RNA–Protein interactions for RNA: ENST00000518678.1

TRAM1-202, Transcript of translocation associated membrane protein 1, humanhuman

TSL 4

Gene TRAM1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-202ENST00000518678 EIF2AK4Q9P2K8 1649 aaKnown RBP26.72■■□□□ 1.87
TRAM1-202ENST00000518678 GCC2Q8IWJ2 1684 aa26.71■■□□□ 1.87
TRAM1-202ENST00000518678 HSPA2P54652 639 aa26.71■■□□□ 1.87
TRAM1-202ENST00000518678 HFM1A2PYH4 1435 aa26.71■■□□□ 1.87
TRAM1-202ENST00000518678 NAIPQ13075 1403 aa26.7■■□□□ 1.86
TRAM1-202ENST00000518678 ANKRD50Q9ULJ7 1429 aa26.7■■□□□ 1.86
TRAM1-202ENST00000518678 C3P01024 1663 aa26.66■■□□□ 1.86
TRAM1-202ENST00000518678 KIF3BO15066 747 aa26.65■■□□□ 1.86
TRAM1-202ENST00000518678 ILDR1Q86SU0 546 aaPredicted RBP26.63■■□□□ 1.85
TRAM1-202ENST00000518678 RNF17Q9BXT8 1623 aaKnown RBP26.63■■□□□ 1.85
TRAM1-202ENST00000518678 PREX1Q8TCU6 1659 aa26.62■■□□□ 1.85
TRAM1-202ENST00000518678 DEPDC5O75140 1603 aa26.59■■□□□ 1.85
TRAM1-202ENST00000518678 GGT6Q6P531 493 aa26.58■■□□□ 1.85
TRAM1-202ENST00000518678 MROH1Q8NDA8 1641 aa26.57■■□□□ 1.84
TRAM1-202ENST00000518678 SETD5Q9C0A6 1442 aa26.57■■□□□ 1.84
TRAM1-202ENST00000518678 PRDM15P57071 1507 aaPredicted RBP26.55■■□□□ 1.84
TRAM1-202ENST00000518678 UNC13BO14795 1591 aa26.54■■□□□ 1.84
TRAM1-202ENST00000518678 CLTCQ00610 1675 aaKnown RBP26.54■■□□□ 1.84
TRAM1-202ENST00000518678 PPP6R1Q9UPN7 881 aa26.53■■□□□ 1.84
TRAM1-202ENST00000518678 FAM135AQ9P2D6 1515 aa26.51■■□□□ 1.83
TRAM1-202ENST00000518678 KDM5DQ9BY66 1539 aa26.49■■□□□ 1.83
TRAM1-202ENST00000518678 RAB3GAP2Q9H2M9 1393 aa26.49■■□□□ 1.83
TRAM1-202ENST00000518678 VWDEQ8N2E2 1590 aa26.49■■□□□ 1.83
TRAM1-202ENST00000518678 STRCQ7RTU9 1775 aa26.48■■□□□ 1.83
TRAM1-202ENST00000518678 KANK1Q14678 1352 aa26.48■■□□□ 1.83
TRAM1-202ENST00000518678 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.48■■□□□ 1.833e-7■■□□□ 12.8
TRAM1-202ENST00000518678 MROH2AA6NES4 1674 aa26.47■■□□□ 1.83
TRAM1-202ENST00000518678 ZC3H13Q5T200 1668 aaKnown RBP26.47■■□□□ 1.83
TRAM1-202ENST00000518678 CNTLNQ9NXG0 1405 aa26.46■■□□□ 1.83
TRAM1-202ENST00000518678 ABCC3O15438 1527 aa26.45■■□□□ 1.83
TRAM1-202ENST00000518678 ESF1Q9H501 851 aaKnown RBP26.45■■□□□ 1.82
