RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 NEURL4Q96JN8 1562 aa20.02■□□□□ 0.8
TRAPPC9-204ENST00000518723 PZPP20742 1482 aa20.01■□□□□ 0.79
TRAPPC9-204ENST00000518723 EHBP1L1Q8N3D4 1523 aa20.01■□□□□ 0.79
TRAPPC9-204ENST00000518723 CEP162Q5TB80 1403 aa20.01■□□□□ 0.79
TRAPPC9-204ENST00000518723 SHANK2Q9UPX8 1470 aa20■□□□□ 0.79
TRAPPC9-204ENST00000518723 TOM1O60784 492 aa20■□□□□ 0.79
TRAPPC9-204ENST00000518723 HSPA1LP34931 641 aa20■□□□□ 0.79
TRAPPC9-204ENST00000518723 KDM5DQ9BY66 1539 aa19.99■□□□□ 0.79
TRAPPC9-204ENST00000518723 FBXO31Q5XUX0 539 aaPredicted RBP19.99■□□□□ 0.79
TRAPPC9-204ENST00000518723 KIF3BO15066 747 aa19.98■□□□□ 0.79
TRAPPC9-204ENST00000518723 POLR1AO95602 1720 aaPredicted RBP19.98■□□□□ 0.79
TRAPPC9-204ENST00000518723 CCDC141Q6ZP82 1450 aa19.97■□□□□ 0.79
TRAPPC9-204ENST00000518723 MED1Q15648 1581 aaPredicted RBP19.96■□□□□ 0.79
TRAPPC9-204ENST00000518723 PIP4K2BP78356 416 aa19.96■□□□□ 0.79
TRAPPC9-204ENST00000518723 ANKLE2Q86XL3 938 aa19.96■□□□□ 0.79
TRAPPC9-204ENST00000518723 SCAF1Q9H7N4 1312 aaKnown RBP19.96■□□□□ 0.79
TRAPPC9-204ENST00000518723 NLRP1Q9C000 1473 aa19.95■□□□□ 0.78
TRAPPC9-204ENST00000518723 RSPH4AQ5TD94 716 aa19.95■□□□□ 0.78
TRAPPC9-204ENST00000518723 THEMISQ8N1K5 641 aaPredicted RBP19.95■□□□□ 0.78
TRAPPC9-204ENST00000518723 MIA2Q96PC5 1412 aa19.94■□□□□ 0.78
TRAPPC9-204ENST00000518723 MED14O60244 1454 aa19.94■□□□□ 0.78
TRAPPC9-204ENST00000518723 VWDEQ8N2E2 1590 aa19.94■□□□□ 0.78
TRAPPC9-204ENST00000518723 WASHC2CQ9Y4E1 1318 aa19.94■□□□□ 0.78
TRAPPC9-204ENST00000518723 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.94■□□□□ 0.78
TRAPPC9-204ENST00000518723 DEPDC5O75140 1603 aa19.91■□□□□ 0.78
TRAPPC9-204ENST00000518723 NPHP4O75161 1426 aaPredicted RBP19.91■□□□□ 0.78
TRAPPC9-204ENST00000518723 CAMSAP2Q08AD1 1489 aa19.91■□□□□ 0.78
TRAPPC9-204ENST00000518723 UGGT1Q9NYU2 1555 aa19.91■□□□□ 0.78
TRAPPC9-204ENST00000518723 ALKQ9UM73 1620 aa19.88■□□□□ 0.77
TRAPPC9-204ENST00000518723 NCOA2Q15596 1464 aa19.88■□□□□ 0.77
TRAPPC9-204ENST00000518723 ARHGEF5Q12774 1597 aa19.86■□□□□ 0.77
TRAPPC9-204ENST00000518723 TSPY4P0CV99 314 aa19.83■□□□□ 0.77
TRAPPC9-204ENST00000518723 TSPY10P0CW01 314 aa19.83■□□□□ 0.77
TRAPPC9-204ENST00000518723 IQGAP1P46940 1657 aa19.82■□□□□ 0.76
TRAPPC9-204ENST00000518723 RNF17Q9BXT8 1623 aaKnown RBP19.82■□□□□ 0.76
TRAPPC9-204ENST00000518723 ABCC3O15438 1527 aa19.81■□□□□ 0.76
TRAPPC9-204ENST00000518723 LRRC7Q96NW7 1537 aa19.81■□□□□ 0.76
TRAPPC9-204ENST00000518723 PHF23Q9BUL5 403 aaPredicted RBP19.8■□□□□ 0.76
TRAPPC9-204ENST00000518723 ERVK-7P63135 1459 aa19.79■□□□□ 0.76
TRAPPC9-204ENST00000518723 ZC3H13Q5T200 1668 aaKnown RBP19.79■□□□□ 0.76
TRAPPC9-204ENST00000518723 SYNMO15061 1565 aa19.78■□□□□ 0.76
TRAPPC9-204ENST00000518723 MAST1Q9Y2H9 1570 aa19.78■□□□□ 0.76
TRAPPC9-204ENST00000518723 STRCP1A6NGW2 1772 aa19.76■□□□□ 0.75
TRAPPC9-204ENST00000518723 EIF2AK4Q9P2K8 1649 aaKnown RBP19.76■□□□□ 0.75
TRAPPC9-204ENST00000518723 MROH1Q8NDA8 1641 aa19.73■□□□□ 0.75
TRAPPC9-204ENST00000518723 SCAF11Q99590 1463 aaKnown RBP19.73■□□□□ 0.75
TRAPPC9-204ENST00000518723 LRRC9Q6ZRR7 1453 aa19.71■□□□□ 0.75
TRAPPC9-204ENST00000518723 ARHGAP23Q9P227 1491 aa19.71■□□□□ 0.75
TRAPPC9-204ENST00000518723 UBR1Q8IWV7 1749 aa19.71■□□□□ 0.75
TRAPPC9-204ENST00000518723 SLIT1O75093 1534 aa19.7■□□□□ 0.74
TRAPPC9-204ENST00000518723 ARHGAP31Q2M1Z3 1444 aa19.68■□□□□ 0.74
TRAPPC9-204ENST00000518723 LTKP29376 864 aa19.68■□□□□ 0.74
TRAPPC9-204ENST00000518723 DUOX2Q9NRD8 1548 aa19.66■□□□□ 0.74
TRAPPC9-204ENST00000518723 TXNDC2Q86VQ3 553 aa19.66■□□□□ 0.74
TRAPPC9-204ENST00000518723 SENP3Q9H4L4 574 aaPredicted RBP19.66■□□□□ 0.74
TRAPPC9-204ENST00000518723 MYOM3Q5VTT5 1437 aa19.65■□□□□ 0.74
TRAPPC9-204ENST00000518723 CEP152O94986 1710 aa19.65■□□□□ 0.74
TRAPPC9-204ENST00000518723 RGS17Q9UGC6 210 aaPredicted RBP19.64■□□□□ 0.73
TRAPPC9-204ENST00000518723 VPS8Q8N3P4 1428 aa19.64■□□□□ 0.73
TRAPPC9-204ENST00000518723 PRDM15P57071 1507 aaPredicted RBP19.64■□□□□ 0.73
TRAPPC9-204ENST00000518723 FAM135BQ49AJ0 1406 aa19.63■□□□□ 0.73
TRAPPC9-204ENST00000518723 EID1Q9Y6B2 187 aa19.62■□□□□ 0.73
TRAPPC9-204ENST00000518723 MAP3K1Q13233 1512 aa19.61■□□□□ 0.73
TRAPPC9-204ENST00000518723 ERBINQ96RT1 1412 aa19.6■□□□□ 0.73
TRAPPC9-204ENST00000518723 KIF15Q9NS87 1388 aa19.6■□□□□ 0.73
TRAPPC9-204ENST00000518723 TMEM2Q9UHN6 1383 aa19.6■□□□□ 0.73
TRAPPC9-204ENST00000518723 XIRP1Q702N8 1843 aaKnown RBP19.59■□□□□ 0.73
