RNA–Protein interactions for RNA: ENST00000518699.3

NKX6-3-201, Transcript of NK6 homeobox 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX6-3, Length 1,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3-201ENST00000518699 MADDQ8WXG6 1647 aa34.53■■■■□ 3.12
NKX6-3-201ENST00000518699 KIF3BO15066 747 aa34.52■■■■□ 3.12
NKX6-3-201ENST00000518699 UNC13BO14795 1591 aa34.51■■■■□ 3.12
NKX6-3-201ENST00000518699 ZC3H13Q5T200 1668 aaKnown RBP34.48■■■■□ 3.11
NKX6-3-201ENST00000518699 TRIM26Q12899 539 aaPredicted RBP34.48■■■■□ 3.11
NKX6-3-201ENST00000518699 KDM5DQ9BY66 1539 aa34.44■■■■□ 3.1
NKX6-3-201ENST00000518699 MLECQ14165 292 aa34.44■■■■□ 3.1
NKX6-3-201ENST00000518699 MROH2AA6NES4 1674 aa34.44■■■■□ 3.1
NKX6-3-201ENST00000518699 RIMS1Q86UR5 1692 aaKnown RBP34.44■■■■□ 3.1
NKX6-3-201ENST00000518699 VWDEQ8N2E2 1590 aa34.43■■■■□ 3.1
NKX6-3-201ENST00000518699 CLTCQ00610 1675 aaKnown RBP34.42■■■■□ 3.1
NKX6-3-201ENST00000518699 GGT6Q6P531 493 aa34.41■■■■□ 3.1
NKX6-3-201ENST00000518699 PPP6R1Q9UPN7 881 aa34.41■■■■□ 3.1
NKX6-3-201ENST00000518699 CNTLNQ9NXG0 1405 aa34.4■■■■□ 3.1
NKX6-3-201ENST00000518699 CEP152O94986 1710 aa34.39■■■■□ 3.1
NKX6-3-201ENST00000518699 ABCC3O15438 1527 aa34.38■■■■□ 3.09
NKX6-3-201ENST00000518699 SETD5Q9C0A6 1442 aa34.37■■■■□ 3.09
NKX6-3-201ENST00000518699 KDM4FA0A1W2PPD8 638 aa34.36■■■■□ 3.09
NKX6-3-201ENST00000518699 IQGAP3Q86VI3 1631 aa34.36■■■■□ 3.09
NKX6-3-201ENST00000518699 LMTK2Q8IWU2 1503 aa34.34■■■■□ 3.09
NKX6-3-201ENST00000518699 CAMSAP1Q5T5Y3 1602 aa34.32■■■■□ 3.08
NKX6-3-201ENST00000518699 KANK1Q14678 1352 aa34.32■■■■□ 3.08
NKX6-3-201ENST00000518699 C3P01024 1663 aa34.3■■■■□ 3.08
NKX6-3-201ENST00000518699 PTPRMP28827 1452 aa34.28■■■■□ 3.08
NKX6-3-201ENST00000518699 TET3O43151 1660 aa34.28■■■■□ 3.08
NKX6-3-201ENST00000518699 RAB3GAP2Q9H2M9 1393 aa34.27■■■■□ 3.08
NKX6-3-201ENST00000518699 ESF1Q9H501 851 aaKnown RBP34.26■■■■□ 3.08
NKX6-3-201ENST00000518699 WASHC2CQ9Y4E1 1318 aa34.25■■■■□ 3.07
NKX6-3-201ENST00000518699 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.24■■■■□ 3.07
NKX6-3-201ENST00000518699 EFCAB6Q5THR3 1501 aa34.24■■■■□ 3.07
NKX6-3-201ENST00000518699 ACIN1Q9UKV3 1341 aaKnown RBP34.22■■■■□ 3.07
NKX6-3-201ENST00000518699 NUP155O75694 1391 aa34.21■■■■□ 3.07
NKX6-3-201ENST00000518699 PZPP20742 1482 aa34.19■■■■□ 3.06
NKX6-3-201ENST00000518699 ZMYM3Q14202 1370 aa34.19■■■■□ 3.06
NKX6-3-201ENST00000518699 ARHGAP31Q2M1Z3 1444 aa34.18■■■■□ 3.06
NKX6-3-201ENST00000518699 HRCP23327 699 aa34.15■■■■□ 3.06
NKX6-3-201ENST00000518699 E9PCH4 1651 aa34.14■■■■□ 3.06
NKX6-3-201ENST00000518699 NPATQ14207 1427 aa34.12■■■■□ 3.05
NKX6-3-201ENST00000518699 RPRD2Q5VT52 1461 aaKnown RBP34.12■■■■□ 3.05
NKX6-3-201ENST00000518699 PREX1Q8TCU6 1659 aa34.11■■■■□ 3.05
NKX6-3-201ENST00000518699 SPATA31D1Q6ZQQ2 1576 aa34.09■■■■□ 3.05
NKX6-3-201ENST00000518699 TRIM52Q96A61 297 aa34.09■■■■□ 3.05
NKX6-3-201ENST00000518699 ERVK-7P63135 1459 aa34.06■■■■□ 3.04
NKX6-3-201ENST00000518699 CEBPAP49715 358 aaPredicted RBP34.04■■■■□ 3.04
NKX6-3-201ENST00000518699 CFAP65Q6ZU64 1925 aaKnown RBP34.01■■■■□ 3.04
NKX6-3-201ENST00000518699 PCGF6Q9BYE7 350 aa34■■■■□ 3.03
NKX6-3-201ENST00000518699 SETD1BQ9UPS6 1966 aaKnown RBP34■■■■□ 3.03
NKX6-3-201ENST00000518699 MYO3AQ8NEV4 1616 aa33.99■■■■□ 3.03
NKX6-3-201ENST00000518699 SPHKAPQ2M3C7 1700 aa33.99■■■■□ 3.03
NKX6-3-201ENST00000518699 NOS1P29475 1434 aa33.97■■■■□ 3.03
NKX6-3-201ENST00000518699 SLC4A1APQ9BWU0 796 aaKnown RBP33.97■■■■□ 3.03
NKX6-3-201ENST00000518699 SYNMO15061 1565 aa33.96■■■■□ 3.03
NKX6-3-201ENST00000518699 FBXO31Q5XUX0 539 aaPredicted RBP33.94■■■■□ 3.02
NKX6-3-201ENST00000518699 PLPPR3Q6T4P5 718 aa33.94■■■■□ 3.02
NKX6-3-201ENST00000518699 TNRQ92752 1358 aa33.94■■■■□ 3.02
NKX6-3-201ENST00000518699 ZNF142P52746 1687 aaPredicted RBP33.93■■■■□ 3.02
NKX6-3-201ENST00000518699 MPHOSPH9Q99550 1183 aa33.93■■■■□ 3.02
NKX6-3-201ENST00000518699 PTPRTO14522 1441 aa33.9■■■■□ 3.02
NKX6-3-201ENST00000518699 PKD2Q13563 968 aa33.89■■■■□ 3.02
NKX6-3-201ENST00000518699 PIK3C2BO00750 1634 aa33.89■■■■□ 3.02
NKX6-3-201ENST00000518699 TRPM2O94759 1503 aa33.89■■■■□ 3.02
NKX6-3-201ENST00000518699 NLRP1Q9C000 1473 aa33.88■■■■□ 3.01
NKX6-3-201ENST00000518699 CEP170BQ9Y4F5 1589 aaPredicted RBP33.85■■■■□ 3.01
NKX6-3-201ENST00000518699 UHRF1BP1Q6BDS2 1440 aa33.84■■■■□ 3.01
NKX6-3-201ENST00000518699 PLA2R1Q13018 1463 aa33.82■■■■□ 3
NKX6-3-201ENST00000518699 KDM5AP29375 1690 aaKnown RBP33.82■■■■□ 3
NKX6-3-201ENST00000518699 A2ML1A8K2U0 1454 aa33.8■■■■□ 3
NKX6-3-201ENST00000518699 LMTK3Q96Q04 1460 aa33.8■■■■□ 3
NKX6-3-201ENST00000518699 UGGT1Q9NYU2 1555 aa33.79■■■■□ 3
NKX6-3-201ENST00000518699 CLTCL1P53675 1640 aa33.78■■■■□ 3
NKX6-3-201ENST00000518699 AEBP2Q6ZN18 517 aaPredicted RBP33.77■■■■□ 3
NKX6-3-201ENST00000518699 UBR1Q8IWV7 1749 aa33.76■■■■□ 3
NKX6-3-201ENST00000518699 FOXD1Q16676 465 aa33.74■■■□□ 2.99
NKX6-3-201ENST00000518699 DHX57Q6P158 1386 aaKnown RBP33.74■■■□□ 2.99
NKX6-3-201ENST00000518699 ADGRB3O60242 1522 aa33.74■■■□□ 2.99
NKX6-3-201ENST00000518699 SLC52A1Q9NWF4 448 aa33.73■■■□□ 2.99
NKX6-3-201ENST00000518699 TMEM131LA2VDJ0 1609 aa33.69■■■□□ 2.98
NKX6-3-201ENST00000518699 KIF1BO60333 1816 aa33.69■■■□□ 2.98
NKX6-3-201ENST00000518699 ANKRD30BQ9BXX2 1392 aa33.68■■■□□ 2.98
NKX6-3-201ENST00000518699 IDI1Q13907 227 aa33.67■■■□□ 2.98
NKX6-3-201ENST00000518699 MYO5BQ9ULV0 1848 aa33.67■■■□□ 2.98
NKX6-3-201ENST00000518699 CCDC144AA2RUR9 1427 aa33.65■■■□□ 2.98
NKX6-3-201ENST00000518699 NEURL4Q96JN8 1562 aa33.61■■■□□ 2.97
NKX6-3-201ENST00000518699 SLIT1O75093 1534 aa33.57■■■□□ 2.96
NKX6-3-201ENST00000518699 ARHGAP23Q9P227 1491 aa33.55■■■□□ 2.96
NKX6-3-201ENST00000518699 POLR1AO95602 1720 aaPredicted RBP33.54■■■□□ 2.96
NKX6-3-201ENST00000518699 THEMISQ8N1K5 641 aaPredicted RBP33.53■■■□□ 2.96
NKX6-3-201ENST00000518699 STAG3Q9UJ98 1225 aa33.51■■■□□ 2.96
NKX6-3-201ENST00000518699 SPATA31E1Q6ZUB1 1445 aa33.51■■■□□ 2.95
NKX6-3-201ENST00000518699 HSPA2P54652 639 aa33.48■■■□□ 2.95
NKX6-3-201ENST00000518699 TMEM2Q9UHN6 1383 aa33.48■■■□□ 2.95
NKX6-3-201ENST00000518699 STRCQ7RTU9 1775 aa33.48■■■□□ 2.95
NKX6-3-201ENST00000518699 ZFYVE9O95405 1425 aa33.46■■■□□ 2.95
NKX6-3-201ENST00000518699 IFT172Q9UG01 1749 aa33.45■■■□□ 2.95
NKX6-3-201ENST00000518699 NEXMIFQ5QGS0 1516 aa33.44■■■□□ 2.94
NKX6-3-201ENST00000518699 CHGAP10645 457 aaKnown RBP33.44■■■□□ 2.94
NKX6-3-201ENST00000518699 PPLO60437 1756 aa33.44■■■□□ 2.94
NKX6-3-201ENST00000518699 SCAF11Q99590 1463 aaKnown RBP33.41■■■□□ 2.94
NKX6-3-201ENST00000518699 RIMS2Q9UQ26 1411 aa33.4■■■□□ 2.94
NKX6-3-201ENST00000518699 CLSPNQ9HAW4 1339 aa33.37■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 127.8 ms