TRAM1-202ENST00000518678 SETD1BQ9UPS6 1966 aaKnown RBP26.45■■□□□ 1.82
TRAM1-202ENST00000518678 ACIN1Q9UKV3 1341 aaKnown RBP26.44■■□□□ 1.82
TRAM1-202ENST00000518678 WASHC2CQ9Y4E1 1318 aa26.44■■□□□ 1.82
TRAM1-202ENST00000518678 PCGF6Q9BYE7 350 aa26.44■■□□□ 1.82
TRAM1-202ENST00000518678 CEP152O94986 1710 aa26.44■■□□□ 1.82
TRAM1-202ENST00000518678 IQGAP3Q86VI3 1631 aa26.43■■□□□ 1.82
TRAM1-202ENST00000518678 UHRF1BP1Q6BDS2 1440 aa26.43■■□□□ 1.82
TRAM1-202ENST00000518678 HRCP23327 699 aa26.43■■□□□ 1.82
TRAM1-202ENST00000518678 NUP155O75694 1391 aa26.43■■□□□ 1.82
TRAM1-202ENST00000518678 LMTK2Q8IWU2 1503 aa26.42■■□□□ 1.82
TRAM1-202ENST00000518678 ZMYM3Q14202 1370 aa26.39■■□□□ 1.82
TRAM1-202ENST00000518678 TRIM52Q96A61 297 aa26.39■■□□□ 1.82
TRAM1-202ENST00000518678 CAMSAP1Q5T5Y3 1602 aa26.38■■□□□ 1.81
TRAM1-202ENST00000518678 TET3O43151 1660 aa26.36■■□□□ 1.81
TRAM1-202ENST00000518678 PZPP20742 1482 aa26.35■■□□□ 1.81
TRAM1-202ENST00000518678 EFCAB6Q5THR3 1501 aa26.34■■□□□ 1.81
TRAM1-202ENST00000518678 MYO3AQ8NEV4 1616 aa26.33■■□□□ 1.81
TRAM1-202ENST00000518678 ARHGAP31Q2M1Z3 1444 aa26.32■■□□□ 1.8
TRAM1-202ENST00000518678 NPATQ14207 1427 aa26.28■■□□□ 1.8
TRAM1-202ENST00000518678 SLC4A1APQ9BWU0 796 aaKnown RBP26.27■■□□□ 1.8
TRAM1-202ENST00000518678 E9PCH4 1651 aa26.27■■□□□ 1.8
TRAM1-202ENST00000518678 ZNF142P52746 1687 aaPredicted RBP26.26■■□□□ 1.79
TRAM1-202ENST00000518678 RPRD2Q5VT52 1461 aaKnown RBP26.26■■□□□ 1.79
TRAM1-202ENST00000518678 MPHOSPH9Q99550 1183 aa26.26■■□□□ 1.79
TRAM1-202ENST00000518678 FBXO41Q8TF61 875 aa26.23■■□□□ 1.79
TRAM1-202ENST00000518678 CEP170BQ9Y4F5 1589 aaPredicted RBP26.22■■□□□ 1.79
TRAM1-202ENST00000518678 PKD2Q13563 968 aa26.21■■□□□ 1.79
TRAM1-202ENST00000518678 FBXO31Q5XUX0 539 aaPredicted RBP26.21■■□□□ 1.79
TRAM1-202ENST00000518678 ERVK-7P63135 1459 aa26.21■■□□□ 1.79
TRAM1-202ENST00000518678 SPATA31D1Q6ZQQ2 1576 aa26.2■■□□□ 1.79
TRAM1-202ENST00000518678 CFAP65Q6ZU64 1925 aaKnown RBP26.18■■□□□ 1.78
TRAM1-202ENST00000518678 NOS1P29475 1434 aa26.17■■□□□ 1.78
TRAM1-202ENST00000518678 NCKAP5LQ9HCH0 1330 aa26.16■■□□□ 1.78
TRAM1-202ENST00000518678 CERKQ8TCT0 537 aa26.16■■□□□ 1.78
TRAM1-202ENST00000518678 TNRQ92752 1358 aa26.14■■□□□ 1.78
TRAM1-202ENST00000518678 SPHKAPQ2M3C7 1700 aa26.14■■□□□ 1.77
TRAM1-202ENST00000518678 PTPRTO14522 1441 aa26.14■■□□□ 1.77
TRAM1-202ENST00000518678 SYNMO15061 1565 aa26.12■■□□□ 1.77
TRAM1-202ENST00000518678 FOXD1Q16676 465 aa26.12■■□□□ 1.77
TRAM1-202ENST00000518678 DHX57Q6P158 1386 aaKnown RBP26.09■■□□□ 1.77
TRAM1-202ENST00000518678 A2ML1A8K2U0 1454 aa26.09■■□□□ 1.77
TRAM1-202ENST00000518678 PLA2R1Q13018 1463 aa26.09■■□□□ 1.77
TRAM1-202ENST00000518678 TRPM2O94759 1503 aa26.09■■□□□ 1.77
TRAM1-202ENST00000518678 LTBP4Q8N2S1 1624 aa26.08■■□□□ 1.77
TRAM1-202ENST00000518678 DMRT2Q9Y5R5 561 aa26.08■■□□□ 1.77
TRAM1-202ENST00000518678 NLRP1Q9C000 1473 aa26.06■■□□□ 1.76
TRAM1-202ENST00000518678 PIK3C2BO00750 1634 aa26.05■■□□□ 1.76
TRAM1-202ENST00000518678 SLC52A1Q9NWF4 448 aa26.04■■□□□ 1.76
TRAM1-202ENST00000518678 UGGT1Q9NYU2 1555 aa26.03■■□□□ 1.76
TRAM1-202ENST00000518678 POLR1AO95602 1720 aaPredicted RBP26.02■■□□□ 1.76
TRAM1-202ENST00000518678 ANKRD30BQ9BXX2 1392 aa26.02■■□□□ 1.76
TRAM1-202ENST00000518678 NEURL4Q96JN8 1562 aa26.02■■□□□ 1.76
TRAM1-202ENST00000518678 CLTCL1P53675 1640 aa26.01■■□□□ 1.75
TRAM1-202ENST00000518678 IDI1Q13907 227 aa26■■□□□ 1.75
TRAM1-202ENST00000518678 ZNF335Q9H4Z2 1342 aaPredicted RBP25.99■■□□□ 1.75
TRAM1-202ENST00000518678 CCDC144AA2RUR9 1427 aa25.97■■□□□ 1.75
TRAM1-202ENST00000518678 KDM5AP29375 1690 aaKnown RBP25.95■■□□□ 1.74
TRAM1-202ENST00000518678 UBR1Q8IWV7 1749 aa25.94■■□□□ 1.74
TRAM1-202ENST00000518678 ADGRB3O60242 1522 aa25.94■■□□□ 1.74
TRAM1-202ENST00000518678 TMEM131LA2VDJ0 1609 aa25.92■■□□□ 1.74
TRAM1-202ENST00000518678 KIF1BO60333 1816 aa25.91■■□□□ 1.74
TRAM1-202ENST00000518678 STAG3Q9UJ98 1225 aa25.89■■□□□ 1.74
TRAM1-202ENST00000518678 MYO5BQ9ULV0 1848 aa25.87■■□□□ 1.73
TRAM1-202ENST00000518678 THEMISQ8N1K5 641 aaPredicted RBP25.87■■□□□ 1.73
TRAM1-202ENST00000518678 CHGAP10645 457 aaKnown RBP25.86■■□□□ 1.73
TRAM1-202ENST00000518678 SPATA31E1Q6ZUB1 1445 aa25.83■■□□□ 1.73
TRAM1-202ENST00000518678 CCER1Q8TC90 406 aaPredicted RBP25.82■■□□□ 1.72
TRAM1-202ENST00000518678 CLSPNQ9HAW4 1339 aa25.82■■□□□ 1.72
TRAM1-202ENST00000518678 IQGAP1P46940 1657 aa25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms