RNA–Protein interactions for RNA: ENST00000518842.1

LAMA4-211, Transcript of laminin subunit alpha 4, humanhuman

TSL 3

Gene LAMA4, Length 480 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-211ENST00000518842 CCNB3Q8WWL7 1395 aa14.36□□□□□ -0.11
LAMA4-211ENST00000518842 VPS8Q8N3P4 1428 aa14.36□□□□□ -0.11
LAMA4-211ENST00000518842 ABCA6Q8N139 1617 aa14.35□□□□□ -0.11
LAMA4-211ENST00000518842 CFDP1Q9UEE9 299 aaPredicted RBP14.35□□□□□ -0.11
LAMA4-211ENST00000518842 PLEKHH2Q8IVE3 1493 aa14.35□□□□□ -0.11
LAMA4-211ENST00000518842 AGLP35573 1532 aa14.35□□□□□ -0.11
LAMA4-211ENST00000518842 SYCP2Q9BX26 1530 aa14.35□□□□□ -0.11
LAMA4-211ENST00000518842 TIAM1Q13009 1591 aa14.34□□□□□ -0.11
LAMA4-211ENST00000518842 RIMS1Q86UR5 1692 aaKnown RBP14.34□□□□□ -0.11
LAMA4-211ENST00000518842 CD44P16070 742 aaKnown RBP14.34□□□□□ -0.11
LAMA4-211ENST00000518842 LMTK3Q96Q04 1460 aa14.33□□□□□ -0.12
LAMA4-211ENST00000518842 MLECQ14165 292 aa14.33□□□□□ -0.12
LAMA4-211ENST00000518842 HNRNPMP52272 730 aaKnown RBP eCLIP14.32□□□□□ -0.12
LAMA4-211ENST00000518842 ZNF777Q9ULD5 760 aaPredicted RBP14.32□□□□□ -0.12
LAMA4-211ENST00000518842 KIDINS220Q9ULH0 1771 aa14.32□□□□□ -0.12
LAMA4-211ENST00000518842 MBD5Q9P267 1494 aa14.31□□□□□ -0.12
LAMA4-211ENST00000518842 LHX8Q68G74 356 aa14.31□□□□□ -0.12
LAMA4-211ENST00000518842 NCOA2Q15596 1464 aa14.31□□□□□ -0.12
LAMA4-211ENST00000518842 SPAG9O60271 1321 aaKnown RBP14.3□□□□□ -0.12
LAMA4-211ENST00000518842 ZNF644Q9H582 1327 aaPredicted RBP14.29□□□□□ -0.12
LAMA4-211ENST00000518842 MAP3K1Q13233 1512 aa14.29□□□□□ -0.12
LAMA4-211ENST00000518842 LRRC9Q6ZRR7 1453 aa14.28□□□□□ -0.12
LAMA4-211ENST00000518842 INO80Q9ULG1 1556 aaPredicted RBP14.28□□□□□ -0.12
LAMA4-211ENST00000518842 FER1L4A9Z1Z3 1794 aa14.27□□□□□ -0.12
LAMA4-211ENST00000518842 ATP7AQ04656 1500 aa14.27□□□□□ -0.12
LAMA4-211ENST00000518842 STAG3Q9UJ98 1225 aa14.27□□□□□ -0.13
LAMA4-211ENST00000518842 MYT1LQ9UL68 1186 aa14.27□□□□□ -0.13
LAMA4-211ENST00000518842 PLXNC1O60486 1568 aa14.26□□□□□ -0.13
LAMA4-211ENST00000518842 RTEL1-TNFRSF6BF6WH68 1400 aa14.24□□□□□ -0.13
LAMA4-211ENST00000518842 A2MP01023 1474 aa14.24□□□□□ -0.13
LAMA4-211ENST00000518842 SUPT6HQ7KZ85 1726 aaKnown RBP14.24□□□□□ -0.13