TRAPPC9-204ENST00000518723 KANK4Q5T7N3 995 aaPredicted RBP19.58■□□□□ 0.72
TRAPPC9-204ENST00000518723 CFAP65Q6ZU64 1925 aaKnown RBP19.57■□□□□ 0.72
TRAPPC9-204ENST00000518723 PIK3C2BO00750 1634 aa19.56■□□□□ 0.72
TRAPPC9-204ENST00000518723 TMEM94Q12767 1356 aa19.56■□□□□ 0.72
TRAPPC9-204ENST00000518723 ABCC5O15440 1437 aa19.55■□□□□ 0.72
TRAPPC9-204ENST00000518723 KDM5AP29375 1690 aaKnown RBP19.55■□□□□ 0.72
TRAPPC9-204ENST00000518723 KCNA6P17658 529 aa19.54■□□□□ 0.72
TRAPPC9-204ENST00000518723 EFCAB6Q5THR3 1501 aa19.53■□□□□ 0.72
TRAPPC9-204ENST00000518723 LMTK2Q8IWU2 1503 aa19.53■□□□□ 0.72
TRAPPC9-204ENST00000518723 RRP7BPQ9NSQ0 103 aa19.53■□□□□ 0.72
TRAPPC9-204ENST00000518723 KANK1Q14678 1352 aa19.53■□□□□ 0.72
TRAPPC9-204ENST00000518723 STAG3Q9UJ98 1225 aa19.52■□□□□ 0.72
TRAPPC9-204ENST00000518723 IDI1Q13907 227 aa19.51■□□□□ 0.71
TRAPPC9-204ENST00000518723 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.51■□□□□ 0.71
TRAPPC9-204ENST00000518723 TET3O43151 1660 aa19.51■□□□□ 0.71
TRAPPC9-204ENST00000518723 CROCC2H7BZ55 1655 aa19.5■□□□□ 0.71
TRAPPC9-204ENST00000518723 POTEAQ6S8J7 498 aa19.5■□□□□ 0.71
TRAPPC9-204ENST00000518723 NKTRP30414 1462 aaKnown RBP19.48■□□□□ 0.71
TRAPPC9-204ENST00000518723 PROSER2Q86WR7 435 aaPredicted RBP19.48■□□□□ 0.71
TRAPPC9-204ENST00000518723 ROBO1Q9Y6N7 1651 aa19.48■□□□□ 0.71
TRAPPC9-204ENST00000518723 DAPK1P53355 1430 aa19.48■□□□□ 0.71
TRAPPC9-204ENST00000518723 SLC26A8Q96RN1 970 aa19.47■□□□□ 0.71
TRAPPC9-204ENST00000518723 NOS1P29475 1434 aa19.47■□□□□ 0.71
TRAPPC9-204ENST00000518723 NWD1Q149M9 1564 aa19.47■□□□□ 0.71
TRAPPC9-204ENST00000518723 PTPN23Q9H3S7 1636 aa19.46■□□□□ 0.71
TRAPPC9-204ENST00000518723 ADGRB3O60242 1522 aa19.45■□□□□ 0.7
TRAPPC9-204ENST00000518723 ANKRD30AQ9BXX3 1397 aa19.44■□□□□ 0.7
TRAPPC9-204ENST00000518723 RBM33Q96EV2 1170 aaKnown RBP19.43■□□□□ 0.7
TRAPPC9-204ENST00000518723 SLC52A1Q9NWF4 448 aa19.43■□□□□ 0.7
TRAPPC9-204ENST00000518723 MSH6P52701 1360 aa19.43■□□□□ 0.7
TRAPPC9-204ENST00000518723 FGD6Q6ZV73 1430 aa19.42■□□□□ 0.7
TRAPPC9-204ENST00000518723 LOC105371045A0A1W2PR82 267 aa19.4■□□□□ 0.7
TRAPPC9-204ENST00000518723 SLAIN2Q9P270 581 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms