.29
PVT1-208ENST00000519481 DEPDC5O75140 1603 aa16.85■□□□□ 0.29
PVT1-208ENST00000519481 TOM1O60784 492 aa16.85■□□□□ 0.29
PVT1-208ENST00000519481 ARHGAP31Q2M1Z3 1444 aa16.85■□□□□ 0.29
PVT1-208ENST00000519481 PRDM15P57071 1507 aaPredicted RBP16.85■□□□□ 0.29
PVT1-208ENST00000519481 SCAF1Q9H7N4 1312 aaKnown RBP16.84■□□□□ 0.29
PVT1-208ENST00000519481 CFAP65Q6ZU64 1925 aaKnown RBP16.84■□□□□ 0.29
PVT1-208ENST00000519481 FAM50AQ14320 339 aaKnown RBP16.83■□□□□ 0.28
PVT1-208ENST00000519481 STAG3Q9UJ98 1225 aa16.82■□□□□ 0.28
PVT1-208ENST00000519481 EID1Q9Y6B2 187 aa16.81■□□□□ 0.28
PVT1-208ENST00000519481 PIP4K2BP78356 416 aa16.8■□□□□ 0.28
PVT1-208ENST00000519481 IQGAP1P46940 1657 aa16.8■□□□□ 0.28
PVT1-208ENST00000519481 FOXD1Q16676 465 aa16.79■□□□□ 0.28
PVT1-208ENST00000519481 TXNDC2Q86VQ3 553 aa16.79■□□□□ 0.28
PVT1-208ENST00000519481 VWDEQ8N2E2 1590 aa16.79■□□□□ 0.28
PVT1-208ENST00000519481 SCAF11Q99590 1463 aaKnown RBP16.79■□□□□ 0.28
PVT1-208ENST00000519481 UBR1Q8IWV7 1749 aa16.77■□□□□ 0.28
PVT1-208ENST00000519481 ADGRL2O95490 1459 aa16.76■□□□□ 0.27
PVT1-208ENST00000519481 LMTK2Q8IWU2 1503 aa16.75■□□□□ 0.27
PVT1-208ENST00000519481 LTKP29376 864 aa16.75■□□□□ 0.27
PVT1-208ENST00000519481 ARHGAP23Q9P227 1491 aa16.74■□□□□ 0.27
PVT1-208ENST00000519481 SLIT1O75093 1534 aa16.74■□□□□ 0.27
PVT1-208ENST00000519481 ANKRD50Q9ULJ7 1429 aa16.73■□□□□ 0.27
PVT1-208ENST00000519481 ILDR2Q71H61 639 aa16.73■□□□□ 0.27
PVT1-208ENST00000519481 TMEM2Q9UHN6 1383 aa16.73■□□□□ 0.27
PVT1-208ENST00000519481 HSPA1LP34931 641 aa16.72■□□□□ 0.27
PVT1-208ENST00000519481 IDI1Q13907 227 aa16.72■□□□□ 0.27
PVT1-208ENST00000519481 PIK3C2BO00750 1634 aa16.71■□□□□ 0.27
PVT1-208ENST00000519481 SLC52A1Q9NWF4 448 aa16.71■□□□□ 0.27
PVT1-208ENST00000519481 EFCAB6Q5THR3 1501 aa16.7■□□□□ 0.26
PVT1-208ENST00000519481 LRRC7Q96NW7 1537 aa16.7■□□□□ 0.26
PVT1-208ENST00000519481 SYNMO15061 1565 aa16.69■□□□□ 0.26
PVT1-208ENST00000519481 NOS1P29475 1434 aa16.69■□□□□ 0.26
PVT1-208ENST00000519481 SOCS7O14512 581 aa16.68■□□□□ 0.26
PVT1-208ENST00000519481 RPRD2Q5VT52 1461 aaKnown RBP16.67■□□□□ 0.26
PVT1-208ENST00000519481 KDM5AP29375 1690 aaKnown RBP16.67■□□□□ 0.26
PVT1-208ENST00000519481 BCANQ96GW7 911 aa16.66■□□□□ 0.26
PVT1-208ENST00000519481 STRCP1A6NGW2 1772 aa16.65■□□□□ 0.26
PVT1-208ENST00000519481 HDGFP51858 240 aaKnown RBP16.65■□□□□ 0.26
PVT1-208ENST00000519481 ADGRB3O60242 1522 aa16.64■□□□□ 0.25
PVT1-208ENST00000519481 ROCK1Q13464 1354 aa16.64■□□□□ 0.25
PVT1-208ENST00000519481 PPP1R15AO75807 674 aaPredicted RBP16.62■□□□□ 0.25
PVT1-208ENST00000519481 KCNA6P17658 529 aa16.62■□□□□ 0.25
PVT1-208ENST00000519481 ITGAEP38570 1179 aa16.62■□□□□ 0.25
PVT1-208ENST00000519481 SLC26A8Q96RN1 970 aa16.62■□□□□ 0.25
PVT1-208ENST00000519481 TET3O43151 1660 aa16.62■□□□□ 0.25
PVT1-208ENST00000519481 CHGAP10645 457 aaKnown RBP16.6■□□□□ 0.25
PVT1-208ENST00000519481 PROSER2Q86WR7 435 aaPredicted RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 150 ms