LAMA4-211ENST00000518842 CEBPAP49715 358 aaPredicted RBP14.23□□□□□ -0.13
LAMA4-211ENST00000518842 KANK4Q5T7N3 995 aaPredicted RBP14.23□□□□□ -0.13
LAMA4-211ENST00000518842 CNTLNQ9NXG0 1405 aa14.23□□□□□ -0.13
LAMA4-211ENST00000518842 CAMSAP2Q08AD1 1489 aa14.22□□□□□ -0.13
LAMA4-211ENST00000518842 CCDC141Q6ZP82 1450 aa14.21□□□□□ -0.13
LAMA4-211ENST00000518842 HSPA2P54652 639 aa14.21□□□□□ -0.13
LAMA4-211ENST00000518842 RSPH4AQ5TD94 716 aa14.19□□□□□ -0.14
LAMA4-211ENST00000518842 ARHGEF5Q12774 1597 aa14.18□□□□□ -0.14
LAMA4-211ENST00000518842 DHX29Q7Z478 1369 aaKnown RBP14.18□□□□□ -0.14
LAMA4-211ENST00000518842 MIA2Q96PC5 1412 aa14.17□□□□□ -0.14
LAMA4-211ENST00000518842 MYOM3Q5VTT5 1437 aa14.16□□□□□ -0.14
LAMA4-211ENST00000518842 NPATQ14207 1427 aa14.15□□□□□ -0.14
LAMA4-211ENST00000518842 UHRF1BP1Q6BDS2 1440 aa14.15□□□□□ -0.14
LAMA4-211ENST00000518842 C3P01024 1663 aa14.15□□□□□ -0.14
LAMA4-211ENST00000518842 PREX1Q8TCU6 1659 aa14.15□□□□□ -0.14
LAMA4-211ENST00000518842 ZMYM3Q14202 1370 aa14.15□□□□□ -0.14
LAMA4-211ENST00000518842 ILDR1Q86SU0 546 aaPredicted RBP14.15□□□□□ -0.14
LAMA4-211ENST00000518842 ADGBQ8N7X0 1667 aa14.14□□□□□ -0.15
LAMA4-211ENST00000518842 POTEIP0CG38 1075 aa14.14□□□□□ -0.15
LAMA4-211ENST00000518842 ZNF579Q8NAF0 562 aaKnown RBP14.14□□□□□ -0.15
LAMA4-211ENST00000518842 ESF1Q9H501 851 aaKnown RBP14.14□□□□□ -0.15
LAMA4-211ENST00000518842 MROH2AA6NES4 1674 aa14.14□□□□□ -0.15
LAMA4-211ENST00000518842 CREBZFQ9NS37 354 aa14.13□□□□□ -0.15
LAMA4-211ENST00000518842 MAST1Q9Y2H9 1570 aa14.12□□□□□ -0.15
LAMA4-211ENST00000518842 PTPRKQ15262 1439 aa14.11□□□□□ -0.15
LAMA4-211ENST00000518842 GGT6Q6P531 493 aa14.11□□□□□ -0.15
LAMA4-211ENST00000518842 SETD1BQ9UPS6 1966 aaKnown RBP14.11□□□□□ -0.15
LAMA4-211ENST00000518842 DCBLD2Q96PD2 775 aa14.1□□□□□ -0.15
LAMA4-211ENST00000518842 FAM135AQ9P2D6 1515 aa14.1□□□□□ -0.15
LAMA4-211ENST00000518842 SPDYE4A6NLX3 237 aa14.09□□□□□ -0.15
LAMA4-211ENST00000518842 TSPY4P0CV99 314 aa14.09□□□□□ -0.15
LAMA4-211ENST00000518842 TSPY10P0CW01 314 aa14.09□□□□□ -0.15
LAMA4-211ENST00000518842 ZRANB1Q9UGI0 708 aa14.09□□□□□ -0.15
LAMA4-211ENST00000518842 TCOF1Q13428 1488 aaKnown RBP14.07□□□□□ -0.16
LAMA4-211ENST00000518842 KIF3BO15066 747 aa14.07□□□□□ -0.16
LAMA4-211ENST00000518842 CLTCQ00610 1675 aaKnown RBP14.07□□□□□ -0.16
LAMA4-211ENST00000518842 ABCC5O15440 1437 aa14.07□□□□□ -0.16
LAMA4-211ENST00000518842 NCOA1Q15788 1441 aa14.07□□□□□ -0.16
LAMA4-211ENST00000518842 FGD6Q6ZV73 1430 aa14.07□□□□□ -0.16
LAMA4-211ENST00000518842 SHANK2Q9UPX8 1470 aa14.06□□□□□ -0.16
LAMA4-211ENST00000518842 KDM5DQ9BY66 1539 aa14.05□□□□□ -0.16
LAMA4-211ENST00000518842 PTPRTO14522 1441 aa14.05□□□□□ -0.16
LAMA4-211ENST00000518842 STRCQ7RTU9 1775 aa14.04□□□□□ -0.16
LAMA4-211ENST00000518842 FBXO41Q8TF61 875 aa14.04□□□□□ -0.16
LAMA4-211ENST00000518842 PZPP20742 1482 aa14.04□□□□□ -0.16
LAMA4-211ENST00000518842 RNF17Q9BXT8 1623 aaKnown RBP14.03□□□□□ -0.16
LAMA4-211ENST00000518842 PTPN23Q9H3S7 1636 aa14.02□□□□□ -0.16
LAMA4-211ENST00000518842 DAPK1P53355 1430 aa14.01□□□□□ -0.17
LAMA4-211ENST00000518842 PAK3O75914 559 aaPredicted RBP14.01□□□□□ -0.17
LAMA4-211ENST00000518842 ZNF142P52746 1687 aaPredicted RBP14.01□□□□□ -0.17
LAMA4-211ENST00000518842 MROH1Q8NDA8 1641 aa14.01□□□□□ -0.17
LAMA4-211ENST00000518842 MYO3AQ8NEV4 1616 aa14.01□□□□□ -0.17
LAMA4-211ENST00000518842 EIF2AK4Q9P2K8 1649 aaKnown RBP14.01□□□□□ -0.17
LAMA4-211ENST00000518842 CEP170BQ9Y4F5 1589 aaPredicted RBP14□□□□□ -0.17
LAMA4-211ENST00000518842 DUOX2Q9NRD8 1548 aa14□□□□□ -0.17
LAMA4-211ENST00000518842 PLA2R1Q13018 1463 aa14□□□□□ -0.17
LAMA4-211ENST00000518842 KIF15Q9NS87 1388 aa14□□□□□ -0.17
LAMA4-211ENST00000518842 WASHC2CQ9Y4E1 1318 aa14□□□□□ -0.17
LAMA4-211ENST00000518842 ABCC3O15438 1527 aa14□□□□□ -0.17
LAMA4-211ENST00000518842 A2ML1A8K2U0 1454 aa13.99□□□□□ -0.17
LAMA4-211ENST00000518842 TNRQ92752 1358 aa13.99□□□□□ -0.17
LAMA4-211ENST00000518842 FBXO31Q5XUX0 539 aaPredicted RBP13.99□□□□□ -0.17
LAMA4-211ENST00000518842 CAMSAP1Q5T5Y3 1602 aa13.99□□□□□ -0.17
LAMA4-211ENST00000518842 ERBINQ96RT1 1412 aa13.98□□□□□ -0.17
LAMA4-211ENST00000518842 DNMT1P26358 1616 aaKnown RBP13.98□□□□□ -0.17
LAMA4-211ENST00000518842 CERKQ8TCT0 537 aa13.98□□□□□ -0.17
LAMA4-211ENST00000518842 CROCC2H7BZ55 1655 aa13.97□□□□□ -0.17
LAMA4-211ENST00000518842 PRDM15P57071 1507 aaPredicted RBP13.95□□□□□ -0.18
LAMA4-211ENST00000518842 ADGRL2O95490 1459 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms